Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:25 (2512407): wrapper (7.7.26015): starting
16:53:25 (2512407): wrapper: running run_atlas (--nthreads 4)
[2024-06-28 16:53:25] Arguments: --nthreads 4
[2024-06-28 16:53:25] Threads: 4
[2024-06-28 16:53:25] Checking for CVMFS
[2024-06-28 16:53:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-28 16:53:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-28 16:53:25] Running cvmfs_config stat atlas.cern.ch
[2024-06-28 16:53:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-28 16:53:26] 2.11.3.0 1853111 616 59636 134379 1 186 20192325 31457280 2701 130560 0 1570153 99.997 97129 837 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-28 16:53:26] CVMFS is ok
[2024-06-28 16:53:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-28 16:53:26] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-28 16:53:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-28 16:53:26] Further information can be found at the LHC@home message board.
[2024-06-28 16:53:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-28 16:53:26] Checking for apptainer binary...
[2024-06-28 16:53:26] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-28 16:53:26] Running /usr/bin/apptainer --version
[2024-06-28 16:53:26] apptainer version 1.3.2-1.el9
[2024-06-28 16:53:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-28 16:53:26] Atto003
[2024-06-28 16:53:26] apptainer works
[2024-06-28 16:53:26] Set ATHENA_PROC_NUMBER=4
[2024-06-28 16:53:26] Set ATHENA_CORE_NUMBER=4
[2024-06-28 16:53:26] Starting ATLAS job with PandaID=6246226861
[2024-06-28 16:53:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 22:58:05]  *** The last 200 lines of the pilot log: ***
[2024-06-28 22:58:05] 2024-06-28 13:57:43,877 | INFO     | model: linear, x: [1719561845.0, 1719561906.0, 1719561967.0, 1719562028.0, 1719562089.0, 1719562150.0, 1719562211.0, 1719562272.0, 1719562333.0, 1719562394.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,877 | INFO     | sum of square deviations: 13068101066.988474
[2024-06-28 22:58:05] 2024-06-28 13:57:43,879 | INFO     | sum of deviations: 106854407885.02296
[2024-06-28 22:58:05] 2024-06-28 13:57:43,879 | INFO     | mean x: 1719572428.505747
[2024-06-28 22:58:05] 2024-06-28 13:57:43,879 | INFO     | mean y: 2364963.238505747
[2024-06-28 22:58:05] 2024-06-28 13:57:43,879 | INFO     | -- intersect: -14058124217.362553
[2024-06-28 22:58:05] 2024-06-28 13:57:43,879 | INFO     | intersect: -14058124217.362553
[2024-06-28 22:58:05] 2024-06-28 13:57:43,880 | INFO     | chi2: 1.110404096627256
[2024-06-28 22:58:05] 2024-06-28 13:57:43,880 | INFO     | current chi2=1.110404096627256 (change=52.99927032479832 %)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,880 | INFO     | model: linear, x: [1719562150.0, 1719562211.0, 1719562272.0, 1719562333.0, 1719562394.0, 1719562455.0, 1719562516.0, 1719562577.0, 1719562638.0, 1719562699.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,880 | INFO     | sum of square deviations: 12512871441.988361
[2024-06-28 22:58:05] 2024-06-28 13:57:43,882 | INFO     | sum of deviations: 47723048472.3032
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | mean x: 1719572581.005831
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | mean y: 2381196.8483965015
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | -- intersect: -6555925265.057082
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | intersect: -6555925265.057082
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | chi2: 0.020488351639282212
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | current chi2=0.020488351639282212 (change=98.15487427491365 %)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,883 | INFO     | model: linear, x: [1719562455.0, 1719562516.0, 1719562577.0, 1719562638.0, 1719562699.0, 1719562760.0, 1719562821.0, 1719562882.0, 1719562943.0, 1719563004.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,884 | INFO     | sum of square deviations: 11973595604.488123
[2024-06-28 22:58:05] 2024-06-28 13:57:43,886 | INFO     | sum of deviations: 48058650246.20714
[2024-06-28 22:58:05] 2024-06-28 13:57:43,886 | INFO     | mean x: 1719572733.505917
[2024-06-28 22:58:05] 2024-06-28 13:57:43,886 | INFO     | mean y: 2381092.396449704
