Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
12:41:30 (4138168): wrapper (7.7.26015): starting
12:41:30 (4138168): wrapper: running run_atlas (--nthreads 4)
[2024-07-03 12:41:30] Arguments: --nthreads 4
[2024-07-03 12:41:30] Threads: 4
[2024-07-03 12:41:30] Checking for CVMFS
[2024-07-03 12:41:33] Probing /cvmfs/atlas.cern.ch... OK
[2024-07-03 12:41:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-07-03 12:41:36] Running cvmfs_config stat atlas.cern.ch
[2024-07-03 12:41:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-07-03 12:41:36] 2.11.2.0 4138399 0 25404 134566 3 1 3921888 4096000 0 130560 0 0 0.000 1141 474 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-07-03 12:41:36] CVMFS is ok
[2024-07-03 12:41:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-07-03 12:41:36] Small home clusters do not require a local http proxy but it is suggested if
[2024-07-03 12:41:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-07-03 12:41:36] Further information can be found at the LHC@home message board.
[2024-07-03 12:41:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-07-03 12:41:37] Checking for apptainer binary...
[2024-07-03 12:41:37] Using apptainer found in PATH at /usr/bin/apptainer
[2024-07-03 12:41:37] Running /usr/bin/apptainer --version
[2024-07-03 12:41:37] apptainer version 1.2.5
[2024-07-03 12:41:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-07-03 12:41:37] Ryzen-9-5950X-Zen3-Ubu23
[2024-07-03 12:41:37] apptainer works
[2024-07-03 12:41:37] Set ATHENA_PROC_NUMBER=4
[2024-07-03 12:41:37] Set ATHENA_CORE_NUMBER=4
[2024-07-03 12:41:37] Starting ATLAS job with PandaID=6252345422
[2024-07-03 12:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/32 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-07-03 13:20:20]  *** The last 200 lines of the pilot log: ***
[2024-07-03 13:20:20]  filetype=log
[2024-07-03 13:20:20]  guid=66937aa3-6e88-4995-ab6c-becf2f6fc01c
[2024-07-03 13:20:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-07-03 13:20:20]  is_tar=False
[2024-07-03 13:20:20]  lfn=5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz
[2024-07-03 13:20:20]  mtime=0
[2024-07-03 13:20:20]  protocol_id=None
[2024-07-03 13:20:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-07-03 13:20:20]  replicas=None
[2024-07-03 13:20:20]  scope=hc_test
[2024-07-03 13:20:20]  status=None
[2024-07-03 13:20:20]  status_code=0
[2024-07-03 13:20:20]  storage_token=
[2024-07-03 13:20:20]  surl=/var/lib/boinc-client/slots/32/PanDA_Pilot-6252345422/5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz
[2024-07-03 13:20:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c2/da/5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz
[2024-07-03 13:20:20]  workdir=None
[2024-07-03 13:20:20] ]
[2024-07-03 13:20:20] 2024-07-03 11:19:53,185 | INFO     | transferring file 5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz from /var/lib/boinc-client/slots/32/PanDA_Pilot-6252345422/5bddc45e-bd53-42e0-8eca-7bb93
[2024-07-03 13:20:20] 2024-07-03 11:19:53,186 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/32/PanDA_Pilot-6252345422/5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz /var/lib/boinc-cl
[2024-07-03 13:20:20] 2024-07-03 11:19:53,206 | INFO     | adding to output.list: 5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c2/da/5bddc45e-bd53-
[2024-07-03 13:20:20] 2024-07-03 11:19:53,207 | INFO     | summary of transferred files:
[2024-07-03 13:20:20] 2024-07-03 11:19:53,207 | INFO     |  -- lfn=5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz, status_code=0, status=transferred
[2024-07-03 13:20:20] 2024-07-03 11:19:53,207 | INFO     | stage-out finished correctly
[2024-07-03 13:20:20] 2024-07-03 11:19:53,244 | INFO     | monitor loop #186: job 0:6252345422 is in state 'finished'
[2024-07-03 13:20:20] 2024-07-03 11:19:53,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 13:20:20] 2024-07-03 11:19:53,920 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-07-03 13:20:20] 2024-07-03 11:19:55,767 | INFO     | monitor loop #187: job 0:6252345422 is in state 'finished'
