Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
00:20:14 (95249): wrapper (7.7.26015): starting
00:20:14 (95249): wrapper: running run_atlas (--nthreads 12)
[2024-06-30 00:20:14] Arguments: --nthreads 12
[2024-06-30 00:20:14] Threads: 12
[2024-06-30 00:20:14] Checking for CVMFS
[2024-06-30 00:20:14] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-30 00:20:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-30 00:20:14] Running cvmfs_config stat atlas.cern.ch
[2024-06-30 00:20:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-30 00:20:14] 2.10.1.0 1641 246526 124620 134455 2 93 44415945 45568000 7214 130560 0 1447336542 99.768 899860686 19123 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-30 00:20:14] CVMFS is ok
[2024-06-30 00:20:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-30 00:20:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-30 00:20:14] Further information can be found at the LHC@home message board.
[2024-06-30 00:20:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-30 00:20:14] Checking for apptainer binary...
[2024-06-30 00:20:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-30 00:20:14] Running /usr/bin/apptainer --version
[2024-06-30 00:20:14] apptainer version 1.3.2-1.el7
[2024-06-30 00:20:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-30 00:20:16] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0071.triumf.lcg
[2024-06-30 00:20:16] apptainer works
[2024-06-30 00:20:16] Set ATHENA_PROC_NUMBER=12
[2024-06-30 00:20:16] Set ATHENA_CORE_NUMBER=12
[2024-06-30 00:20:16] Starting ATLAS job with PandaID=6249264295
[2024-06-30 00:20:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-30 01:32:19]  *** The last 200 lines of the pilot log: ***
[2024-06-30 01:32:19]  direct_access_lan=False
[2024-06-30 01:32:19]  direct_access_wan=False
[2024-06-30 01:32:19]  domain=
[2024-06-30 01:32:19]  filesize=353556
[2024-06-30 01:32:19]  filetype=log
[2024-06-30 01:32:19]  guid=d1e5f21c-704d-4e44-9d0e-5e91c2e13827
[2024-06-30 01:32:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-30 01:32:19]  is_tar=False
[2024-06-30 01:32:19]  lfn=log.40024014._002184.job.log.tgz.1
[2024-06-30 01:32:19]  mtime=0
[2024-06-30 01:32:19]  protocol_id=None
[2024-06-30 01:32:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-30 01:32:19]  replicas=None
[2024-06-30 01:32:19]  scope=mc23_13p6TeV
[2024-06-30 01:32:19]  status=None
[2024-06-30 01:32:19]  status_code=0
[2024-06-30 01:32:19]  storage_token=
[2024-06-30 01:32:19]  surl=/home/boinc/slots/0/PanDA_Pilot-6249264295/log.40024014._002184.job.log.tgz.1
[2024-06-30 01:32:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/d3/log.40024014._002184.job.log.tgz.1
[2024-06-30 01:32:19]  workdir=None
[2024-06-30 01:32:19] ]
[2024-06-30 01:32:19] 2024-06-30 08:31:53,115 | INFO     | transferring file log.40024014._002184.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6249264295/log.40024014._002184.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-30 01:32:19] 2024-06-30 08:31:53,115 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6249264295/log.40024014._002184.job.log.tgz.1 /home/boinc/slots/0/log.40024014._002184.job.log.t
[2024-06-30 01:32:19] 2024-06-30 08:31:53,141 | INFO     | adding to output.list: log.40024014._002184.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/d3/log.40024014._002184.job.log.tg
[2024-06-30 01:32:19] 2024-06-30 08:31:53,142 | INFO     | summary of transferred files:
[2024-06-30 01:32:19] 2024-06-30 08:31:53,142 | INFO     |  -- lfn=log.40024014._002184.job.log.tgz.1, status_code=0, status=transferred
[2024-06-30 01:32:19] 2024-06-30 08:31:53,142 | INFO     | stage-out finished correctly
[2024-06-30 01:32:19] 2024-06-30 08:31:53,194 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-30 01:32:19] 2024-06-30 08:31:54,262 | INFO     | job 6249264295 has state=finished
[2024-06-30 01:32:19] 2024-06-30 08:31:54,262 | INFO     | preparing for final server update for job 6249264295 in state='finished'
[2024-06-30 01:32:19] 2024-06-30 08:31:54,263 | INFO     | this job has now completed (state=finished)
[2024-06-30 01:32:19] 2024-06-30 08:31:54,263 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-30 01:32:19] 2024-06-30 08:31:54,263 | INFO     | job 6249264295 has finished - writing final server update