[2024-06-28 22:58:05] 2024-06-28 13:57:43,886 | INFO     | -- intersect: -6899500957.261109
[2024-06-28 22:58:05] 2024-06-28 13:57:43,888 | INFO     | intersect: -6899500957.261109
[2024-06-28 22:58:05] 2024-06-28 13:57:43,888 | INFO     | chi2: 0.009388076928373785
[2024-06-28 22:58:05] 2024-06-28 13:57:43,888 | INFO     | current chi2=0.009388076928373785 (change=54.17846641027933 %)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,889 | INFO     | model: linear, x: [1719562760.0, 1719562821.0, 1719562882.0, 1719562943.0, 1719563004.0, 1719563065.0, 1719563126.0, 1719563187.0, 1719563248.0, 1719563309.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,889 | INFO     | sum of square deviations: 11450040991.987974
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | sum of deviations: 46075218586.789795
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | mean x: 1719572886.006006
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | mean y: 2381675.1051051053
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | -- intersect: -6917217709.218821
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | intersect: -6917217709.218821
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | chi2: 0.006235459226757361
[2024-06-28 22:58:05] 2024-06-28 13:57:43,891 | INFO     | current chi2=0.006235459226757361 (change=33.58108082911209 %)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,892 | INFO     | model: linear, x: [1719563065.0, 1719563126.0, 1719563187.0, 1719563248.0, 1719563309.0, 1719563370.0, 1719563431.0, 1719563492.0, 1719563553.0, 1719563614.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,892 | INFO     | sum of square deviations: 10941975041.987799
[2024-06-28 22:58:05] 2024-06-28 13:57:43,893 | INFO     | sum of deviations: 42728253266.25612
[2024-06-28 22:58:05] 2024-06-28 13:57:43,893 | INFO     | mean x: 1719573038.5060976
[2024-06-28 22:58:05] 2024-06-28 13:57:43,893 | INFO     | mean y: 2382679.8719512196
[2024-06-28 22:58:05] 2024-06-28 13:57:43,893 | INFO     | -- intersect: -6712525005.1821575
[2024-06-28 22:58:05] 2024-06-28 13:57:43,893 | INFO     | intersect: -6712525005.1821575
[2024-06-28 22:58:05] 2024-06-28 13:57:43,894 | INFO     | chi2: 0.00560641555479877
[2024-06-28 22:58:05] 2024-06-28 13:57:43,894 | INFO     | current chi2=0.00560641555479877 (change=10.088169116065464 %)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,894 | INFO     | left removable region: 60
[2024-06-28 22:58:05] 2024-06-28 13:57:43,894 | INFO     | model: linear, x: [1719564895.0, 1719564956.0, 1719565017.0, 1719565078.0, 1719565139.0, 1719565200.0, 1719565261.0, 1719565322.0, 1719565383.0, 1719565444.0, 1719
[2024-06-28 22:58:05] 2024-06-28 13:57:43,894 | INFO     | sum of square deviations: 7720073564.986256
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | sum of deviations: 26338843340.49313
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | mean x: 1719573770.5068493
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | mean y: 2387475.7534246575
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | -- intersect: -5864342131.489848
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | intersect: -5864342131.489848
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | chi2: 0.0034160137188550127
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | -- intersect: -5864342131.489848
[2024-06-28 22:58:05] 2024-06-28 13:57:43,896 | INFO     | current memory leak: 3.41 B/s (using 292 data points, chi2=0.00)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | ..............................
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . Timing measurements:
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . get job = 0 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . initial setup = 3 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . payload setup = 3 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . stage-in = 0 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . payload execution = 21819 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . stage-out = 4 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,897 | INFO     | . log creation = 0 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,898 | INFO     | ..............................