[2024-07-03 13:20:20] 2024-07-03 11:19:55,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 13:20:20] 2024-07-03 11:19:56,035 | INFO     | job 6252345422 has state=finished
[2024-07-03 13:20:20] 2024-07-03 11:19:56,035 | INFO     | preparing for final server update for job 6252345422 in state='finished'
[2024-07-03 13:20:20] 2024-07-03 11:19:56,036 | INFO     | this job has now completed (state=finished)
[2024-07-03 13:20:20] 2024-07-03 11:19:56,036 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-07-03 13:20:20] 2024-07-03 11:19:56,036 | INFO     | job 6252345422 has finished - writing final server update
[2024-07-03 13:20:20] 2024-07-03 11:19:56,036 | INFO     | total number of processed events: 2 (read)
[2024-07-03 13:20:20] 2024-07-03 11:19:56,039 | INFO     | executing command: lscpu
[2024-07-03 13:20:20] 2024-07-03 11:19:56,074 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-07-03 13:20:20] 2024-07-03 11:19:56,074 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-07-03 13:20:20] 2024-07-03 11:19:56,112 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-07-03 13:20:20] 2024-07-03 11:19:58,270 | INFO     | monitor loop #188: job 0:6252345422 is in state 'finished'
[2024-07-03 13:20:20] 2024-07-03 11:19:58,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 13:20:20] 2024-07-03 11:20:00,774 | INFO     | monitor loop #189: job 0:6252345422 is in state 'finished'
[2024-07-03 13:20:20] 2024-07-03 11:20:00,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 13:20:20] 2024-07-03 11:20:03,276 | INFO     | monitor loop #190: job 0:6252345422 is in state 'finished'
[2024-07-03 13:20:20] 2024-07-03 11:20:03,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,604 | INFO     | CPU arch script returned: x86-64-v3
[2024-07-03 13:20:20] 2024-07-03 11:20:04,604 | INFO     | using path: /var/lib/boinc-client/slots/32/PanDA_Pilot-6252345422/memory_monitor_summary.json (trf name=prmon)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,605 | INFO     | extracted standard info from prmon json
[2024-07-03 13:20:20] 2024-07-03 11:20:04,605 | INFO     | extracted standard memory fields from prmon json
[2024-07-03 13:20:20] 2024-07-03 11:20:04,605 | WARNING  | GPU info not found in prmon json
[2024-07-03 13:20:20] 2024-07-03 11:20:04,606 | INFO     | fitting pss+swap vs Time
[2024-07-03 13:20:20] 2024-07-03 11:20:04,606 | INFO     | model: linear, x: [1720003670.0, 1720003731.0, 1720003792.0, 1720003853.0, 1720003914.0, 1720003975.0, 1720004036.0, 1720004097.0, 1720004158.0, 1720004219.0, 1720
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | sum of square deviations: 8362947.5
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | sum of deviations: 2155434786.5
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | mean x: 1720004554.5
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | mean y: 1025209.9666666667
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | -- intersect: -443306510764.3695
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | intersect: -443306510764.3695
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | chi2: 0.8561812460097373
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | -- intersect: -443306510764.3695
[2024-07-03 13:20:20] 2024-07-03 11:20:04,607 | INFO     | current memory leak: 257.74 B/s (using 30 data points, chi2=0.86)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | ..............................
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . Timing measurements:
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . get job = 0 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . initial setup = 1 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . payload setup = 18 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . stage-in = 0 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . payload execution = 2227 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . stage-out = 0 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | . log creation = 0 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,608 | INFO     | ..............................
