Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:27:53 (91294): wrapper (7.7.26015): starting
09:27:53 (91294): wrapper: running run_atlas (--nthreads 8)
[2024-06-29 09:27:53] Arguments: --nthreads 8
[2024-06-29 09:27:53] Threads: 8
[2024-06-29 09:27:53] Checking for CVMFS
[2024-06-29 09:27:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-29 09:27:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-29 09:27:54] Running cvmfs_config stat atlas.cern.ch
[2024-06-29 09:27:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-29 09:27:54] 2.11.2.0 66359 4535 169728 134429 1 83 12760630 18432000 11346 130560 0 16469775 98.734 44964384 48686 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-29 09:27:54] CVMFS is ok
[2024-06-29 09:27:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-29 09:27:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-29 09:27:54] Further information can be found at the LHC@home message board.
[2024-06-29 09:27:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-29 09:27:54] Checking for apptainer binary...
[2024-06-29 09:27:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-29 09:27:54] Running /usr/bin/apptainer --version
[2024-06-29 09:27:54] apptainer version 1.3.1-1.el7
[2024-06-29 09:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-29 09:27:56] c-212-19.aglt2.org
[2024-06-29 09:27:56] apptainer works
[2024-06-29 09:27:56] Set ATHENA_PROC_NUMBER=8
[2024-06-29 09:27:56] Set ATHENA_CORE_NUMBER=8
[2024-06-29 09:27:57] Starting ATLAS job with PandaID=6248607594
[2024-06-29 09:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-29 09:47:51]  *** The last 200 lines of the pilot log: ***
[2024-06-29 09:47:51]  direct_access_wan=False
[2024-06-29 09:47:51]  domain=
[2024-06-29 09:47:51]  filesize=146390
[2024-06-29 09:47:51]  filetype=log
[2024-06-29 09:47:51]  guid=9cb41979-4118-4e54-bfd4-b419f21a270d
[2024-06-29 09:47:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-29 09:47:51]  is_tar=False
[2024-06-29 09:47:51]  lfn=67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz
[2024-06-29 09:47:51]  mtime=0
[2024-06-29 09:47:51]  protocol_id=None
[2024-06-29 09:47:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-29 09:47:51]  replicas=None
[2024-06-29 09:47:51]  scope=hc_test
[2024-06-29 09:47:51]  status=None
[2024-06-29 09:47:51]  status_code=0
[2024-06-29 09:47:51]  storage_token=
[2024-06-29 09:47:51]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6248607594/67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz
[2024-06-29 09:47:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f7/bd/67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz
[2024-06-29 09:47:51]  workdir=None
[2024-06-29 09:47:51] ]
[2024-06-29 09:47:51] 2024-06-29 13:47:34,120 | INFO     | transferring file 67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz from /tmp/boinchome/slots/0/PanDA_Pilot-6248607594/67b5102d-3d0f-4342-a6ae-1950362585b7_
[2024-06-29 09:47:51] 2024-06-29 13:47:34,120 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6248607594/67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz /tmp/boinchome/slots/0/67
[2024-06-29 09:47:51] 2024-06-29 13:47:34,143 | INFO     | adding to output.list: 67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f7/bd/67b5102d-3d0f-
[2024-06-29 09:47:51] 2024-06-29 13:47:34,143 | INFO     | summary of transferred files:
[2024-06-29 09:47:51] 2024-06-29 13:47:34,143 | INFO     |  -- lfn=67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz, status_code=0, status=transferred
[2024-06-29 09:47:51] 2024-06-29 13:47:34,144 | INFO     | stage-out finished correctly
[2024-06-29 09:47:51] 2024-06-29 13:47:34,878 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-29 09:47:51] 2024-06-29 13:47:34,916 | INFO     | job 6248607594 has state=finished
[2024-06-29 09:47:51] 2024-06-29 13:47:34,916 | INFO     | preparing for final server update for job 6248607594 in state='finished'
[2024-06-29 09:47:51] 2024-06-29 13:47:34,916 | INFO     | this job has now completed (state=finished)
[2024-06-29 09:47:51] 2024-06-29 13:47:34,917 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-29 09:47:51] 2024-06-29 13:47:34,917 | INFO     | job 6248607594 has finished - writing final server update
[2024-06-29 09:47:51] 2024-06-29 13:47:34,917 | INFO     | total number of processed events: 8 (read)
[2024-06-29 09:47:51] 2024-06-29 13:47:34,919 | INFO     | executing command: lscpu
[2024-06-29 09:47:51] 2024-06-29 13:47:34,955 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-29 09:47:51] 2024-06-29 13:47:34,955 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-29 09:47:51] 2024-06-29 13:47:34,997 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-29 09:47:51] 2024-06-29 13:47:37,655 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-29 09:47:51] 2024-06-29 13:47:37,655 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6248607594/memory_monitor_summary.json (trf name=prmon)
[2024-06-29 09:47:51] 2024-06-29 13:47:37,656 | INFO     | extracted standard info from prmon json
[2024-06-29 09:47:51] 2024-06-29 13:47:37,656 | INFO     | extracted standard memory fields from prmon json
[2024-06-29 09:47:51] 2024-06-29 13:47:37,656 | WARNING  | GPU info not found in prmon json
[2024-06-29 09:47:51] 2024-06-29 13:47:37,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-29 09:47:51] 2024-06-29 13:47:37,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | fitting pss+swap vs Time
