Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:40:43 (3876253): wrapper (7.7.26015): starting
18:40:43 (3876253): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 18:40:43] Arguments: --nthreads 4
[2024-06-27 18:40:43] Threads: 4
[2024-06-27 18:40:43] Checking for CVMFS
[2024-06-27 18:40:43] No cvmfs_config command found, will try listing directly
[2024-06-27 18:40:43] CVMFS is ok
[2024-06-27 18:40:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 18:40:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 18:40:43] Further information can be found at the LHC@home message board.
[2024-06-27 18:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 18:40:43] Checking for apptainer binary...
[2024-06-27 18:40:43] which: no apptainer in ((null))
[2024-06-27 18:40:43] apptainer is not installed, using version from CVMFS
[2024-06-27 18:40:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 18:40:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-06-27 18:40:44] apptainer works
[2024-06-27 18:40:44] Set ATHENA_PROC_NUMBER=4
[2024-06-27 18:40:44] Set ATHENA_CORE_NUMBER=4
[2024-06-27 18:40:44] Starting ATLAS job with PandaID=6246276742
[2024-06-27 18:40:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 22:47:54]  *** The last 200 lines of the pilot log: ***
[2024-06-27 22:47:54] 2024-06-27 20:47:40,475 | WARNING  | GPU info not found in prmon json
[2024-06-27 22:47:54] 2024-06-27 20:47:40,475 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 22:47:54] 2024-06-27 20:47:40,475 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 22:47:54] 2024-06-27 20:47:40,480 | INFO     | fitting pss+swap vs Time
[2024-06-27 22:47:54] 2024-06-27 20:47:40,481 | INFO     | model: linear, x: [1719506488.0, 1719506549.0, 1719506610.0, 1719506671.0, 1719506732.0, 1719506793.0, 1719506854.0, 1719506915.0, 1719506976.0, 1719507037.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,481 | INFO     | sum of square deviations: 4449281562.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,483 | INFO     | sum of deviations: 93643530911.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,483 | INFO     | mean x: 1719513869.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,483 | INFO     | mean y: 2294558.4814814813
[2024-06-27 22:47:54] 2024-06-27 20:47:40,483 | INFO     | -- intersect: -36188121332.21658
[2024-06-27 22:47:54] 2024-06-27 20:47:40,483 | INFO     | intersect: -36188121332.21658
[2024-06-27 22:47:54] 2024-06-27 20:47:40,484 | INFO     | chi2: 5.165398903841515
[2024-06-27 22:47:54] 2024-06-27 20:47:40,484 | INFO     | model: linear, x: [1719506488.0, 1719506549.0, 1719506610.0, 1719506671.0, 1719506732.0, 1719506793.0, 1719506854.0, 1719506915.0, 1719506976.0, 1719507037.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,484 | INFO     | sum of square deviations: 4180243959.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,486 | INFO     | sum of deviations: 109622955491.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,486 | INFO     | mean x: 1719513716.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,487 | INFO     | mean y: 2303455.6386554623
[2024-06-27 22:47:54] 2024-06-27 20:47:40,487 | INFO     | -- intersect: -45090322103.13132
[2024-06-27 22:47:54] 2024-06-27 20:47:40,487 | INFO     | intersect: -45090322103.13132
[2024-06-27 22:47:54] 2024-06-27 20:47:40,487 | INFO     | chi2: 4.190829954907298
[2024-06-27 22:47:54] 2024-06-27 20:47:40,487 | INFO     | current chi2=4.190829954907298 (change=18.867254341371943 %)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,488 | INFO     | right removable region: 237
[2024-06-27 22:47:54] 2024-06-27 20:47:40,488 | INFO     | model: linear, x: [1719506793.0, 1719506854.0, 1719506915.0, 1719506976.0, 1719507037.0, 1719507098.0, 1719507159.0, 1719507220.0, 1719507281.0, 1719507342.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,488 | INFO     | sum of square deviations: 4180243959.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,490 | INFO     | sum of deviations: 36360408531.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,490 | INFO     | mean x: 1719514021.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,490 | INFO     | mean y: 2326955.3025210085