[2024-07-03 13:20:20] 2024-07-03 11:20:04,676 | INFO     | 
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | job summary report
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | --------------------------------------------------
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | PanDA job id: 6252345422
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | task id: NULL
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | errors: (none)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | status: LOG_TRANSFER = DONE 
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | pilot state: finished 
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | transexitcode: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | exeerrorcode: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | exeerrordiag: 
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | exitcode: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | exitmsg: OK
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | cpuconsumptiontime: 366 s
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | nevents: 2
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | neventsw: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | pid: 4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:04,677 | INFO     | pgrp: 4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | corecount: 4
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | event service: False
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | sizes: {0: 2404222, 4: 2404428, 11: 2404456, 2250: 2424725, 2252: 2433791, 2253: 2433847, 2263: 2434197}
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | --------------------------------------------------
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | 
[2024-07-03 13:20:20] 2024-07-03 11:20:04,678 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/32
[2024-07-03 13:20:20] 2024-07-03 11:20:04,700 | INFO     | queue jobs had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue data_in had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue data_out had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue completed_jobids has 1 job(s)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | queue messages had 0 job(s) [purged]
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | job 6252345422 has completed (purged errors)
[2024-07-03 13:20:20] 2024-07-03 11:20:04,702 | INFO     | overall cleanup function is called
[2024-07-03 13:20:20] 2024-07-03 11:20:05,707 | INFO     | --- collectZombieJob: --- 10, [4149943]
[2024-07-03 13:20:20] 2024-07-03 11:20:05,707 | INFO     | zombie collector waiting for pid 4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:05,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-07-03 13:20:20] 2024-07-03 11:20:06,711 | INFO     | collected zombie processes
[2024-07-03 13:20:20] 2024-07-03 11:20:06,711 | INFO     | will now attempt to kill all subprocesses of pid=4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:06,774 | INFO     | process IDs to be killed: [4149943] (in reverse order)
[2024-07-03 13:20:20] 2024-07-03 11:20:06,829 | WARNING  | found no corresponding commands to process id(s)
[2024-07-03 13:20:20] 2024-07-03 11:20:06,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-07-03 13:20:20] 2024-07-03 11:20:06,832 | INFO     | did not find any defunct processes belonging to 4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:06,836 | INFO     | did not find any defunct processes belonging to 4149943
[2024-07-03 13:20:20] 2024-07-03 11:20:06,836 | INFO     | ready for new job
[2024-07-03 13:20:20] 2024-07-03 11:20:06,836 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-07-03 13:20:20] 2024-07-03 11:20:06,837 | INFO     | *************************************
[2024-07-03 13:20:20] 2024-07-03 11:20:06,838 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-07-03 13:20:20] 2024-07-03 11:20:06,838 | INFO     | *************************************
[2024-07-03 13:20:20] 2024-07-03 11:20:06,838 | INFO     | 
[2024-07-03 13:20:20] 2024-07-03 11:20:06,839 | INFO     | architecture information:
[2024-07-03 13:20:20] 2024-07-03 11:20:06,840 | INFO     | executing command: cat /etc/os-release
[2024-07-03 13:20:20] 2024-07-03 11:20:06,856 | INFO     | cat /etc/os-release:
[2024-07-03 13:20:20] NAME="CentOS Linux"
[2024-07-03 13:20:20] VERSION="7 (Core)"
[2024-07-03 13:20:20] ID="centos"
[2024-07-03 13:20:20] ID_LIKE="rhel fedora"
[2024-07-03 13:20:20] VERSION_ID="7"
[2024-07-03 13:20:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-07-03 13:20:20] ANSI_COLOR="0;31"
[2024-07-03 13:20:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-07-03 13:20:20] HOME_URL="https://www.centos.org/"
