Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:50:13 (29447): wrapper (7.7.26015): starting
16:50:13 (29447): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 16:50:13] Arguments: --nthreads 8
[2024-06-27 16:50:13] Threads: 8
[2024-06-27 16:50:13] Checking for CVMFS
[2024-06-27 16:50:13] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 16:50:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 16:50:13] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 16:50:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 16:50:14] 2.11.2.0 16934 8842 218028 134358 2 235 13702667 18432000 20913 130560 0 83437262 99.565 66250615 41940 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 16:50:14] CVMFS is ok
[2024-06-27 16:50:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 16:50:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 16:50:14] Further information can be found at the LHC@home message board.
[2024-06-27 16:50:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 16:50:14] Checking for apptainer binary...
[2024-06-27 16:50:14] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 16:50:14] Running /usr/bin/apptainer --version
[2024-06-27 16:50:14] apptainer version 1.3.2-1.el7
[2024-06-27 16:50:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 16:50:18] c-211-40.aglt2.org
[2024-06-27 16:50:18] apptainer works
[2024-06-27 16:50:18] Set ATHENA_PROC_NUMBER=8
[2024-06-27 16:50:18] Set ATHENA_CORE_NUMBER=8
[2024-06-27 16:50:18] Starting ATLAS job with PandaID=6246611071
[2024-06-27 16:50:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 23:47:43]  *** The last 200 lines of the pilot log: ***
[2024-06-27 23:47:43] 2024-06-28 03:47:19,435 | INFO     | preparing for final server update for job 6246611071 in state='finished'
[2024-06-27 23:47:43] 2024-06-28 03:47:19,436 | INFO     | this job has now completed (state=finished)
[2024-06-27 23:47:43] 2024-06-28 03:47:19,436 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 23:47:43] 2024-06-28 03:47:19,436 | INFO     | job 6246611071 has finished - writing final server update
[2024-06-27 23:47:43] 2024-06-28 03:47:19,436 | INFO     | total number of processed events: 400 (read)
[2024-06-27 23:47:43] 2024-06-28 03:47:19,440 | INFO     | executing command: lscpu
[2024-06-27 23:47:43] 2024-06-28 03:47:19,472 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-27 23:47:43] 2024-06-28 03:47:19,472 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 23:47:43] 2024-06-28 03:47:19,517 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 23:47:43] 2024-06-28 03:47:19,833 | INFO     | monitor loop #1743: job 0:6246611071 is in state 'finished'
[2024-06-27 23:47:43] 2024-06-28 03:47:19,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 23:47:43] 2024-06-28 03:47:22,336 | INFO     | monitor loop #1744: job 0:6246611071 is in state 'finished'
[2024-06-27 23:47:43] 2024-06-28 03:47:22,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,186 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 23:47:43] 2024-06-28 03:47:23,187 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6246611071/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,188 | INFO     | extracted standard info from prmon json
[2024-06-27 23:47:43] 2024-06-28 03:47:23,188 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 23:47:43] 2024-06-28 03:47:23,188 | WARNING  | GPU info not found in prmon json
[2024-06-27 23:47:43] 2024-06-28 03:47:23,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 23:47:43] 2024-06-28 03:47:23,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 23:47:43] 2024-06-28 03:47:23,195 | INFO     | fitting pss+swap vs Time
[2024-06-27 23:47:43] 2024-06-28 03:47:23,196 | INFO     | model: linear, x: [1719521587.0, 1719521648.0, 1719521709.0, 1719521770.0, 1719521831.0, 1719521892.0, 1719521953.0, 1719522014.0, 1719522075.0, 1719522136.0, 1719