[2024-06-27 22:47:54] 2024-06-27 20:47:40,490 | INFO     | -- intersect: -14954271966.25923
[2024-06-27 22:47:54] 2024-06-27 20:47:40,490 | INFO     | intersect: -14954271966.25923
[2024-06-27 22:47:54] 2024-06-27 20:47:40,491 | INFO     | chi2: 2.63991883569386
[2024-06-27 22:47:54] 2024-06-27 20:47:40,491 | INFO     | current chi2=2.63991883569386 (change=48.89225624509758 %)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,491 | INFO     | model: linear, x: [1719507098.0, 1719507159.0, 1719507220.0, 1719507281.0, 1719507342.0, 1719507403.0, 1719507464.0, 1719507525.0, 1719507586.0, 1719507647.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,492 | INFO     | sum of square deviations: 3922276332.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,493 | INFO     | sum of deviations: -10111898568.999996
[2024-06-27 22:47:54] 2024-06-27 20:47:40,494 | INFO     | mean x: 1719514174.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,494 | INFO     | mean y: 2354429.755364807
[2024-06-27 22:47:54] 2024-06-27 20:47:40,494 | INFO     | -- intersect: 4435380418.666185
[2024-06-27 22:47:54] 2024-06-27 20:47:40,494 | INFO     | intersect: 4435380418.666185
[2024-06-27 22:47:54] 2024-06-27 20:47:40,494 | INFO     | chi2: 1.1101013255595717
[2024-06-27 22:47:54] 2024-06-27 20:47:40,495 | INFO     | current chi2=1.1101013255595717 (change=57.94941455964121 %)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,495 | INFO     | model: linear, x: [1719507403.0, 1719507464.0, 1719507525.0, 1719507586.0, 1719507647.0, 1719507708.0, 1719507769.0, 1719507830.0, 1719507891.0, 1719507952.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,495 | INFO     | sum of square deviations: 3675146117.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,497 | INFO     | sum of deviations: -18209756386.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,497 | INFO     | mean x: 1719514326.5
[2024-06-27 22:47:54] 2024-06-27 20:47:40,497 | INFO     | mean y: 2359384.25877193
[2024-06-27 22:47:54] 2024-06-27 20:47:40,497 | INFO     | -- intersect: 8522275597.609595
[2024-06-27 22:47:54] 2024-06-27 20:47:40,498 | INFO     | intersect: 8522275597.609595
[2024-06-27 22:47:54] 2024-06-27 20:47:40,498 | INFO     | chi2: 1.0346763307457003
[2024-06-27 22:47:54] 2024-06-27 20:47:40,498 | INFO     | current chi2=1.0346763307457003 (change=6.794424353637426 %)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,498 | INFO     | left removable region: 30
[2024-06-27 22:47:54] 2024-06-27 20:47:40,499 | INFO     | model: linear, x: [1719508318.0, 1719508379.0, 1719508440.0, 1719508501.0, 1719508562.0, 1719508623.0, 1719508684.0, 1719508745.0, 1719508806.0, 1719508867.0, 1719
[2024-06-27 22:47:54] 2024-06-27 20:47:40,499 | INFO     | sum of square deviations: 2750295288.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,500 | INFO     | sum of deviations: -3966667496.0000005
[2024-06-27 22:47:54] 2024-06-27 20:47:40,500 | INFO     | mean x: 1719514601.0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,501 | INFO     | mean y: 2372756.913043478
[2024-06-27 22:47:54] 2024-06-27 20:47:40,501 | INFO     | -- intersect: 2482376524.6699657
[2024-06-27 22:47:54] 2024-06-27 20:47:40,501 | INFO     | intersect: 2482376524.6699657
[2024-06-27 22:47:54] 2024-06-27 20:47:40,501 | INFO     | chi2: 0.012538689770004446
[2024-06-27 22:47:54] 2024-06-27 20:47:40,501 | INFO     | -- intersect: 2482376524.6699657
[2024-06-27 22:47:54] 2024-06-27 20:47:40,502 | INFO     | current memory leak: -1.44 B/s (using 207 data points, chi2=0.01)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,502 | INFO     | ..............................