[2024-06-30 01:32:19] 2024-06-30 08:31:54,263 | INFO     | total number of processed events: 400 (read)
[2024-06-30 01:32:19] 2024-06-30 08:31:54,267 | INFO     | executing command: lscpu
[2024-06-30 01:32:19] 2024-06-30 08:31:54,330 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-30 01:32:19] 2024-06-30 08:31:54,330 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-30 01:32:19] 2024-06-30 08:31:54,384 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-30 01:32:19] 2024-06-30 08:31:57,861 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-30 01:32:19] 2024-06-30 08:31:57,866 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6249264295/memory_monitor_summary.json (trf name=prmon)
[2024-06-30 01:32:19] 2024-06-30 08:31:57,868 | INFO     | extracted standard info from prmon json
[2024-06-30 01:32:19] 2024-06-30 08:31:57,868 | INFO     | extracted standard memory fields from prmon json
[2024-06-30 01:32:19] 2024-06-30 08:31:57,868 | WARNING  | GPU info not found in prmon json
[2024-06-30 01:32:19] 2024-06-30 08:31:57,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-30 01:32:19] 2024-06-30 08:31:57,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | fitting pss+swap vs Time
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | model: linear, x: [1719732350.0, 1719732411.0, 1719732472.0, 1719732533.0, 1719732594.0, 1719732655.0, 1719732716.0, 1719732777.0, 1719732838.0, 1719732899.0, 1719
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | sum of square deviations: 77515872.0
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | sum of deviations: 19013917953.0
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | mean x: 1719734241.0
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | mean y: 2741984.698412698
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | -- intersect: -421831972837.81854
[2024-06-30 01:32:19] 2024-06-30 08:31:57,870 | INFO     | intersect: -421831972837.81854
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | chi2: 2.395155826952453
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | -- intersect: -421831972837.81854
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | current memory leak: 245.29 B/s (using 63 data points, chi2=2.40)
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | ..............................
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . Timing measurements:
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . get job = 0 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . initial setup = 2 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . payload setup = 4 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . stage-in = 0 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . payload execution = 4267 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . stage-out = 0 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,871 | INFO     | . log creation = 0 s
[2024-06-30 01:32:19] 2024-06-30 08:31:57,872 | INFO     | ..............................
[2024-06-30 01:32:19] 2024-06-30 08:31:57,968 | WARNING  | process 105310 is no longer using CPU - aborting
[2024-06-30 01:32:19] 2024-06-30 08:31:57,968 | INFO     | aborting job monitoring since job object (job id=6249264295) has expired
[2024-06-30 01:32:19] 2024-06-30 08:31:58,025 | INFO     | 
[2024-06-30 01:32:19] 2024-06-30 08:31:58,025 | INFO     | job summary report
[2024-06-30 01:32:19] 2024-06-30 08:31:58,025 | INFO     | --------------------------------------------------
[2024-06-30 01:32:19] 2024-06-30 08:31:58,025 | INFO     | PanDA job id: 6249264295
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | task id: 40024014
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | errors: (none)
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | pilot state: finished 
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | transexitcode: 0
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | exeerrorcode: 0
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | exeerrordiag: 
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | exitcode: 0
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | exitmsg: OK
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | cpuconsumptiontime: 39384 s