[2024-06-27 23:47:43] 2024-06-28 03:47:23,196 | INFO     | sum of square deviations: 21059938423.64705
[2024-06-27 23:47:43] 2024-06-28 03:47:23,200 | INFO     | sum of deviations: 703849468232.9998
[2024-06-27 23:47:43] 2024-06-28 03:47:23,200 | INFO     | mean x: 1719534000.5294118
[2024-06-27 23:47:43] 2024-06-28 03:47:23,200 | INFO     | mean y: 2347075.0416666665
[2024-06-27 23:47:43] 2024-06-28 03:47:23,200 | INFO     | -- intersect: -57466628737.45252
[2024-06-27 23:47:43] 2024-06-28 03:47:23,200 | INFO     | intersect: -57466628737.45252
[2024-06-27 23:47:43] 2024-06-28 03:47:23,201 | INFO     | chi2: 16.04381577783553
[2024-06-27 23:47:43] 2024-06-28 03:47:23,201 | INFO     | model: linear, x: [1719521587.0, 1719521648.0, 1719521709.0, 1719521770.0, 1719521831.0, 1719521892.0, 1719521953.0, 1719522014.0, 1719522075.0, 1719522136.0, 1719
[2024-06-27 23:47:43] 2024-06-28 03:47:23,201 | INFO     | sum of square deviations: 20295127743.642754
[2024-06-27 23:47:43] 2024-06-28 03:47:23,205 | INFO     | sum of deviations: 721248449716.3676
[2024-06-27 23:47:43] 2024-06-28 03:47:23,205 | INFO     | mean x: 1719533848.0297766
[2024-06-27 23:47:43] 2024-06-28 03:47:23,205 | INFO     | mean y: 2350490.3027295284
[2024-06-27 23:47:43] 2024-06-28 03:47:23,205 | INFO     | -- intersect: -61106460343.114174
[2024-06-27 23:47:43] 2024-06-28 03:47:23,205 | INFO     | intersect: -61106460343.114174
[2024-06-27 23:47:43] 2024-06-28 03:47:23,206 | INFO     | chi2: 15.258303903548619
[2024-06-27 23:47:43] 2024-06-28 03:47:23,206 | INFO     | current chi2=15.258303903548619 (change=4.8960414727031 %)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,206 | INFO     | right removable region: 402
[2024-06-27 23:47:43] 2024-06-28 03:47:23,206 | INFO     | model: linear, x: [1719521892.0, 1719521953.0, 1719522014.0, 1719522075.0, 1719522136.0, 1719522197.0, 1719522258.0, 1719522319.0, 1719522380.0, 1719522441.0, 1719
[2024-06-27 23:47:43] 2024-06-28 03:47:23,206 | INFO     | sum of square deviations: 20295120423.642754
[2024-06-27 23:47:43] 2024-06-28 03:47:23,210 | INFO     | sum of deviations: 588385735355.4436
[2024-06-27 23:47:43] 2024-06-28 03:47:23,210 | INFO     | mean x: 1719534153.0297766
[2024-06-27 23:47:43] 2024-06-28 03:47:23,210 | INFO     | mean y: 2370074.3796526054
[2024-06-27 23:47:43] 2024-06-28 03:47:23,210 | INFO     | -- intersect: -49849483276.566216
[2024-06-27 23:47:43] 2024-06-28 03:47:23,210 | INFO     | intersect: -49849483276.566216
[2024-06-27 23:47:43] 2024-06-28 03:47:23,211 | INFO     | chi2: 12.563067430284194
[2024-06-27 23:47:43] 2024-06-28 03:47:23,211 | INFO     | current chi2=12.563067430284194 (change=21.695264990264825 %)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,211 | INFO     | left removable region: 10
[2024-06-27 23:47:43] 2024-06-28 03:47:23,211 | INFO     | model: linear, x: [1719522197.0, 1719522258.0, 1719522319.0, 1719522380.0, 1719522441.0, 1719522502.0, 1719522563.0, 1719522624.0, 1719522685.0, 1719522746.0, 1719
[2024-06-27 23:47:43] 2024-06-28 03:47:23,211 | INFO     | sum of square deviations: 18678182931.632618
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | sum of deviations: 525140209626.5714
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | mean x: 1719534122.5306122
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | mean y: 2390337.535714286
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | -- intersect: -48342596584.96036
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | intersect: -48342596584.96036
[2024-06-27 23:47:43] 2024-06-28 03:47:23,215 | INFO     | chi2: 10.298726990756004
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | -- intersect: -48342596584.96036
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | current memory leak: 28.12 B/s (using 392 data points, chi2=10.30)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | ..............................
