Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:05:24 (21436): wrapper (7.7.26015): starting
09:05:24 (21436): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 09:05:24] Arguments: --nthreads 8
[2024-06-27 09:05:24] Threads: 8
[2024-06-27 09:05:24] Checking for CVMFS
[2024-06-27 09:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 09:05:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 09:05:24] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 09:05:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 09:05:25] 2.10.1.0 17742 242736 186352 134353 0 206 35827964 45568001 4213 130560 0 1276034472 99.723 963493687 3993 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-27 09:05:25] CVMFS is ok
[2024-06-27 09:05:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 09:05:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 09:05:25] Further information can be found at the LHC@home message board.
[2024-06-27 09:05:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 09:05:25] Checking for apptainer binary...
[2024-06-27 09:05:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 09:05:25] Running /usr/bin/apptainer --version
[2024-06-27 09:05:25] apptainer version 1.3.2-1.el7
[2024-06-27 09:05:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 09:05:26] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0018.triumf.lcg
[2024-06-27 09:05:26] apptainer works
[2024-06-27 09:05:26] Set ATHENA_PROC_NUMBER=8
[2024-06-27 09:05:26] Set ATHENA_CORE_NUMBER=8
[2024-06-27 09:05:26] Starting ATLAS job with PandaID=6246327598
[2024-06-27 09:05:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 10:34:24]  *** The last 200 lines of the pilot log: ***
[2024-06-27 10:34:24]  filesize=299439
[2024-06-27 10:34:24]  filetype=log
[2024-06-27 10:34:24]  guid=3350859f-7f13-47f4-8672-aacfc702585b
[2024-06-27 10:34:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-27 10:34:24]  is_tar=False
[2024-06-27 10:34:24]  lfn=log.40102747._000059.job.log.tgz.1
[2024-06-27 10:34:24]  mtime=0
[2024-06-27 10:34:24]  protocol_id=None
[2024-06-27 10:34:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 10:34:24]  replicas=None
[2024-06-27 10:34:24]  scope=mc23_13p6TeV
[2024-06-27 10:34:24]  status=None
[2024-06-27 10:34:24]  status_code=0
[2024-06-27 10:34:24]  storage_token=
[2024-06-27 10:34:24]  surl=/home/boinc/slots/0/PanDA_Pilot-6246327598/log.40102747._000059.job.log.tgz.1
[2024-06-27 10:34:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/b9/log.40102747._000059.job.log.tgz.1
[2024-06-27 10:34:24]  workdir=None
[2024-06-27 10:34:24] ]
[2024-06-27 10:34:24] 2024-06-27 17:33:54,897 | INFO     | transferring file log.40102747._000059.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246327598/log.40102747._000059.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 10:34:24] 2024-06-27 17:33:54,898 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246327598/log.40102747._000059.job.log.tgz.1 /home/boinc/slots/0/log.40102747._000059.job.log.t
[2024-06-27 10:34:24] 2024-06-27 17:33:54,917 | INFO     | adding to output.list: log.40102747._000059.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/b9/log.40102747._000059.job.log.tg
[2024-06-27 10:34:24] 2024-06-27 17:33:54,918 | INFO     | summary of transferred files:
[2024-06-27 10:34:24] 2024-06-27 17:33:54,918 | INFO     |  -- lfn=log.40102747._000059.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 10:34:24] 2024-06-27 17:33:54,918 | INFO     | stage-out finished correctly
[2024-06-27 10:34:24] 2024-06-27 17:33:56,000 | WARNING  | process 32054 is no longer using CPU - aborting
[2024-06-27 10:34:24] 2024-06-27 17:33:57,771 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 10:34:24] 2024-06-27 17:33:58,227 | INFO     | job 6246327598 has state=finished
[2024-06-27 10:34:24] 2024-06-27 17:33:58,227 | INFO     | preparing for final server update for job 6246327598 in state='finished'