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | nevents: 400
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | neventsw: 0
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | pid: 105310
[2024-06-30 01:32:19] 2024-06-30 08:31:58,026 | INFO     | pgrp: 105310
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | corecount: 12
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | event service: False
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | sizes: {0: 2386005, 1: 2386940, 4: 2387146, 11: 2387174, 4275: 2413164, 4276: 2422302, 4280: 2422416}
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | --------------------------------------------------
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | 
[2024-06-30 01:32:19] 2024-06-30 08:31:58,027 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,055 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-30 01:32:19] 2024-06-30 08:31:58,056 | INFO     | job 6249264295 has completed (purged errors)
[2024-06-30 01:32:19] 2024-06-30 08:31:58,056 | INFO     | overall cleanup function is called
[2024-06-30 01:32:19] 2024-06-30 08:31:59,063 | INFO     | --- collectZombieJob: --- 10, [105310]
[2024-06-30 01:32:19] 2024-06-30 08:31:59,064 | INFO     | zombie collector waiting for pid 105310
[2024-06-30 01:32:19] 2024-06-30 08:31:59,064 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-30 01:32:19] 2024-06-30 08:32:00,069 | INFO     | collected zombie processes
[2024-06-30 01:32:19] 2024-06-30 08:32:00,070 | INFO     | will now attempt to kill all subprocesses of pid=105310
[2024-06-30 01:32:19] 2024-06-30 08:32:00,191 | INFO     | process IDs to be killed: [105310] (in reverse order)
[2024-06-30 01:32:19] 2024-06-30 08:32:00,260 | WARNING  | found no corresponding commands to process id(s)
[2024-06-30 01:32:19] 2024-06-30 08:32:00,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-30 01:32:19] 2024-06-30 08:32:00,265 | INFO     | did not find any defunct processes belonging to 105310
[2024-06-30 01:32:19] 2024-06-30 08:32:00,268 | INFO     | did not find any defunct processes belonging to 105310
[2024-06-30 01:32:19] 2024-06-30 08:32:00,268 | INFO     | ready for new job
[2024-06-30 01:32:19] 2024-06-30 08:32:00,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-30 01:32:19] 2024-06-30 08:32:00,269 | INFO     | *************************************
[2024-06-30 01:32:19] 2024-06-30 08:32:00,269 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-30 01:32:19] 2024-06-30 08:32:00,270 | INFO     | *************************************
[2024-06-30 01:32:19] 2024-06-30 08:32:00,270 | INFO     | 
[2024-06-30 01:32:19] 2024-06-30 08:32:00,272 | INFO     | architecture information:
[2024-06-30 01:32:19] 2024-06-30 08:32:00,272 | INFO     | executing command: cat /etc/os-release
[2024-06-30 01:32:19] 2024-06-30 08:32:00,291 | INFO     | cat /etc/os-release:
[2024-06-30 01:32:19] NAME="CentOS Linux"
[2024-06-30 01:32:19] VERSION="7 (Core)"
[2024-06-30 01:32:19] ID="centos"
[2024-06-30 01:32:19] ID_LIKE="rhel fedora"
[2024-06-30 01:32:19] VERSION_ID="7"
[2024-06-30 01:32:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-30 01:32:19] ANSI_COLOR="0;31"
[2024-06-30 01:32:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-30 01:32:19] HOME_URL="https://www.centos.org/"
[2024-06-30 01:32:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-30 01:32:19] 
[2024-06-30 01:32:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-30 01:32:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-30 01:32:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-30 01:32:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-30 01:32:19] 
[2024-06-30 01:32:19] 2024-06-30 08:32:00,291 | INFO     | *************************************
[2024-06-30 01:32:19] 2024-06-30 08:32:00,794 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-30 01:32:19] 2024-06-30 08:32:00,819 | INFO     | sufficient remaining disk space (2000202760192 B)
[2024-06-30 01:32:19] 2024-06-30 08:32:00,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-30 01:32:19] 2024-06-30 08:32:00,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-30 01:32:19] 2024-06-30 08:32:00,820 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-30 01:32:19] 2024-06-30 08:32:00,821 | INFO     | found 0 job(s) in 20 queues