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | . Timing measurements:
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | . get job = 0 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | . initial setup = 3 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,216 | INFO     | . payload setup = 31 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,217 | INFO     | . stage-in = 0 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,217 | INFO     | . payload execution = 24887 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,217 | INFO     | . stage-out = 1 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,217 | INFO     | . log creation = 0 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,217 | INFO     | ..............................
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | 
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | job summary report
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | --------------------------------------------------
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | PanDA job id: 6246611071
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | task id: 40102863
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | errors: (none)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,287 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | pilot state: finished 
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | transexitcode: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | exeerrorcode: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | exeerrordiag: 
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | exitcode: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | exitmsg: OK
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | cpuconsumptiontime: 99400 s
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | nevents: 400
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | neventsw: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | pid: 27004
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | pgrp: 27004
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | corecount: 8
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | event service: False
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | sizes: {0: 2386849, 1: 2387048, 12: 2387048, 21: 2387282, 23: 2387310, 24921: 2423011, 24922: 2431971, 24925: 2432027, 24932: 2432197}
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | --------------------------------------------------
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | 
[2024-06-27 23:47:43] 2024-06-28 03:47:23,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,311 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | job 6246611071 has completed (purged errors)
[2024-06-27 23:47:43] 2024-06-28 03:47:23,312 | INFO     | overall cleanup function is called
[2024-06-27 23:47:43] 2024-06-28 03:47:24,320 | INFO     | --- collectZombieJob: --- 10, [27004]
[2024-06-27 23:47:43] 2024-06-28 03:47:24,320 | INFO     | zombie collector waiting for pid 27004
[2024-06-27 23:47:43] 2024-06-28 03:47:24,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 23:47:43] 2024-06-28 03:47:25,325 | INFO     | collected zombie processes
[2024-06-27 23:47:43] 2024-06-28 03:47:25,325 | INFO     | will now attempt to kill all subprocesses of pid=27004
[2024-06-27 23:47:43] 2024-06-28 03:47:25,482 | INFO     | process IDs to be killed: [27004] (in reverse order)
[2024-06-27 23:47:43] 2024-06-28 03:47:25,576 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 23:47:43] 2024-06-28 03:47:25,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 23:47:43] 2024-06-28 03:47:25,586 | INFO     | did not find any defunct processes belonging to 27004
[2024-06-27 23:47:43] 2024-06-28 03:47:25,595 | INFO     | did not find any defunct processes belonging to 27004
[2024-06-27 23:47:43] 2024-06-28 03:47:25,596 | INFO     | ready for new job
[2024-06-27 23:47:43] 2024-06-28 03:47:25,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 23:47:43] 2024-06-28 03:47:25,598 | INFO     | *************************************
[2024-06-27 23:47:43] 2024-06-28 03:47:25,598 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 23:47:43] 2024-06-28 03:47:25,598 | INFO     | *************************************
[2024-06-27 23:47:43] 2024-06-28 03:47:25,598 | INFO     | 
[2024-06-27 23:47:43] 2024-06-28 03:47:25,601 | INFO     | architecture information:
[2024-06-27 23:47:43] 2024-06-28 03:47:25,601 | INFO     | executing command: cat /etc/os-release
[2024-06-27 23:47:43] 2024-06-28 03:47:25,617 | INFO     | cat /etc/os-release:
[2024-06-27 23:47:43] NAME="CentOS Linux"
[2024-06-27 23:47:43] VERSION="7 (Core)"
[2024-06-27 23:47:43] ID="centos"