[2024-06-27 10:34:24] 2024-06-27 17:33:58,228 | INFO     | this job has now completed (state=finished)
[2024-06-27 10:34:24] 2024-06-27 17:33:58,228 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 10:34:24] 2024-06-27 17:33:58,228 | INFO     | job 6246327598 has finished - writing final server update
[2024-06-27 10:34:24] 2024-06-27 17:33:58,228 | INFO     | total number of processed events: 400 (read)
[2024-06-27 10:34:24] 2024-06-27 17:33:58,230 | INFO     | executing command: lscpu
[2024-06-27 10:34:24] 2024-06-27 17:33:58,270 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-27 10:34:24] 2024-06-27 17:33:58,271 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 10:34:24] 2024-06-27 17:33:58,309 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 10:34:24] 2024-06-27 17:33:58,503 | INFO     | monitor loop #414: job 0:6246327598 is in state 'finished'
[2024-06-27 10:34:24] 2024-06-27 17:33:58,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 10:34:24] 2024-06-27 17:33:59,230 | INFO     | 5306s have passed since pilot start
[2024-06-27 10:34:24] 2024-06-27 17:34:01,007 | INFO     | monitor loop #415: job 0:6246327598 is in state 'finished'
[2024-06-27 10:34:24] 2024-06-27 17:34:01,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,395 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 10:34:24] 2024-06-27 17:34:01,396 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246327598/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,397 | INFO     | extracted standard info from prmon json
[2024-06-27 10:34:24] 2024-06-27 17:34:01,397 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 10:34:24] 2024-06-27 17:34:01,397 | WARNING  | GPU info not found in prmon json
[2024-06-27 10:34:24] 2024-06-27 17:34:01,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 10:34:24] 2024-06-27 17:34:01,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 10:34:24] 2024-06-27 17:34:01,400 | INFO     | fitting pss+swap vs Time
[2024-06-27 10:34:24] 2024-06-27 17:34:01,401 | INFO     | model: linear, x: [1719504662.0, 1719504723.0, 1719504784.0, 1719504845.0, 1719504906.0, 1719504967.0, 1719505028.0, 1719505089.0, 1719505150.0, 1719505211.0, 1719
[2024-06-27 10:34:24] 2024-06-27 17:34:01,401 | INFO     | sum of square deviations: 158737860.0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,401 | INFO     | sum of deviations: 29204252609.500004
[2024-06-27 10:34:24] 2024-06-27 17:34:01,401 | INFO     | mean x: 1719507071.5
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | mean y: 2627888.2875
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | -- intersect: -316348612325.6576
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | intersect: -316348612325.6576
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | chi2: 1.914781152671555
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | -- intersect: -316348612325.6576
[2024-06-27 10:34:24] 2024-06-27 17:34:01,402 | INFO     | current memory leak: 183.98 B/s (using 80 data points, chi2=1.91)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | ..............................
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | . Timing measurements:
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | . get job = 0 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | . initial setup = 2 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | . payload setup = 5 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,403 | INFO     | . stage-in = 0 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,404 | INFO     | . payload execution = 5276 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,404 | INFO     | . stage-out = 0 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,404 | INFO     | . log creation = 0 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,404 | INFO     | ..............................