[2024-06-30 01:32:19] 2024-06-30 08:32:00,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-30 01:32:19] 2024-06-30 08:32:00,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-30 01:32:19] 2024-06-30 08:32:00,949 | INFO     | all job control threads have been joined
[2024-06-30 01:32:19] 2024-06-30 08:32:01,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-30 01:32:19] 2024-06-30 08:32:01,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-30 01:32:19] 2024-06-30 08:32:01,477 | INFO     | aborting loop
[2024-06-30 01:32:19] 2024-06-30 08:32:01,825 | INFO     | [job] retrieve thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:01,874 | INFO     | all data control threads have been joined
[2024-06-30 01:32:19] 2024-06-30 08:32:01,915 | INFO     | [job] validate thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:01,954 | INFO     | [job] control thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,093 | INFO     | all payload control threads have been joined
[2024-06-30 01:32:19] 2024-06-30 08:32:02,188 | INFO     | [job] create_data_payload thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,276 | INFO     | [payload] execute_payloads thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,346 | INFO     | [data] copytool_in thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,366 | INFO     | [payload] failed_post thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,482 | INFO     | [job] job monitor thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,837 | INFO     | [payload] validate_pre thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,875 | INFO     | [data] control thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,919 | INFO     | [payload] validate_post thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:02,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-30 01:32:19] 2024-06-30 08:32:03,096 | INFO     | [payload] control thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:03,219 | INFO     | [data] copytool_out thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:03,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-30 01:32:19] 2024-06-30 08:32:03,934 | INFO     | [job] queue monitor thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:07,759 | INFO     | [data] queue_monitor thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:11,264 | INFO     | job.realtimelogging is not enabled
[2024-06-30 01:32:19] 2024-06-30 08:32:12,265 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-30 01:32:19] 2024-06-30 08:32:12,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996573796160)>', '<ExcThread(monitor, started 139996349355776)>']
[2024-06-30 01:32:19] 2024-06-30 08:32:12,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-30 01:32:19] 2024-06-30 08:32:12,857 | INFO     | [monitor] control thread has ended
[2024-06-30 01:32:19] 2024-06-30 08:32:17,641 | INFO     | all workflow threads have been joined
[2024-06-30 01:32:19] 2024-06-30 08:32:17,641 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-30 01:32:19] 2024-06-30 08:32:17,642 | INFO     | traces error code: 0
[2024-06-30 01:32:19] 2024-06-30 08:32:17,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-30 01:32:19] 2024-06-30 08:32:17,759 [wrapper] ==== pilot stdout END ====
[2024-06-30 01:32:19] 2024-06-30 08:32:17,762 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-30 01:32:19] 2024-06-30 08:32:17,765 [wrapper] pilotpid: 98879
[2024-06-30 01:32:19] 2024-06-30 08:32:17,769 [wrapper] Pilot exit status: 0
[2024-06-30 01:32:19] 2024-06-30 08:32:17,778 [wrapper] pandaids: 6249264295
[2024-06-30 01:32:19] 2024-06-30 08:32:17,815 [wrapper] cleanup supervisor_pilot 165152 98880
[2024-06-30 01:32:19] 2024-06-30 08:32:17,819 [wrapper] Test setup, not cleaning
[2024-06-30 01:32:19] 2024-06-30 08:32:17,823 [wrapper] ==== wrapper stdout END ====
[2024-06-30 01:32:19] 2024-06-30 08:32:17,827 [wrapper] ==== wrapper stderr END ====
[2024-06-30 01:32:19] 2024-06-30 08:32:17,833 [wrapper] apfmon messages muted
[2024-06-30 01:32:19]  *** Error codes and diagnostics ***
[2024-06-30 01:32:19]     "exeErrorCode": 0,
[2024-06-30 01:32:19]     "exeErrorDiag": "",