[2024-07-03 13:20:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-07-03 13:20:20] 
[2024-07-03 13:20:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-07-03 13:20:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-07-03 13:20:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-07-03 13:20:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-07-03 13:20:20] 
[2024-07-03 13:20:20] 2024-07-03 11:20:06,856 | INFO     | *************************************
[2024-07-03 13:20:20] 2024-07-03 11:20:07,359 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/32
[2024-07-03 13:20:20] 2024-07-03 11:20:07,378 | INFO     | sufficient remaining disk space (1992144453632 B)
[2024-07-03 13:20:20] 2024-07-03 11:20:07,378 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-07-03 13:20:20] 2024-07-03 11:20:07,378 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-07-03 13:20:20] 2024-07-03 11:20:07,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-07-03 13:20:20] 2024-07-03 11:20:07,378 | INFO     | aborting loop
[2024-07-03 13:20:20] 2024-07-03 11:20:07,727 | INFO     | all data control threads have been joined
[2024-07-03 13:20:20] 2024-07-03 11:20:07,739 | INFO     | all payload control threads have been joined
[2024-07-03 13:20:20] 2024-07-03 11:20:08,184 | INFO     | all job control threads have been joined
[2024-07-03 13:20:20] 2024-07-03 11:20:08,315 | INFO     | found 0 job(s) in 20 queues
[2024-07-03 13:20:20] 2024-07-03 11:20:08,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-07-03 13:20:20] 2024-07-03 11:20:08,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-07-03 13:20:20] 2024-07-03 11:20:08,383 | INFO     | [job] retrieve thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,383 | INFO     | [job] job monitor thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,387 | INFO     | [payload] run_realtimelog thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,395 | INFO     | [payload] failed_post thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,655 | INFO     | [job] validate thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,731 | INFO     | [data] control thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,743 | INFO     | [payload] control thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,799 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-07-03 13:20:20] 2024-07-03 11:20:08,887 | INFO     | [job] create_data_payload thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,899 | INFO     | [payload] execute_payloads thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,931 | INFO     | [payload] validate_pre thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,967 | INFO     | [payload] validate_post thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:08,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-07-03 13:20:20] 2024-07-03 11:20:09,187 | INFO     | [job] control thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:09,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-07-03 13:20:20] 2024-07-03 11:20:09,795 | INFO     | [data] copytool_in thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:10,692 | INFO     | [job] queue monitor thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:10,803 | INFO     | [data] copytool_out thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:12,995 | INFO     | [data] queue_monitor thread has finished
[2024-07-03 13:20:20] 2024-07-03 11:20:15,059 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123567535531840)>', '<ExcThread(monitor, started 123567031162624)>']
[2024-07-03 13:20:20] 2024-07-03 11:20:15,343 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-07-03 13:20:20] 2024-07-03 11:20:15,343 | INFO     | [monitor] control thread has ended
[2024-07-03 13:20:20] 2024-07-03 11:20:20,083 | INFO     | all workflow threads have been joined
[2024-07-03 13:20:20] 2024-07-03 11:20:20,087 | INFO     | end of generic workflow (traces error code: 0)
[2024-07-03 13:20:20] 2024-07-03 11:20:20,087 | INFO     | traces error code: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:20,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-07-03 13:20:20] 2024-07-03 11:20:20,227 [wrapper] ==== pilot stdout END ====
[2024-07-03 13:20:20] 2024-07-03 11:20:20,230 [wrapper] ==== wrapper stdout RESUME ====
[2024-07-03 13:20:20] 2024-07-03 11:20:20,233 [wrapper] pilotpid: 4142602
[2024-07-03 13:20:20] 2024-07-03 11:20:20,236 [wrapper] Pilot exit status: 0
[2024-07-03 13:20:20] 2024-07-03 11:20:20,245 [wrapper] pandaids: 6252345422
[2024-07-03 13:20:20] 2024-07-03 11:20:20,277 [wrapper] cleanup supervisor_pilot 4158308 4142603
[2024-07-03 13:20:20] 2024-07-03 11:20:20,280 [wrapper] Test setup, not cleaning