[2024-06-27 10:34:24] 2024-06-27 17:34:01,490 | INFO     | 
[2024-06-27 10:34:24] 2024-06-27 17:34:01,490 | INFO     | job summary report
[2024-06-27 10:34:24] 2024-06-27 17:34:01,490 | INFO     | --------------------------------------------------
[2024-06-27 10:34:24] 2024-06-27 17:34:01,490 | INFO     | PanDA job id: 6246327598
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | task id: 40102747
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | errors: (none)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | pilot state: finished 
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | transexitcode: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | exeerrorcode: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | exeerrordiag: 
[2024-06-27 10:34:24] 2024-06-27 17:34:01,491 | INFO     | exitcode: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | exitmsg: OK
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | cpuconsumptiontime: 33372 s
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | nevents: 400
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | neventsw: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | pid: 32054
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | pgrp: 32054
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | corecount: 8
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | event service: False
[2024-06-27 10:34:24] 2024-06-27 17:34:01,492 | INFO     | sizes: {0: 2386873, 1: 2387072, 4: 2387278, 11: 2387306, 5285: 2413638, 5287: 2422592, 5290: 2422776, 5293: 2422946}
[2024-06-27 10:34:24] 2024-06-27 17:34:01,493 | INFO     | --------------------------------------------------
[2024-06-27 10:34:24] 2024-06-27 17:34:01,493 | INFO     | 
[2024-06-27 10:34:24] 2024-06-27 17:34:01,493 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 10:34:24] 2024-06-27 17:34:01,513 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,516 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,516 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 10:34:24] 2024-06-27 17:34:01,516 | INFO     | job 6246327598 has completed (purged errors)
[2024-06-27 10:34:24] 2024-06-27 17:34:01,516 | INFO     | overall cleanup function is called
[2024-06-27 10:34:24] 2024-06-27 17:34:02,524 | INFO     | --- collectZombieJob: --- 10, [32054]
[2024-06-27 10:34:24] 2024-06-27 17:34:02,524 | INFO     | zombie collector waiting for pid 32054
[2024-06-27 10:34:24] 2024-06-27 17:34:02,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 10:34:24] 2024-06-27 17:34:03,530 | INFO     | collected zombie processes
[2024-06-27 10:34:24] 2024-06-27 17:34:03,530 | INFO     | will now attempt to kill all subprocesses of pid=32054
[2024-06-27 10:34:24] 2024-06-27 17:34:03,593 | INFO     | process IDs to be killed: [32054] (in reverse order)
[2024-06-27 10:34:24] 2024-06-27 17:34:03,657 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 10:34:24] 2024-06-27 17:34:03,657 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 10:34:24] 2024-06-27 17:34:03,662 | INFO     | did not find any defunct processes belonging to 32054
[2024-06-27 10:34:24] 2024-06-27 17:34:03,665 | INFO     | did not find any defunct processes belonging to 32054
[2024-06-27 10:34:24] 2024-06-27 17:34:03,666 | INFO     | ready for new job
[2024-06-27 10:34:24] 2024-06-27 17:34:03,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 10:34:24] 2024-06-27 17:34:03,667 | INFO     | *************************************
[2024-06-27 10:34:24] 2024-06-27 17:34:03,667 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 10:34:24] 2024-06-27 17:34:03,668 | INFO     | *************************************
[2024-06-27 10:34:24] 2024-06-27 17:34:03,668 | INFO     | 
[2024-06-27 10:34:24] 2024-06-27 17:34:03,670 | INFO     | architecture information:
[2024-06-27 10:34:24] 2024-06-27 17:34:03,670 | INFO     | executing command: cat /etc/os-release
[2024-06-27 10:34:24] 2024-06-27 17:34:03,684 | INFO     | cat /etc/os-release:
[2024-06-27 10:34:24] NAME="CentOS Linux"
[2024-06-27 10:34:24] VERSION="7 (Core)"
[2024-06-27 10:34:24] ID="centos"
[2024-06-27 10:34:24] ID_LIKE="rhel fedora"
[2024-06-27 10:34:24] VERSION_ID="7"
[2024-06-27 10:34:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 10:34:24] ANSI_COLOR="0;31"
[2024-06-27 10:34:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 10:34:24] HOME_URL="https://www.centos.org/"
[2024-06-27 10:34:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 10:34:24] 