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | model: linear, x: [1719668017.0, 1719668078.0, 1719668139.0, 1719668200.0, 1719668261.0, 1719668322.0, 1719668383.0, 1719668444.0, 1719668505.0, 1719668566.0, 1719
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | sum of square deviations: 532103.0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | sum of deviations: 1056568800.0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | mean x: 1719668352.5
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | mean y: 1789570.8333333333
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | -- intersect: -3414652755881.6484
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | intersect: -3414652755881.6484
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | chi2: 0.2531799781672537
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | -- intersect: -3414652755881.6484
[2024-06-29 09:47:51] 2024-06-29 13:47:37,657 | INFO     | current memory leak: 1985.65 B/s (using 12 data points, chi2=0.25)
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | ..............................
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . Timing measurements:
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . get job = 0 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . initial setup = 1 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . payload setup = 6 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . stage-in = 0 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . payload execution = 1141 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . stage-out = 0 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | . log creation = 0 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,658 | INFO     | ..............................
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | 
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | job summary report
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | --------------------------------------------------
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | PanDA job id: 6248607594
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | task id: NULL
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | errors: (none)
[2024-06-29 09:47:51] 2024-06-29 13:47:37,700 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | pilot state: finished 
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | transexitcode: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | exeerrorcode: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | exeerrordiag: 
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | exitcode: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | exitmsg: OK
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | cpuconsumptiontime: 394 s
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | nevents: 8
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | neventsw: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | pid: 6248
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | pgrp: 6248
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | corecount: 8
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | event service: False
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | sizes: {0: 2386596, 3: 2386802, 11: 2386830, 1151: 2411189, 1153: 2420239, 1154: 2420295, 1156: 2420593}
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | --------------------------------------------------
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | 
[2024-06-29 09:47:51] 2024-06-29 13:47:37,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-29 09:47:51] 2024-06-29 13:47:37,717 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,718 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-29 09:47:51] 2024-06-29 13:47:37,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,719 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-29 09:47:51] 2024-06-29 13:47:37,719 | INFO     | job 6248607594 has completed (purged errors)
[2024-06-29 09:47:51] 2024-06-29 13:47:37,719 | INFO     | overall cleanup function is called
[2024-06-29 09:47:51] 2024-06-29 13:47:38,446 | WARNING  | process 6248 is no longer using CPU - aborting
[2024-06-29 09:47:51] 2024-06-29 13:47:38,446 | INFO     | aborting job monitoring since job object (job id=6248607594) has expired
[2024-06-29 09:47:51] 2024-06-29 13:47:38,724 | INFO     | --- collectZombieJob: --- 10, [6248]
[2024-06-29 09:47:51] 2024-06-29 13:47:38,724 | INFO     | zombie collector waiting for pid 6248
[2024-06-29 09:47:51] 2024-06-29 13:47:38,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-29 09:47:51] 2024-06-29 13:47:39,729 | INFO     | collected zombie processes
[2024-06-29 09:47:51] 2024-06-29 13:47:39,729 | INFO     | will now attempt to kill all subprocesses of pid=6248
[2024-06-29 09:47:51] 2024-06-29 13:47:39,839 | INFO     | process IDs to be killed: [6248] (in reverse order)
[2024-06-29 09:47:51] 2024-06-29 13:47:39,921 | WARNING  | found no corresponding commands to process id(s)
[2024-06-29 09:47:51] 2024-06-29 13:47:39,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-29 09:47:51] 2024-06-29 13:47:39,930 | INFO     | did not find any defunct processes belonging to 6248
[2024-06-29 09:47:51] 2024-06-29 13:47:39,937 | INFO     | did not find any defunct processes belonging to 6248