[2024-06-28 22:58:05] 2024-06-28 13:57:43,966 | INFO     | 
[2024-06-28 22:58:05] 2024-06-28 13:57:43,966 | WARNING  | process 2522804 is no longer using CPU - aborting
[2024-06-28 22:58:05] 2024-06-28 13:57:43,966 | INFO     | job summary report
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | aborting job monitoring since job object (job id=6246226861) has expired
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | --------------------------------------------------
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | PanDA job id: 6246226861
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | task id: 40102847
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | errors: (none)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | pilot state: finished 
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | transexitcode: 0
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | exeerrorcode: 0
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | exeerrordiag: 
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | exitcode: 0
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | exitmsg: OK
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | cpuconsumptiontime: 83121 s
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | nevents: 400
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | neventsw: 0
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | pid: 2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | pgrp: 2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | corecount: 4
[2024-06-28 22:58:05] 2024-06-28 13:57:43,967 | INFO     | event service: False
[2024-06-28 22:58:05] 2024-06-28 13:57:43,968 | INFO     | sizes: {0: 2387014, 3: 2387220, 11: 2387248, 21826: 2421644, 21830: 2430604, 21831: 2430660, 21836: 2430958}
[2024-06-28 22:58:05] 2024-06-28 13:57:43,968 | INFO     | --------------------------------------------------
[2024-06-28 22:58:05] 2024-06-28 13:57:43,968 | INFO     | 
[2024-06-28 22:58:05] 2024-06-28 13:57:43,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2024-06-28 22:58:05] 2024-06-28 13:57:43,983 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,983 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,983 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,984 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 22:58:05] 2024-06-28 13:57:43,985 | INFO     | job 6246226861 has completed (purged errors)
[2024-06-28 22:58:05] 2024-06-28 13:57:43,985 | INFO     | overall cleanup function is called
[2024-06-28 22:58:05] 2024-06-28 13:57:44,991 | INFO     | --- collectZombieJob: --- 10, [2522804]
[2024-06-28 22:58:05] 2024-06-28 13:57:44,991 | INFO     | zombie collector waiting for pid 2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:44,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 22:58:05] 2024-06-28 13:57:45,996 | INFO     | collected zombie processes
[2024-06-28 22:58:05] 2024-06-28 13:57:45,996 | INFO     | will now attempt to kill all subprocesses of pid=2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:46,076 | INFO     | process IDs to be killed: [2522804] (in reverse order)
[2024-06-28 22:58:05] 2024-06-28 13:57:46,122 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 22:58:05] 2024-06-28 13:57:46,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 22:58:05] 2024-06-28 13:57:46,127 | INFO     | did not find any defunct processes belonging to 2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:46,131 | INFO     | did not find any defunct processes belonging to 2522804
[2024-06-28 22:58:05] 2024-06-28 13:57:46,132 | INFO     | ready for new job
[2024-06-28 22:58:05] 2024-06-28 13:57:46,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 22:58:05] 2024-06-28 13:57:46,133 | INFO     | *************************************
[2024-06-28 22:58:05] 2024-06-28 13:57:46,133 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 22:58:05] 2024-06-28 13:57:46,133 | INFO     | *************************************
[2024-06-28 22:58:05] 2024-06-28 13:57:46,134 | INFO     | 
[2024-06-28 22:58:05] 2024-06-28 13:57:46,146 | INFO     | architecture information:
[2024-06-28 22:58:05] 2024-06-28 13:57:46,146 | INFO     | executing command: cat /etc/os-release
[2024-06-28 22:58:05] 2024-06-28 13:57:46,160 | INFO     | cat /etc/os-release:
[2024-06-28 22:58:05] NAME="CentOS Linux"
[2024-06-28 22:58:05] VERSION="7 (Core)"
[2024-06-28 22:58:05] ID="centos"
[2024-06-28 22:58:05] ID_LIKE="rhel fedora"
[2024-06-28 22:58:05] VERSION_ID="7"
[2024-06-28 22:58:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 22:58:05] ANSI_COLOR="0;31"
[2024-06-28 22:58:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 22:58:05] HOME_URL="https://www.centos.org/"