[2024-07-03 13:20:20] 2024-07-03 11:20:20,283 [wrapper] ==== wrapper stdout END ====
[2024-07-03 13:20:20] 2024-07-03 11:20:20,286 [wrapper] ==== wrapper stderr END ====
[2024-07-03 13:20:20] 2024-07-03 11:20:20,295 [wrapper] apfmon messages muted
[2024-07-03 13:20:20]  *** Error codes and diagnostics ***
[2024-07-03 13:20:20]     "exeErrorCode": 0,
[2024-07-03 13:20:20]     "exeErrorDiag": "",
[2024-07-03 13:20:20]     "pilotErrorCode": 0,
[2024-07-03 13:20:20]     "pilotErrorDiag": "",
[2024-07-03 13:20:20]  *** Listing of results directory ***
[2024-07-03 13:20:20] total 43588
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc   469766 Jul  3 12:37 pilot3.tar.gz
[2024-07-03 13:20:20] -rwx------ 1 boinc boinc    32220 Jul  3 12:41 runpilot2-wrapper.sh
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc     4409 Jul  3 12:41 queuedata.json
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc      100 Jul  3 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-07-03 13:20:20] -rwxr-xr-x 1 boinc boinc     7986 Jul  3 12:41 run_atlas
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc      105 Jul  3 12:41 job.xml
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc 37727106 Jul  3 12:41 EVNT.04972714._000037.pool.root.1
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc    17614 Jul  3 12:41 start_atlas.sh
[2024-07-03 13:20:20] drwxrwx--x 2 boinc boinc     4096 Jul  3 12:41 shared
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc   482524 Jul  3 12:41 input.tar.gz
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc     6774 Jul  3 12:41 init_data.xml
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc        0 Jul  3 12:41 boinc_lockfile
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc     2772 Jul  3 12:41 pandaJob.out
[2024-07-03 13:20:20] -rw------- 1 boinc boinc      424 Jul  3 12:41 setup.sh.local
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1030133 Jul  3 12:42 agis_schedconf.cvmfs.json
[2024-07-03 13:20:20] -rw------- 1 boinc boinc        0 Jul  3 12:42 agis_ddmendpoints.agis.ALL.json
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1328502 Jul  3 12:42 cric_ddmendpoints.json
[2024-07-03 13:20:20] drwx------ 4 boinc boinc     4096 Jul  3 12:42 pilot3
[2024-07-03 13:20:20] -rw------- 1 boinc boinc       95 Jul  3 13:19 pilot_heartbeat.json
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc      526 Jul  3 13:19 boinc_task_state.xml
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1257600 Jul  3 13:19 output.1.5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.pool.root
[2024-07-03 13:20:20] -rw------- 1 boinc boinc     1006 Jul  3 13:19 memory_monitor_summary.json
[2024-07-03 13:20:20] -rw------- 1 boinc boinc   164349 Jul  3 13:19 5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log.tgz
[2024-07-03 13:20:20] -rw------- 1 boinc boinc     6649 Jul  3 13:20 heartbeat.json
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc     8192 Jul  3 13:20 boinc_mmap_file
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc       25 Jul  3 13:20 wrapper_checkpoint.txt
[2024-07-03 13:20:20] -rw------- 1 boinc boinc     4221 Jul  3 13:20 pilotlog.txt
[2024-07-03 13:20:20] -rw------- 1 boinc boinc   257955 Jul  3 13:20 5bddc45e-bd53-42e0-8eca-7bb93b47c281_82859.1.job.log
[2024-07-03 13:20:20] -rw------- 1 boinc boinc      464 Jul  3 13:20 output.list
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc      748 Jul  3 13:20 runtime_log
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1699840 Jul  3 13:20 result.tar.gz
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc    12164 Jul  3 13:20 runtime_log.err
[2024-07-03 13:20:20] -rw------- 1 boinc boinc      638 Jul  3 13:20 idhLDmQbCj5n7Olcko1bjSoqABFKDmABFKDmOtvXDm9HsKDmhRpeAo.diag
[2024-07-03 13:20:20] -rw-r--r-- 1 boinc boinc    21630 Jul  3 13:20 stderr.txt
[2024-07-03 13:20:20] HITS file was successfully produced:
[2024-07-03 13:20:20] -rw------- 1 boinc boinc 1257600 Jul  3 13:19 shared/HITS.pool.root.1
[2024-07-03 13:20:20]  *** Contents of shared directory: ***
[2024-07-03 13:20:20] total 40232
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc 37727106 Jul  3 12:41 ATLAS.root_0
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc    17614 Jul  3 12:41 start_atlas.sh
[2024-07-03 13:20:20] -rw-r--r-- 2 boinc boinc   482524 Jul  3 12:41 input.tar.gz
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1257600 Jul  3 13:19 HITS.pool.root.1
[2024-07-03 13:20:20] -rw------- 1 boinc boinc  1699840 Jul  3 13:20 result.tar.gz
13:20:21 (4138168): run_atlas exited; CPU time 346.702159
13:20:21 (4138168): called boinc_finish(0)

</stderr_txt>
]]>

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