[2024-06-30 01:32:19]     "pilotErrorCode": 0,
[2024-06-30 01:32:19]     "pilotErrorDiag": "",
[2024-06-30 01:32:19]  *** Listing of results directory ***
[2024-06-30 01:32:19] total 839396
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc    469766 Jun 29 22:41 pilot3.tar.gz
[2024-06-30 01:32:19] -rwx------ 1 boinc boinc     32220 Jun 29 22:52 runpilot2-wrapper.sh
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc      5654 Jun 29 22:52 queuedata.json
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc       100 Jun 30 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-30 01:32:19] -rwxr-xr-x 1 boinc boinc      7986 Jun 30 00:20 run_atlas
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc       105 Jun 30 00:20 job.xml
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc 592180321 Jun 30 00:20 EVNT.40024012._000057.pool.root.1
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc      6626 Jun 30 00:20 init_data.xml
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc     17537 Jun 30 00:20 start_atlas.sh
[2024-06-30 01:32:19] drwxrwx--x 2 boinc boinc      4096 Jun 30 00:20 shared
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc    482475 Jun 30 00:20 input.tar.gz
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc         0 Jun 30 00:20 boinc_lockfile
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc      2513 Jun 30 00:20 pandaJob.out
[2024-06-30 01:32:19] -rw------- 1 boinc boinc       424 Jun 30 00:20 setup.sh.local
[2024-06-30 01:32:19] -rw------- 1 boinc boinc   1032177 Jun 30 00:20 agis_schedconf.cvmfs.json
[2024-06-30 01:32:19] -rw------- 1 boinc boinc         0 Jun 30 00:20 agis_ddmendpoints.agis.ALL.json
[2024-06-30 01:32:19] -rw------- 1 boinc boinc   1321378 Jun 30 00:20 cric_ddmendpoints.json
[2024-06-30 01:32:19] drwx------ 4 boinc boinc      4096 Jun 30 00:20 pilot3
[2024-06-30 01:32:19] -rw------- 1 boinc boinc 262296899 Jun 30 01:31 HITS.40024014._002184.pool.root.1
[2024-06-30 01:32:19] -rw------- 1 boinc boinc        95 Jun 30 01:31 pilot_heartbeat.json
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc       530 Jun 30 01:31 boinc_task_state.xml
[2024-06-30 01:32:19] -rw------- 1 boinc boinc      1043 Jun 30 01:31 memory_monitor_summary.json
[2024-06-30 01:32:19] -rw------- 1 boinc boinc    353556 Jun 30 01:31 log.40024014._002184.job.log.tgz.1
[2024-06-30 01:32:19] -rw------- 1 boinc boinc      7752 Jun 30 01:31 heartbeat.json
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc        27 Jun 30 01:32 wrapper_checkpoint.txt
[2024-06-30 01:32:19] -rw------- 1 boinc boinc      4405 Jun 30 01:32 pilotlog.txt
[2024-06-30 01:32:19] -rw------- 1 boinc boinc    408963 Jun 30 01:32 log.40024014._002184.job.log.1
[2024-06-30 01:32:19] -rw------- 1 boinc boinc       357 Jun 30 01:32 output.list
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc       620 Jun 30 01:32 runtime_log
[2024-06-30 01:32:19] -rw------- 1 boinc boinc    778240 Jun 30 01:32 result.tar.gz
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc     11286 Jun 30 01:32 runtime_log.err
[2024-06-30 01:32:19] -rw------- 1 boinc boinc       653 Jun 30 01:32 jxaMDmlf2h5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmTMpKDmPDrbDo.diag
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc      8192 Jun 30 01:32 boinc_mmap_file
[2024-06-30 01:32:19] -rw-r--r-- 1 boinc boinc     21327 Jun 30 01:32 stderr.txt
[2024-06-30 01:32:19] HITS file was successfully produced:
[2024-06-30 01:32:19] -rw------- 1 boinc boinc 262296899 Jun 30 01:31 shared/HITS.pool.root.1
[2024-06-30 01:32:19]  *** Contents of shared directory: ***
[2024-06-30 01:32:19] total 835716
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc 592180321 Jun 30 00:20 ATLAS.root_0
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc     17537 Jun 30 00:20 start_atlas.sh
[2024-06-30 01:32:19] -rw-r--r-- 2 boinc boinc    482475 Jun 30 00:20 input.tar.gz
[2024-06-30 01:32:19] -rw------- 1 boinc boinc 262296899 Jun 30 01:31 HITS.pool.root.1
[2024-06-30 01:32:19] -rw------- 1 boinc boinc    778240 Jun 30 01:32 result.tar.gz
01:32:20 (95249): run_atlas exited; CPU time 39237.079841
01:32:20 (95249): called boinc_finish(0)

</stderr_txt>
]]>

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