[2024-06-27 23:47:43] ID_LIKE="rhel fedora"
[2024-06-27 23:47:43] VERSION_ID="7"
[2024-06-27 23:47:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 23:47:43] ANSI_COLOR="0;31"
[2024-06-27 23:47:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 23:47:43] HOME_URL="https://www.centos.org/"
[2024-06-27 23:47:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 23:47:43] 
[2024-06-27 23:47:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 23:47:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 23:47:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 23:47:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 23:47:43] 
[2024-06-27 23:47:43] 2024-06-28 03:47:25,618 | INFO     | *************************************
[2024-06-27 23:47:43] 2024-06-28 03:47:26,121 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-27 23:47:43] 2024-06-28 03:47:26,139 | INFO     | sufficient remaining disk space (76984352768 B)
[2024-06-27 23:47:43] 2024-06-28 03:47:26,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 23:47:43] 2024-06-28 03:47:26,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 23:47:43] 2024-06-28 03:47:26,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 23:47:43] 2024-06-28 03:47:26,140 | INFO     | aborting loop
[2024-06-27 23:47:43] 2024-06-28 03:47:26,197 | INFO     | all job control threads have been joined
[2024-06-27 23:47:43] 2024-06-28 03:47:26,530 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 23:47:43] 2024-06-28 03:47:26,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 23:47:43] 2024-06-28 03:47:26,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 23:47:43] 2024-06-28 03:47:26,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 23:47:43] 2024-06-28 03:47:27,063 | INFO     | all data control threads have been joined
[2024-06-27 23:47:43] 2024-06-28 03:47:27,145 | INFO     | [job] retrieve thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,146 | INFO     | [job] job monitor thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 23:47:43] 2024-06-28 03:47:27,200 | INFO     | [job] control thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,235 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,262 | INFO     | [payload] failed_post thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,267 | INFO     | [data] copytool_in thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,351 | INFO     | [job] validate thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,439 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:27,644 | INFO     | all payload control threads have been joined
[2024-06-27 23:47:43] 2024-06-28 03:47:27,844 | INFO     | [payload] validate_post thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:28,063 | INFO     | [data] control thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:28,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 23:47:43] 2024-06-28 03:47:28,364 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:28,650 | INFO     | [payload] control thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:28,931 | INFO     | [data] copytool_out thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:29,296 | INFO     | [job] queue monitor thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:31,179 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:36,750 | INFO     | job.realtimelogging is not enabled
[2024-06-27 23:47:43] 2024-06-28 03:47:37,756 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 23:47:43] 2024-06-28 03:47:38,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517617125184)>', '<ExcThread(monitor, started 140517102843648)>']
[2024-06-27 23:47:43] 2024-06-28 03:47:38,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 23:47:43] 2024-06-28 03:47:38,592 | INFO     | [monitor] control thread has ended
[2024-06-27 23:47:43] 2024-06-28 03:47:43,039 | INFO     | all workflow threads have been joined
[2024-06-27 23:47:43] 2024-06-28 03:47:43,039 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 23:47:43] 2024-06-28 03:47:43,039 | INFO     | traces error code: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:43,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 23:47:43] 2024-06-28 03:47:43,154 [wrapper] ==== pilot stdout END ====
[2024-06-27 23:47:43] 2024-06-28 03:47:43,157 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 23:47:43] 2024-06-28 03:47:43,159 [wrapper] pilotpid: 53053
[2024-06-27 23:47:43] 2024-06-28 03:47:43,160 [wrapper] Pilot exit status: 0
[2024-06-27 23:47:43] 2024-06-28 03:47:43,218 [wrapper] pandaids: 6246611071
[2024-06-27 23:47:43] 2024-06-28 03:47:43,286 [wrapper] cleanup supervisor_pilot 53445 53054
[2024-06-27 23:47:43] 2024-06-28 03:47:43,288 [wrapper] Test setup, not cleaning