[2024-06-27 10:34:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 10:34:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 10:34:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 10:34:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 10:34:24] 
[2024-06-27 10:34:24] 2024-06-27 17:34:03,685 | INFO     | *************************************
[2024-06-27 10:34:24] 2024-06-27 17:34:04,188 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 10:34:24] 2024-06-27 17:34:04,206 | INFO     | sufficient remaining disk space (1243258814464 B)
[2024-06-27 10:34:24] 2024-06-27 17:34:04,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 10:34:24] 2024-06-27 17:34:04,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 10:34:24] 2024-06-27 17:34:04,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 10:34:24] 2024-06-27 17:34:04,246 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 10:34:24] 2024-06-27 17:34:04,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 10:34:24] 2024-06-27 17:34:04,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 10:34:24] 2024-06-27 17:34:04,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:34:24] 2024-06-27 17:34:04,516 | INFO     | aborting loop
[2024-06-27 10:34:24] 2024-06-27 17:34:05,092 | INFO     | all job control threads have been joined
[2024-06-27 10:34:24] 2024-06-27 17:34:05,213 | INFO     | [job] retrieve thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:05,260 | INFO     | all data control threads have been joined
[2024-06-27 10:34:24] 2024-06-27 17:34:05,298 | INFO     | [data] copytool_in thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:05,474 | INFO     | [payload] validate_post thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:05,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 10:34:24] 2024-06-27 17:34:05,517 | INFO     | [job] job monitor thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:05,571 | INFO     | all payload control threads have been joined
[2024-06-27 10:34:24] 2024-06-27 17:34:05,748 | INFO     | [job] validate thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,097 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,098 | INFO     | [job] control thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,124 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,204 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,261 | INFO     | [data] control thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:34:24] 2024-06-27 17:34:06,576 | INFO     | [payload] control thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:06,803 | INFO     | [payload] failed_post thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:07,502 | INFO     | [job] queue monitor thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:07,502 | INFO     | [data] copytool_out thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:08,213 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:14,765 | INFO     | job.realtimelogging is not enabled
[2024-06-27 10:34:24] 2024-06-27 17:34:15,770 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 10:34:24] 2024-06-27 17:34:17,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046288385856)>', '<ExcThread(monitor, started 140045696612096)>']
[2024-06-27 10:34:24] 2024-06-27 17:34:18,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 10:34:24] 2024-06-27 17:34:18,305 | INFO     | [monitor] control thread has ended
[2024-06-27 10:34:24] 2024-06-27 17:34:22,619 | INFO     | all workflow threads have been joined
[2024-06-27 10:34:24] 2024-06-27 17:34:22,620 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 10:34:24] 2024-06-27 17:34:22,620 | INFO     | traces error code: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:22,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 10:34:24] 2024-06-27 17:34:22,710 [wrapper] ==== pilot stdout END ====
[2024-06-27 10:34:24] 2024-06-27 17:34:22,713 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 10:34:24] 2024-06-27 17:34:22,716 [wrapper] pilotpid: 25131
[2024-06-27 10:34:24] 2024-06-27 17:34:22,719 [wrapper] Pilot exit status: 0
[2024-06-27 10:34:24] 2024-06-27 17:34:22,729 [wrapper] pandaids: 6246327598
[2024-06-27 10:34:24] 2024-06-27 17:34:22,769 [wrapper] cleanup supervisor_pilot 12945 25132
[2024-06-27 10:34:24] 2024-06-27 17:34:22,772 [wrapper] Test setup, not cleaning
[2024-06-27 10:34:24] 2024-06-27 17:34:22,775 [wrapper] ==== wrapper stdout END ====
[2024-06-27 10:34:24] 2024-06-27 17:34:22,777 [wrapper] ==== wrapper stderr END ====