[2024-06-27 22:47:54] 2024-06-27 20:47:40,502 | INFO     | . Timing measurements:
[2024-06-27 22:47:54] 2024-06-27 20:47:40,502 | INFO     | . get job = 0 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,502 | INFO     | . initial setup = 1 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | . payload setup = 3 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | . stage-in = 0 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | . payload execution = 14765 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | . stage-out = 0 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | . log creation = 0 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,503 | INFO     | ..............................
[2024-06-27 22:47:54] 2024-06-27 20:47:40,565 | INFO     | 
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | job summary report
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | --------------------------------------------------
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | PanDA job id: 6246276742
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | task id: 40102783
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | errors: (none)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | pilot state: finished 
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | transexitcode: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | exeerrorcode: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | exeerrordiag: 
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | exitcode: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | exitmsg: OK
[2024-06-27 22:47:54] 2024-06-27 20:47:40,566 | INFO     | cpuconsumptiontime: 56186 s
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | nevents: 400
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | neventsw: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | pid: 3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | pgrp: 3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | corecount: 4
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | event service: False
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | sizes: {0: 2387027, 3: 2387233, 11: 2387261, 14772: 2418200, 14773: 2427182, 14776: 2427238, 14779: 2427536}
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | --------------------------------------------------
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | 
[2024-06-27 22:47:54] 2024-06-27 20:47:40,567 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-27 22:47:54] 2024-06-27 20:47:40,581 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | job 6246276742 has completed (purged errors)
[2024-06-27 22:47:54] 2024-06-27 20:47:40,583 | INFO     | overall cleanup function is called
[2024-06-27 22:47:54] 2024-06-27 20:47:41,585 | INFO     | --- collectZombieJob: --- 10, [3887150]
[2024-06-27 22:47:54] 2024-06-27 20:47:41,585 | INFO     | zombie collector waiting for pid 3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:41,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 22:47:54] 2024-06-27 20:47:42,590 | INFO     | collected zombie processes
[2024-06-27 22:47:54] 2024-06-27 20:47:42,591 | INFO     | will now attempt to kill all subprocesses of pid=3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:42,682 | INFO     | process IDs to be killed: [3887150] (in reverse order)
[2024-06-27 22:47:54] 2024-06-27 20:47:42,733 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 22:47:54] 2024-06-27 20:47:42,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 22:47:54] 2024-06-27 20:47:42,737 | INFO     | did not find any defunct processes belonging to 3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:42,739 | INFO     | did not find any defunct processes belonging to 3887150
[2024-06-27 22:47:54] 2024-06-27 20:47:42,739 | INFO     | ready for new job
[2024-06-27 22:47:54] 2024-06-27 20:47:42,740 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 22:47:54] 2024-06-27 20:47:42,741 | INFO     | *************************************
[2024-06-27 22:47:54] 2024-06-27 20:47:42,741 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 22:47:54] 2024-06-27 20:47:42,741 | INFO     | *************************************
[2024-06-27 22:47:54] 2024-06-27 20:47:42,741 | INFO     | 
[2024-06-27 22:47:54] 2024-06-27 20:47:42,742 | INFO     | architecture information:
[2024-06-27 22:47:54] 2024-06-27 20:47:42,743 | INFO     | executing command: cat /etc/os-release
[2024-06-27 22:47:54] 2024-06-27 20:47:42,752 | INFO     | cat /etc/os-release:
[2024-06-27 22:47:54] NAME="CentOS Linux"
[2024-06-27 22:47:54] VERSION="7 (Core)"
[2024-06-27 22:47:54] ID="centos"