[2024-06-29 09:47:51] 2024-06-29 13:47:39,937 | INFO     | ready for new job
[2024-06-29 09:47:51] 2024-06-29 13:47:39,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-29 09:47:51] 2024-06-29 13:47:39,938 | INFO     | *************************************
[2024-06-29 09:47:51] 2024-06-29 13:47:39,939 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-29 09:47:51] 2024-06-29 13:47:39,939 | INFO     | *************************************
[2024-06-29 09:47:51] 2024-06-29 13:47:39,939 | INFO     | 
[2024-06-29 09:47:51] 2024-06-29 13:47:39,942 | INFO     | architecture information:
[2024-06-29 09:47:51] 2024-06-29 13:47:39,943 | INFO     | executing command: cat /etc/os-release
[2024-06-29 09:47:51] 2024-06-29 13:47:39,957 | INFO     | cat /etc/os-release:
[2024-06-29 09:47:51] NAME="CentOS Linux"
[2024-06-29 09:47:51] VERSION="7 (Core)"
[2024-06-29 09:47:51] ID="centos"
[2024-06-29 09:47:51] ID_LIKE="rhel fedora"
[2024-06-29 09:47:51] VERSION_ID="7"
[2024-06-29 09:47:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-29 09:47:51] ANSI_COLOR="0;31"
[2024-06-29 09:47:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-29 09:47:51] HOME_URL="https://www.centos.org/"
[2024-06-29 09:47:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-29 09:47:51] 
[2024-06-29 09:47:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-29 09:47:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-29 09:47:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-29 09:47:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-29 09:47:51] 
[2024-06-29 09:47:51] 2024-06-29 13:47:39,958 | INFO     | *************************************
[2024-06-29 09:47:51] 2024-06-29 13:47:40,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-29 09:47:51] 2024-06-29 13:47:40,478 | INFO     | sufficient remaining disk space (107174952960 B)
[2024-06-29 09:47:51] 2024-06-29 13:47:40,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-29 09:47:51] 2024-06-29 13:47:40,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-29 09:47:51] 2024-06-29 13:47:40,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-29 09:47:51] 2024-06-29 13:47:40,478 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-29 09:47:51] 2024-06-29 13:47:40,479 | INFO     | found 0 job(s) in 20 queues
[2024-06-29 09:47:51] 2024-06-29 13:47:40,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-29 09:47:51] 2024-06-29 13:47:40,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-29 09:47:51] 2024-06-29 13:47:40,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-29 09:47:51] 2024-06-29 13:47:40,948 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-29 09:47:51] 2024-06-29 13:47:40,948 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-29 09:47:51] 2024-06-29 13:47:40,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-29 09:47:51] 2024-06-29 13:47:40,949 | INFO     | will abort loop
[2024-06-29 09:47:51] 2024-06-29 13:47:40,993 | INFO     | all data control threads have been joined
[2024-06-29 09:47:51] 2024-06-29 13:47:41,420 | INFO     | all payload control threads have been joined
[2024-06-29 09:47:51] 2024-06-29 13:47:41,479 | INFO     | [job] retrieve thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:41,563 | INFO     | [data] copytool_in thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:41,633 | INFO     | all job control threads have been joined
[2024-06-29 09:47:51] 2024-06-29 13:47:41,949 | INFO     | [job] job monitor thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:41,998 | INFO     | [data] control thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,254 | INFO     | [payload] execute_payloads thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,421 | INFO     | [payload] control thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,447 | INFO     | [payload] failed_post thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,484 | INFO     | [data] copytool_out thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,603 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,638 | INFO     | [job] control thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-29 09:47:51] 2024-06-29 13:47:42,812 | INFO     | [job] validate thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,901 | INFO     | [job] create_data_payload thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,914 | INFO     | [payload] validate_post thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:42,947 | INFO     | [payload] validate_pre thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:43,714 | INFO     | [job] queue monitor thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:44,926 | INFO     | [data] queue_monitor thread has finished
[2024-06-29 09:47:51] 2024-06-29 13:47:46,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555845556032)>', '<ExcThread(monitor, started 140555396826880)>']
[2024-06-29 09:47:51] 2024-06-29 13:47:46,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-29 09:47:51] 2024-06-29 13:47:46,494 | INFO     | [monitor] control thread has ended
[2024-06-29 09:47:51] 2024-06-29 13:47:51,350 | INFO     | all workflow threads have been joined
[2024-06-29 09:47:51] 2024-06-29 13:47:51,350 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-29 09:47:51] 2024-06-29 13:47:51,351 | INFO     | traces error code: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:51,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-29 09:47:51] 2024-06-29 13:47:51,472 [wrapper] ==== pilot stdout END ====