[2024-06-27 10:34:24] 2024-06-27 17:34:22,782 [wrapper] apfmon messages muted
[2024-06-27 10:34:24]  *** Error codes and diagnostics ***
[2024-06-27 10:34:24]     "exeErrorCode": 0,
[2024-06-27 10:34:24]     "exeErrorDiag": "",
[2024-06-27 10:34:24]     "pilotErrorCode": 0,
[2024-06-27 10:34:24]     "pilotErrorDiag": "",
[2024-06-27 10:34:24]  *** Listing of results directory ***
[2024-06-27 10:34:24] total 556632
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc    479503 Jun 21 00:51 pilot3.tar.gz
[2024-06-27 10:34:24] -rwx------ 1 boinc boinc     32220 Jun 27 09:04 runpilot2-wrapper.sh
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc      5654 Jun 27 09:04 queuedata.json
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc       100 Jun 27 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 10:34:24] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 09:05 run_atlas
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc       105 Jun 27 09:05 job.xml
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc 394178949 Jun 27 09:05 EVNT.34667973._000001.pool.root.1
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc      6484 Jun 27 09:05 init_data.xml
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:05 start_atlas.sh
[2024-06-27 10:34:24] drwxrwx--x 2 boinc boinc      4096 Jun 27 09:05 shared
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc    492532 Jun 27 09:05 input.tar.gz
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc         0 Jun 27 09:05 boinc_lockfile
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc      2588 Jun 27 09:05 pandaJob.out
[2024-06-27 10:34:24] -rw------- 1 boinc boinc       424 Jun 27 09:05 setup.sh.local
[2024-06-27 10:34:24] -rw------- 1 boinc boinc   1034827 Jun 27 09:05 agis_schedconf.cvmfs.json
[2024-06-27 10:34:24] -rw------- 1 boinc boinc         0 Jun 27 09:05 agis_ddmendpoints.agis.ALL.json
[2024-06-27 10:34:24] -rw------- 1 boinc boinc   1321363 Jun 27 09:05 cric_ddmendpoints.json
[2024-06-27 10:34:24] drwx------ 6 boinc boinc      4096 Jun 27 09:05 pilot3
[2024-06-27 10:34:24] -rw------- 1 boinc boinc 170660987 Jun 27 10:33 HITS.40102747._000059.pool.root.1
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc       529 Jun 27 10:33 boinc_task_state.xml
[2024-06-27 10:34:24] -rw------- 1 boinc boinc      1039 Jun 27 10:33 memory_monitor_summary.json
[2024-06-27 10:34:24] -rw------- 1 boinc boinc    299439 Jun 27 10:33 log.40102747._000059.job.log.tgz.1
[2024-06-27 10:34:24] -rw------- 1 boinc boinc        95 Jun 27 10:33 pilot_heartbeat.json
[2024-06-27 10:34:24] -rw------- 1 boinc boinc      7733 Jun 27 10:34 heartbeat.json
[2024-06-27 10:34:24] -rw------- 1 boinc boinc      4282 Jun 27 10:34 pilotlog.txt
[2024-06-27 10:34:24] -rw------- 1 boinc boinc    488040 Jun 27 10:34 log.40102747._000059.job.log.1
[2024-06-27 10:34:24] -rw------- 1 boinc boinc       357 Jun 27 10:34 output.list
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc       620 Jun 27 10:34 runtime_log
[2024-06-27 10:34:24] -rw------- 1 boinc boinc    808960 Jun 27 10:34 result.tar.gz
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc     11284 Jun 27 10:34 runtime_log.err
[2024-06-27 10:34:24] -rw------- 1 boinc boinc       653 Jun 27 10:34 R5cLDmem6g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmbPZKDmmOyULn.diag
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc        27 Jun 27 10:34 wrapper_checkpoint.txt
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc      8192 Jun 27 10:34 boinc_mmap_file
[2024-06-27 10:34:24] -rw-r--r-- 1 boinc boinc     21526 Jun 27 10:34 stderr.txt
[2024-06-27 10:34:24] HITS file was successfully produced:
[2024-06-27 10:34:24] -rw------- 1 boinc boinc 170660987 Jun 27 10:33 shared/HITS.pool.root.1
[2024-06-27 10:34:24]  *** Contents of shared directory: ***
[2024-06-27 10:34:24] total 552908
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc 394178949 Jun 27 09:05 ATLAS.root_0
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:05 start_atlas.sh
[2024-06-27 10:34:24] -rw-r--r-- 2 boinc boinc    492532 Jun 27 09:05 input.tar.gz
[2024-06-27 10:34:24] -rw------- 1 boinc boinc 170660987 Jun 27 10:33 HITS.pool.root.1
[2024-06-27 10:34:24] -rw------- 1 boinc boinc    808960 Jun 27 10:34 result.tar.gz
10:34:26 (21436): run_atlas exited; CPU time 32955.890166
10:34:26 (21436): called boinc_finish(0)

</stderr_txt>
]]>

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