[2024-06-27 22:47:54] ID_LIKE="rhel fedora"
[2024-06-27 22:47:54] VERSION_ID="7"
[2024-06-27 22:47:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 22:47:54] ANSI_COLOR="0;31"
[2024-06-27 22:47:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 22:47:54] HOME_URL="https://www.centos.org/"
[2024-06-27 22:47:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 22:47:54] 
[2024-06-27 22:47:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 22:47:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 22:47:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 22:47:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 22:47:54] 
[2024-06-27 22:47:54] 2024-06-27 20:47:42,752 | INFO     | *************************************
[2024-06-27 22:47:54] 2024-06-27 20:47:43,255 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-27 22:47:54] 2024-06-27 20:47:43,270 | INFO     | sufficient remaining disk space (1692062973952 B)
[2024-06-27 22:47:54] 2024-06-27 20:47:43,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 22:47:54] 2024-06-27 20:47:43,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 22:47:54] 2024-06-27 20:47:43,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 22:47:54] 2024-06-27 20:47:43,618 | INFO     | all payload control threads have been joined
[2024-06-27 22:47:54] 2024-06-27 20:47:43,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 22:47:54] 2024-06-27 20:47:43,978 | INFO     | all job control threads have been joined
[2024-06-27 22:47:54] 2024-06-27 20:47:44,158 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 22:47:54] 2024-06-27 20:47:44,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 22:47:54] 2024-06-27 20:47:44,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 22:47:54] 2024-06-27 20:47:44,160 | INFO     | all data control threads have been joined
[2024-06-27 22:47:54] 2024-06-27 20:47:44,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 22:47:54] 2024-06-27 20:47:44,274 | INFO     | aborting loop
[2024-06-27 22:47:54] 2024-06-27 20:47:44,276 | INFO     | [job] retrieve thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:44,623 | INFO     | [payload] control thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:44,742 | INFO     | [payload] failed_post thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:44,883 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:44,984 | INFO     | [job] control thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,087 | INFO     | [job] validate thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,101 | INFO     | [data] copytool_in thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,165 | INFO     | [data] control thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,276 | INFO     | [data] copytool_out thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,278 | INFO     | [job] job monitor thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,397 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,541 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 22:47:54] 2024-06-27 20:47:45,642 | INFO     | [payload] validate_post thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:45,773 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:46,580 | INFO     | [job] queue monitor thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:47,864 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 22:47:54] 2024-06-27 20:47:48,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47039485572160)>', '<ExcThread(monitor, started 47039667947264)>']
[2024-06-27 22:47:54] 2024-06-27 20:47:49,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 22:47:54] 2024-06-27 20:47:49,180 | INFO     | [monitor] control thread has ended
[2024-06-27 22:47:54] 2024-06-27 20:47:53,408 | INFO     | all workflow threads have been joined
[2024-06-27 22:47:54] 2024-06-27 20:47:53,410 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 22:47:54] 2024-06-27 20:47:53,411 | INFO     | traces error code: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:53,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 22:47:54] 2024-06-27 20:47:53,511 [wrapper] ==== pilot stdout END ====
[2024-06-27 22:47:54] 2024-06-27 20:47:53,513 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 22:47:54] 2024-06-27 20:47:53,515 [wrapper] pilotpid: 3880353
[2024-06-27 22:47:54] 2024-06-27 20:47:53,516 [wrapper] Pilot exit status: 0
[2024-06-27 22:47:54] 2024-06-27 20:47:53,523 [wrapper] pandaids: 6246276742
[2024-06-27 22:47:54] 2024-06-27 20:47:53,556 [wrapper] cleanup supervisor_pilot   14596 3880354
[2024-06-27 22:47:54] 2024-06-27 20:47:53,559 [wrapper] Test setup, not cleaning
[2024-06-27 22:47:54] 2024-06-27 20:47:53,560 [wrapper] ==== wrapper stdout END ====
[2024-06-27 22:47:54] 2024-06-27 20:47:53,562 [wrapper] ==== wrapper stderr END ====
[2024-06-27 22:47:54] 2024-06-27 20:47:53,566 [wrapper] apfmon messages muted
[2024-06-27 22:47:54]  *** Error codes and diagnostics ***
[2024-06-27 22:47:54]     "exeErrorCode": 0,
[2024-06-27 22:47:54]     "exeErrorDiag": "",
[2024-06-27 22:47:54]     "pilotErrorCode": 0,
[2024-06-27 22:47:54]     "pilotErrorDiag": "",
[2024-06-27 22:47:54]  *** Listing of results directory ***
[2024-06-27 22:47:54] total 567552
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc    469766 Jun 27 16:34 pilot3.tar.gz
[2024-06-27 22:47:54] -rwx------ 1 boinc boinc     32220 Jun 27 17:22 runpilot2-wrapper.sh
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc      5654 Jun 27 17:22 queuedata.json
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc       100 Jun 27 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 22:47:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 17:52 run_atlas
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc       105 Jun 27 17:52 job.xml
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc      6457 Jun 27 18:40 init_data.xml
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc 397289450 Jun 27 18:40 EVNT.34668311._000001.pool.root.1
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc     17537 Jun 27 18:40 start_atlas.sh
[2024-06-27 22:47:54] drwxrwx--x 2 boinc boinc      4096 Jun 27 18:40 shared
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc    482506 Jun 27 18:40 input.tar.gz
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc         0 Jun 27 18:40 boinc_lockfile
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc      2605 Jun 27 18:40 pandaJob.out
[2024-06-27 22:47:54] -rw------- 1 boinc boinc       424 Jun 27 18:40 setup.sh.local
[2024-06-27 22:47:54] -rw------- 1 boinc boinc   1034827 Jun 27 18:41 agis_schedconf.cvmfs.json
[2024-06-27 22:47:54] -rw------- 1 boinc boinc   1321363 Jun 27 18:41 cric_ddmendpoints.json
[2024-06-27 22:47:54] drwx------ 4 boinc boinc      4096 Jun 27 18:41 pilot3
[2024-06-27 22:47:54] -rw------- 1 boinc boinc 176507628 Jun 27 22:47 HITS.40102783._000053.pool.root.1
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc       530 Jun 27 22:47 boinc_task_state.xml
[2024-06-27 22:47:54] -rw------- 1 boinc boinc      1038 Jun 27 22:47 memory_monitor_summary.json
[2024-06-27 22:47:54] -rw------- 1 boinc boinc         0 Jun 27 22:47 agis_ddmendpoints.agis.ALL.json
[2024-06-27 22:47:54] -rw------- 1 boinc boinc    354052 Jun 27 22:47 log.40102783._000053.job.log.tgz.1
[2024-06-27 22:47:54] -rw------- 1 boinc boinc      7746 Jun 27 22:47 heartbeat.json
[2024-06-27 22:47:54] -rw------- 1 boinc boinc        95 Jun 27 22:47 pilot_heartbeat.json
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc      8192 Jun 27 22:47 boinc_mmap_file
[2024-06-27 22:47:54] -rw------- 1 boinc boinc      4222 Jun 27 22:47 pilotlog.txt
[2024-06-27 22:47:54] -rw------- 1 boinc boinc   1559067 Jun 27 22:47 log.40102783._000053.job.log.1
[2024-06-27 22:47:54] -rw------- 1 boinc boinc       357 Jun 27 22:47 output.list
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc       620 Jun 27 22:47 runtime_log
[2024-06-27 22:47:54] -rw------- 1 boinc boinc   1935360 Jun 27 22:47 result.tar.gz
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc     11410 Jun 27 22:47 runtime_log.err
[2024-06-27 22:47:54] -rw------- 1 boinc boinc       658 Jun 27 22:47 cRnMDmb85g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmB9oKDmAWhWSm.diag
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc        28 Jun 27 22:47 wrapper_checkpoint.txt
[2024-06-27 22:47:54] -rw-r--r-- 1 boinc boinc     21255 Jun 27 22:47 stderr.txt
[2024-06-27 22:47:54] HITS file was successfully produced:
[2024-06-27 22:47:54] -rw------- 1 boinc boinc 176507628 Jun 27 22:47 shared/HITS.pool.root.1
[2024-06-27 22:47:54]  *** Contents of shared directory: ***
[2024-06-27 22:47:54] total 562744
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc 397289450 Jun 27 18:40 ATLAS.root_0
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc     17537 Jun 27 18:40 start_atlas.sh
[2024-06-27 22:47:54] -rw-r--r-- 2 boinc boinc    482506 Jun 27 18:40 input.tar.gz
[2024-06-27 22:47:54] -rw------- 1 boinc boinc 176507628 Jun 27 22:47 HITS.pool.root.1
[2024-06-27 22:47:54] -rw------- 1 boinc boinc   1935360 Jun 27 22:47 result.tar.gz
22:47:55 (3876253): run_atlas exited; CPU time 56028.124644
22:47:55 (3876253): called boinc_finish(0)

</stderr_txt>
]]>

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