[2024-06-27 23:47:43] 2024-06-28 03:47:43,291 [wrapper] ==== wrapper stdout END ====
[2024-06-27 23:47:43] 2024-06-28 03:47:43,294 [wrapper] ==== wrapper stderr END ====
[2024-06-27 23:47:43] 2024-06-28 03:47:43,299 [wrapper] apfmon messages muted
[2024-06-27 23:47:43]  *** Error codes and diagnostics ***
[2024-06-27 23:47:43]     "exeErrorCode": 0,
[2024-06-27 23:47:43]     "exeErrorDiag": "",
[2024-06-27 23:47:43]     "pilotErrorCode": 0,
[2024-06-27 23:47:43]     "pilotErrorDiag": "",
[2024-06-27 23:47:43]  *** Listing of results directory ***
[2024-06-27 23:47:43] total 588876
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 16:34 pilot3.tar.gz
[2024-06-27 23:47:43] -rwx------ 1 boincer umatlas     32220 Jun 27 16:49 runpilot2-wrapper.sh
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 16:49 queuedata.json
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas       100 Jun 27 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 23:47:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 16:50 run_atlas
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas       105 Jun 27 16:50 job.xml
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas 393262968 Jun 27 16:50 EVNT.34668848._000002.pool.root.1
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 16:50 start_atlas.sh
[2024-06-27 23:47:43] drwxrwx--x 2 boincer umatlas      4096 Jun 27 16:50 shared
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas    482503 Jun 27 16:50 input.tar.gz
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas         0 Jun 27 16:50 boinc_lockfile
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas      2593 Jun 27 16:50 pandaJob.out
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas       467 Jun 27 16:50 setup.sh.local
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas   1036876 Jun 27 16:51 agis_schedconf.cvmfs.json
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas   1321378 Jun 27 16:51 cric_ddmendpoints.json
[2024-06-27 23:47:43] drwx------ 4 boincer umatlas      4096 Jun 27 16:51 pilot3
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas      6339 Jun 27 23:38 init_data.xml
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas 200646105 Jun 27 23:46 HITS.40102863._000064.pool.root.1
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas       531 Jun 27 23:46 boinc_task_state.xml
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas        95 Jun 27 23:46 pilot_heartbeat.json
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas      1080 Jun 27 23:47 memory_monitor_summary.json
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas         0 Jun 27 23:47 agis_ddmendpoints.agis.ALL.json
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas    508018 Jun 27 23:47 log.40102863._000064.job.log.tgz.1
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas      7741 Jun 27 23:47 heartbeat.json
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas        28 Jun 27 23:47 wrapper_checkpoint.txt
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 23:47 boinc_mmap_file
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas      4283 Jun 27 23:47 pilotlog.txt
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas   2266174 Jun 27 23:47 log.40102863._000064.job.log.1
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas       357 Jun 27 23:47 output.list
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas       620 Jun 27 23:47 runtime_log
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas   2795520 Jun 27 23:47 result.tar.gz
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 23:47 runtime_log.err
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas       653 Jun 27 23:47 6bXMDmqEBh5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm3BpKDmIbaHpm.diag
[2024-06-27 23:47:43] -rw-r--r-- 1 boincer umatlas     21818 Jun 27 23:47 stderr.txt
[2024-06-27 23:47:43] HITS file was successfully produced:
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas 200646105 Jun 27 23:46 shared/HITS.pool.root.1
[2024-06-27 23:47:43]  *** Contents of shared directory: ***
[2024-06-27 23:47:43] total 583220
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas 393262968 Jun 27 16:50 ATLAS.root_0
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 16:50 start_atlas.sh
[2024-06-27 23:47:43] -rw-r--r-- 2 boincer umatlas    482503 Jun 27 16:50 input.tar.gz
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas 200646105 Jun 27 23:46 HITS.pool.root.1
[2024-06-27 23:47:43] -rw------- 1 boincer umatlas   2795520 Jun 27 23:47 result.tar.gz
23:47:45 (29447): run_atlas exited; CPU time 97395.845599
23:47:45 (29447): called boinc_finish(0)

</stderr_txt>
]]>

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