[2024-06-28 22:58:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 22:58:05] 
[2024-06-28 22:58:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 22:58:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 22:58:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 22:58:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 22:58:05] 
[2024-06-28 22:58:05] 2024-06-28 13:57:46,160 | INFO     | *************************************
[2024-06-28 22:58:05] 2024-06-28 13:57:46,662 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2024-06-28 22:58:05] 2024-06-28 13:57:46,674 | INFO     | sufficient remaining disk space (134604652544 B)
[2024-06-28 22:58:05] 2024-06-28 13:57:46,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 22:58:05] 2024-06-28 13:57:46,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 22:58:05] 2024-06-28 13:57:46,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-28 22:58:05] 2024-06-28 13:57:46,675 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 22:58:05] 2024-06-28 13:57:46,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 22:58:05] 2024-06-28 13:57:46,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 22:58:05] 2024-06-28 13:57:46,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 22:58:05] 2024-06-28 13:57:47,095 | INFO     | all data control threads have been joined
[2024-06-28 22:58:05] 2024-06-28 13:57:47,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 22:58:05] 2024-06-28 13:57:47,474 | INFO     | aborting loop
[2024-06-28 22:58:05] 2024-06-28 13:57:47,585 | INFO     | all job control threads have been joined
[2024-06-28 22:58:05] 2024-06-28 13:57:47,679 | INFO     | [job] retrieve thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:47,841 | INFO     | all payload control threads have been joined
[2024-06-28 22:58:05] 2024-06-28 13:57:48,012 | INFO     | [payload] failed_post thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,111 | INFO     | [data] control thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,423 | INFO     | [payload] validate_post thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,439 | INFO     | [job] validate thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,460 | INFO     | [data] copytool_in thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,479 | INFO     | [job] job monitor thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,587 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,590 | INFO     | [job] control thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,801 | INFO     | [data] copytool_out thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,846 | INFO     | [payload] control thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,892 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,948 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:48,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 22:58:05] 2024-06-28 13:57:49,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 22:58:05] 2024-06-28 13:57:49,978 | INFO     | [job] queue monitor thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:53,365 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:57:57,621 | INFO     | job.realtimelogging is not enabled
[2024-06-28 22:58:05] 2024-06-28 13:57:58,626 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 22:58:05] 2024-06-28 13:58:00,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192093828928)>', '<ExcThread(monitor, started 140191473850112)>']
[2024-06-28 22:58:05] 2024-06-28 13:58:00,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 22:58:05] 2024-06-28 13:58:00,744 | INFO     | [monitor] control thread has ended
[2024-06-28 22:58:05] 2024-06-28 13:58:05,419 | INFO     | all workflow threads have been joined
[2024-06-28 22:58:05] 2024-06-28 13:58:05,419 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 22:58:05] 2024-06-28 13:58:05,419 | INFO     | traces error code: 0
[2024-06-28 22:58:05] 2024-06-28 13:58:05,419 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 22:58:05] 2024-06-28 13:58:05,489 [wrapper] ==== pilot stdout END ====
[2024-06-28 22:58:05] 2024-06-28 13:58:05,491 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 22:58:05] 2024-06-28 13:58:05,493 [wrapper] pilotpid: 2516184
[2024-06-28 22:58:05] 2024-06-28 13:58:05,494 [wrapper] Pilot exit status: 0
[2024-06-28 22:58:05] 2024-06-28 13:58:05,503 [wrapper] pandaids: 6246226861
[2024-06-28 22:58:05] 2024-06-28 13:58:05,534 [wrapper] cleanup supervisor_pilot 2688996 2516185
[2024-06-28 22:58:05] 2024-06-28 13:58:05,536 [wrapper] Test setup, not cleaning
[2024-06-28 22:58:05] 2024-06-28 13:58:05,537 [wrapper] ==== wrapper stdout END ====