[2024-06-29 09:47:51] 2024-06-29 13:47:51,474 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-29 09:47:51] 2024-06-29 13:47:51,475 [wrapper] pilotpid: 95975
[2024-06-29 09:47:51] 2024-06-29 13:47:51,477 [wrapper] Pilot exit status: 0
[2024-06-29 09:47:51] 2024-06-29 13:47:51,485 [wrapper] pandaids: 6248607594
[2024-06-29 09:47:51] 2024-06-29 13:47:51,548 [wrapper] cleanup supervisor_pilot 16016 95976
[2024-06-29 09:47:51] 2024-06-29 13:47:51,550 [wrapper] Test setup, not cleaning
[2024-06-29 09:47:51] 2024-06-29 13:47:51,552 [wrapper] ==== wrapper stdout END ====
[2024-06-29 09:47:51] 2024-06-29 13:47:51,553 [wrapper] ==== wrapper stderr END ====
[2024-06-29 09:47:51] 2024-06-29 13:47:51,557 [wrapper] apfmon messages muted
[2024-06-29 09:47:51]  *** Error codes and diagnostics ***
[2024-06-29 09:47:51]     "exeErrorCode": 0,
[2024-06-29 09:47:51]     "exeErrorDiag": "",
[2024-06-29 09:47:51]     "pilotErrorCode": 0,
[2024-06-29 09:47:51]     "pilotErrorDiag": "",
[2024-06-29 09:47:51]  *** Listing of results directory ***
[2024-06-29 09:47:51] total 141904
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas    469766 Jun 29 08:36 pilot3.tar.gz
[2024-06-29 09:47:51] -rwx------ 1 boincer umatlas     32220 Jun 29 09:27 runpilot2-wrapper.sh
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas      4409 Jun 29 09:27 queuedata.json
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas       100 Jun 29 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-29 09:47:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun 29 09:27 run_atlas
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas       105 Jun 29 09:27 job.xml
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas 138344849 Jun 29 09:27 EVNT.29070483._000435.pool.root.1
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas     17656 Jun 29 09:27 start_atlas.sh
[2024-06-29 09:47:51] drwxrwx--x 2 boincer umatlas      4096 Jun 29 09:27 shared
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas    482418 Jun 29 09:27 input.tar.gz
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas         0 Jun 29 09:27 boinc_lockfile
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas      2682 Jun 29 09:27 pandaJob.out
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas       424 Jun 29 09:27 setup.sh.local
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1036632 Jun 29 09:28 agis_schedconf.cvmfs.json
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas         0 Jun 29 09:28 agis_ddmendpoints.agis.ALL.json
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1321378 Jun 29 09:28 cric_ddmendpoints.json
[2024-06-29 09:47:51] drwx------ 4 boincer umatlas      4096 Jun 29 09:28 pilot3
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas        95 Jun 29 09:47 pilot_heartbeat.json
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas      6300 Jun 29 09:47 init_data.xml
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1407049 Jun 29 09:47 output.1.67b5102d-3d0f-4342-a6ae-1950362585b7_43881.pool.root
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas      1034 Jun 29 09:47 memory_monitor_summary.json
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas    146390 Jun 29 09:47 67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log.tgz
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas       527 Jun 29 09:47 boinc_task_state.xml
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas      7892 Jun 29 09:47 heartbeat.json
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas        25 Jun 29 09:47 wrapper_checkpoint.txt
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas      8192 Jun 29 09:47 boinc_mmap_file
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas      4521 Jun 29 09:47 pilotlog.txt
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas    155718 Jun 29 09:47 67b5102d-3d0f-4342-a6ae-1950362585b7_43881.1.job.log
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas       464 Jun 29 09:47 output.list
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas       748 Jun 29 09:47 runtime_log
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1730560 Jun 29 09:47 result.tar.gz
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas       651 Jun 29 09:47 ViAMDmyHnh5n7Olcko1bjSoqABFKDmABFKDmOtvXDmwCsKDmsIytQo.diag
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas     12012 Jun 29 09:47 runtime_log.err
[2024-06-29 09:47:51] -rw-r--r-- 1 boincer umatlas     21158 Jun 29 09:47 stderr.txt
[2024-06-29 09:47:51] HITS file was successfully produced:
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas 1407049 Jun 29 09:47 shared/HITS.pool.root.1
[2024-06-29 09:47:51]  *** Contents of shared directory: ***
[2024-06-29 09:47:51] total 138664
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas 138344849 Jun 29 09:27 ATLAS.root_0
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas     17656 Jun 29 09:27 start_atlas.sh
[2024-06-29 09:47:51] -rw-r--r-- 2 boincer umatlas    482418 Jun 29 09:27 input.tar.gz
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1407049 Jun 29 09:47 HITS.pool.root.1
[2024-06-29 09:47:51] -rw------- 1 boincer umatlas   1730560 Jun 29 09:47 result.tar.gz
09:47:53 (91294): run_atlas exited; CPU time 380.989681
09:47:53 (91294): called boinc_finish(0)

</stderr_txt>
]]>

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