[2024-06-28 22:58:05] 2024-06-28 13:58:05,539 [wrapper] ==== wrapper stderr END ====
[2024-06-28 22:58:05] 2024-06-28 13:58:05,543 [wrapper] apfmon messages muted
[2024-06-28 22:58:05]  *** Error codes and diagnostics ***
[2024-06-28 22:58:05]     "exeErrorCode": 0,
[2024-06-28 22:58:05]     "exeErrorDiag": "",
[2024-06-28 22:58:05]     "pilotErrorCode": 0,
[2024-06-28 22:58:05]     "pilotErrorDiag": "",
[2024-06-28 22:58:05]  *** Listing of results directory ***
[2024-06-28 22:58:05] total 586428
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc    469766 Jun 27 23:34 pilot3.tar.gz
[2024-06-28 22:58:05] -rwx------. 1 boinc boinc     32220 Jun 27 23:37 runpilot2-wrapper.sh
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc      5654 Jun 27 23:37 queuedata.json
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc       100 Jun 28 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 22:58:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun 28 16:53 run_atlas
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc       105 Jun 28 16:53 job.xml
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc 395391238 Jun 28 16:53 EVNT.34668784._000002.pool.root.1
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc     17537 Jun 28 16:53 start_atlas.sh
[2024-06-28 22:58:05] drwxrwx--x. 2 boinc boinc        68 Jun 28 16:53 shared
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc    482492 Jun 28 16:53 input.tar.gz
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc         0 Jun 28 16:53 boinc_lockfile
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc      2587 Jun 28 16:53 pandaJob.out
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc       424 Jun 28 16:53 setup.sh.local
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc   1036922 Jun 28 16:53 agis_schedconf.cvmfs.json
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc   1321378 Jun 28 16:53 cric_ddmendpoints.json
[2024-06-28 22:58:05] drwx------. 4 boinc boinc      4096 Jun 28 16:53 pilot3
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc      9501 Jun 28 16:53 init_data.xml
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc 195797915 Jun 28 22:57 HITS.40102847._000056.pool.root.1
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc       531 Jun 28 22:57 boinc_task_state.xml
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc      1017 Jun 28 22:57 memory_monitor_summary.json
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc        95 Jun 28 22:57 pilot_heartbeat.json
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc         0 Jun 28 22:57 agis_ddmendpoints.agis.ALL.json
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc    430171 Jun 28 22:57 log.40102847._000056.job.log.tgz.1
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc      7641 Jun 28 22:57 heartbeat.json
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc      8192 Jun 28 22:57 boinc_mmap_file
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc        28 Jun 28 22:57 wrapper_checkpoint.txt
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc      4407 Jun 28 22:58 pilotlog.txt
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc   2453024 Jun 28 22:58 log.40102847._000056.job.log.1
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc       357 Jun 28 22:58 output.list
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc       620 Jun 28 22:58 runtime_log
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc   2897920 Jun 28 22:58 result.tar.gz
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc     10948 Jun 28 22:58 runtime_log.err
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc       633 Jun 28 22:58 qXHODmUQ5g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmSOZKDmwfix3n.diag
[2024-06-28 22:58:05] -rw-r--r--. 1 boinc boinc     21783 Jun 28 22:58 stderr.txt
[2024-06-28 22:58:05] HITS file was successfully produced:
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc 195797915 Jun 28 22:57 shared/HITS.pool.root.1
[2024-06-28 22:58:05]  *** Contents of shared directory: ***
[2024-06-28 22:58:05] total 580668
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc 395391238 Jun 28 16:53 ATLAS.root_0
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc     17537 Jun 28 16:53 start_atlas.sh
[2024-06-28 22:58:05] -rw-r--r--. 2 boinc boinc    482492 Jun 28 16:53 input.tar.gz
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc 195797915 Jun 28 22:57 HITS.pool.root.1
[2024-06-28 22:58:05] -rw-------. 1 boinc boinc   2897920 Jun 28 22:58 result.tar.gz
22:58:07 (2512407): run_atlas exited; CPU time 82987.860816
22:58:07 (2512407): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN