Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:36:02 (1344926): wrapper (7.7.26015): starting
21:36:02 (1344926): wrapper: running run_atlas (--nthreads 6)
[2024-06-27 21:36:02] Arguments: --nthreads 6
[2024-06-27 21:36:02] Threads: 6
[2024-06-27 21:36:02] Checking for CVMFS
[2024-06-27 21:36:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 21:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 21:36:02] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 21:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 21:36:02] 2.11.2.0 1110452 374 63328 134353 2 187 5926053 6144000 915 130560 0 804920 99.925 43361 3437 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-27 21:36:02] CVMFS is ok
[2024-06-27 21:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 21:36:02] Checking for apptainer binary...
[2024-06-27 21:36:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 21:36:02] Running /usr/bin/apptainer --version
[2024-06-27 21:36:02] apptainer version 1.3.0
[2024-06-27 21:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 21:36:02] Ryzen8
[2024-06-27 21:36:02] apptainer works
[2024-06-27 21:36:02] Set ATHENA_PROC_NUMBER=6
[2024-06-27 21:36:02] Set ATHENA_CORE_NUMBER=6
[2024-06-27 21:36:02] Starting ATLAS job with PandaID=6246092924
[2024-06-27 21:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 23:30:28]  *** The last 200 lines of the pilot log: ***
[2024-06-27 23:30:28] 2024-06-27 21:30:04,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 23:30:28] 2024-06-27 21:30:07,557 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6246092924/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | INFO     | extracted standard info from prmon json
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | WARNING  | GPU info not found in prmon json
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 23:30:28] 2024-06-27 21:30:07,558 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 23:30:28] 2024-06-27 21:30:07,559 | INFO     | fitting pss+swap vs Time
[2024-06-27 23:30:28] 2024-06-27 21:30:07,559 | INFO     | model: linear, x: [1719516984.0, 1719517045.0, 1719517106.0, 1719517167.0, 1719517228.0, 1719517289.0, 1719517350.0, 1719517411.0, 1719517472.0, 1719517533.0, 1719
[2024-06-27 23:30:28] 2024-06-27 21:30:07,559 | INFO     | sum of square deviations: 435610028.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,559 | INFO     | sum of deviations: 14658292283.500004
[2024-06-27 23:30:28] 2024-06-27 21:30:07,559 | INFO     | mean x: 1719520369.5
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | mean y: 2444307.2589285714
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | -- intersect: -57859474710.73697
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | intersect: -57859474710.73697
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | chi2: 1.9944976936063594
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | model: linear, x: [1719516984.0, 1719517045.0, 1719517106.0, 1719517167.0, 1719517228.0, 1719517289.0, 1719517350.0, 1719517411.0, 1719517472.0, 1719517533.0, 1719
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | sum of square deviations: 379832238.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | sum of deviations: 13719318581.999996
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | mean x: 1719520217.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | mean y: 2441738.3457943927
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | -- intersect: -62105624152.60885
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | intersect: -62105624152.60885
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | chi2: 1.999242948039964
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | current chi2=1.999242948039964 (change=-0.2379172685341379 %)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | right removable region: 106
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | model: linear, x: [1719517289.0, 1719517350.0, 1719517411.0, 1719517472.0, 1719517533.0, 1719517594.0, 1719517655.0, 1719517716.0, 1719517777.0, 1719517838.0, 1719
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | sum of square deviations: 379832238.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | sum of deviations: -7230720582.999998
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | mean x: 1719520522.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | mean y: 2503457.5981308413
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | -- intersect: 32736355899.36033
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | intersect: 32736355899.36033
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | chi2: 0.07206234434832749
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | current chi2=0.07206234434832749 (change=96.38694270846572 %)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | model: linear, x: [1719517594.0, 1719517655.0, 1719517716.0, 1719517777.0, 1719517838.0, 1719517899.0, 1719517960.0, 1719518021.0, 1719518082.0, 1719518143.0, 1719
[2024-06-27 23:30:28] 2024-06-27 21:30:07,560 | INFO     | sum of square deviations: 329031285.5
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | sum of deviations: -6124929297.0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | mean x: 1719520674.5
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | mean y: 2500035.470588235
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | -- intersect: 32011439671.826992
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | intersect: 32011439671.826992
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | chi2: 0.06434122700098738
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | current chi2=0.06434122700098738 (change=10.714496478241921 %)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | left removable region: 20
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | model: linear, x: [1719518204.0, 1719518265.0, 1719518326.0, 1719518387.0, 1719518448.0, 1719518509.0, 1719518570.0, 1719518631.0, 1719518692.0, 1719518753.0, 1719
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | sum of square deviations: 197203697.5
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | sum of deviations: -1449525340.4999988
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | mean x: 1719520796.5
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | mean y: 2481515.2209302327
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | -- intersect: 12641640920.654957
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | intersect: 12641640920.654957
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | chi2: 0.03672352504768012
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | -- intersect: 12641640920.654957
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | current memory leak: -7.35 B/s (using 86 data points, chi2=0.04)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | ..............................
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . Timing measurements:
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . get job = 0 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . initial setup = 1 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . payload setup = 2 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . stage-in = 0 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . payload execution = 6819 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . stage-out = 0 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | . log creation = 0 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,561 | INFO     | ..............................
[2024-06-27 23:30:28] 2024-06-27 21:30:07,587 | INFO     | 
[2024-06-27 23:30:28] 2024-06-27 21:30:07,587 | INFO     | job summary report
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | --------------------------------------------------
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | PanDA job id: 6246092924
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | task id: 40102839
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | errors: (none)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | pilot state: finished 
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | transexitcode: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | exeerrorcode: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | exeerrordiag: 
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | exitcode: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | exitmsg: OK
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | cpuconsumptiontime: 36256 s
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | nevents: 400
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | neventsw: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | pid: 1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | pgrp: 1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | corecount: 6
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | event service: False
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | sizes: {0: 2387002, 2: 2387208, 11: 2387236, 6825: 2423368, 6828: 2423482}
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | --------------------------------------------------
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | 
[2024-06-27 23:30:28] 2024-06-27 21:30:07,588 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | job 6246092924 has completed (purged errors)
[2024-06-27 23:30:28] 2024-06-27 21:30:07,599 | INFO     | overall cleanup function is called
[2024-06-27 23:30:28] 2024-06-27 21:30:08,602 | INFO     | --- collectZombieJob: --- 10, [1355097]
[2024-06-27 23:30:28] 2024-06-27 21:30:08,602 | INFO     | zombie collector waiting for pid 1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:08,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 23:30:28] 2024-06-27 21:30:09,304 | WARNING  | process 1355097 is no longer using CPU - aborting
[2024-06-27 23:30:28] 2024-06-27 21:30:09,304 | INFO     | aborting job monitoring since job object (job id=6246092924) has expired
[2024-06-27 23:30:28] 2024-06-27 21:30:09,606 | INFO     | collected zombie processes
[2024-06-27 23:30:28] 2024-06-27 21:30:09,606 | INFO     | will now attempt to kill all subprocesses of pid=1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:09,641 | INFO     | process IDs to be killed: [1355097] (in reverse order)
[2024-06-27 23:30:28] 2024-06-27 21:30:09,669 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 23:30:28] 2024-06-27 21:30:09,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 23:30:28] 2024-06-27 21:30:09,671 | INFO     | did not find any defunct processes belonging to 1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:09,673 | INFO     | did not find any defunct processes belonging to 1355097
[2024-06-27 23:30:28] 2024-06-27 21:30:09,673 | INFO     | ready for new job
[2024-06-27 23:30:28] 2024-06-27 21:30:09,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | *************************************
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | *************************************
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | 
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | architecture information:
[2024-06-27 23:30:28] 2024-06-27 21:30:09,674 | INFO     | executing command: cat /etc/os-release
[2024-06-27 23:30:28] 2024-06-27 21:30:09,681 | INFO     | cat /etc/os-release:
[2024-06-27 23:30:28] NAME="CentOS Linux"
[2024-06-27 23:30:28] VERSION="7 (Core)"
[2024-06-27 23:30:28] ID="centos"
[2024-06-27 23:30:28] ID_LIKE="rhel fedora"
[2024-06-27 23:30:28] VERSION_ID="7"
[2024-06-27 23:30:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 23:30:28] ANSI_COLOR="0;31"
[2024-06-27 23:30:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 23:30:28] HOME_URL="https://www.centos.org/"
[2024-06-27 23:30:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 23:30:28] 
[2024-06-27 23:30:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 23:30:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 23:30:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 23:30:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 23:30:28] 
[2024-06-27 23:30:28] 2024-06-27 21:30:09,681 | INFO     | *************************************
[2024-06-27 23:30:28] 2024-06-27 21:30:10,182 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-06-27 23:30:28] 2024-06-27 21:30:10,189 | INFO     | sufficient remaining disk space (110855454720 B)
[2024-06-27 23:30:28] 2024-06-27 21:30:10,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 23:30:28] 2024-06-27 21:30:10,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | INFO     | will abort loop
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 23:30:28] 2024-06-27 21:30:10,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 23:30:28] 2024-06-27 21:30:10,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 23:30:28] 2024-06-27 21:30:11,071 | INFO     | all data control threads have been joined
[2024-06-27 23:30:28] 2024-06-27 21:30:11,084 | INFO     | all payload control threads have been joined
[2024-06-27 23:30:28] 2024-06-27 21:30:11,194 | INFO     | [job] retrieve thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:11,195 | INFO     | [job] job monitor thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:11,325 | INFO     | all job control threads have been joined
[2024-06-27 23:30:28] 2024-06-27 21:30:11,461 | INFO     | [data] copytool_in thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:11,598 | INFO     | [payload] validate_post thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,077 | INFO     | [data] control thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,089 | INFO     | [payload] control thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,192 | INFO     | [data] copytool_out thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,312 | INFO     | [job] validate thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,329 | INFO     | [job] control thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,412 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,422 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,572 | INFO     | [payload] failed_post thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,576 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:12,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 23:30:28] 2024-06-27 21:30:13,603 | INFO     | [job] queue monitor thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:14,546 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:21,076 | INFO     | job.realtimelogging is not enabled
[2024-06-27 23:30:28] 2024-06-27 21:30:22,079 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 23:30:28] 2024-06-27 21:30:23,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140055379502912)>', '<ExcThread(monitor, started 140054898919168)>']
[2024-06-27 23:30:28] 2024-06-27 21:30:24,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 23:30:28] 2024-06-27 21:30:24,249 | INFO     | [monitor] control thread has ended
[2024-06-27 23:30:28] 2024-06-27 21:30:28,759 | INFO     | all workflow threads have been joined
[2024-06-27 23:30:28] 2024-06-27 21:30:28,759 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 23:30:28] 2024-06-27 21:30:28,759 | INFO     | traces error code: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:28,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 23:30:28] 2024-06-27 21:30:28,808 [wrapper] ==== pilot stdout END ====
[2024-06-27 23:30:28] 2024-06-27 21:30:28,810 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 23:30:28] 2024-06-27 21:30:28,811 [wrapper] pilotpid: 1348612
[2024-06-27 23:30:28] 2024-06-27 21:30:28,812 [wrapper] Pilot exit status: 0
[2024-06-27 23:30:28] 2024-06-27 21:30:28,817 [wrapper] pandaids: 6246092924
[2024-06-27 23:30:28] 2024-06-27 21:30:28,830 [wrapper] cleanup supervisor_pilot 1394968 1348613
[2024-06-27 23:30:28] 2024-06-27 21:30:28,831 [wrapper] Test setup, not cleaning
[2024-06-27 23:30:28] 2024-06-27 21:30:28,832 [wrapper] ==== wrapper stdout END ====
[2024-06-27 23:30:28] 2024-06-27 21:30:28,833 [wrapper] ==== wrapper stderr END ====
[2024-06-27 23:30:28] 2024-06-27 21:30:28,835 [wrapper] apfmon messages muted
[2024-06-27 23:30:28]  *** Error codes and diagnostics ***
[2024-06-27 23:30:28]     "exeErrorCode": 0,
[2024-06-27 23:30:28]     "exeErrorDiag": "",
[2024-06-27 23:30:28]     "pilotErrorCode": 0,
[2024-06-27 23:30:28]     "pilotErrorDiag": "",
[2024-06-27 23:30:28]  *** Listing of results directory ***
[2024-06-27 23:30:28] insgesamt 569204
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc    469766 27. Jun 14:42 pilot3.tar.gz
[2024-06-27 23:30:28] -rwx------ 1 boinc boinc     32220 27. Jun 14:42 runpilot2-wrapper.sh
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc      5654 27. Jun 14:51 queuedata.json
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc       100 27. Jun 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 23:30:28] -rwxr-xr-x 1 boinc boinc      7986 27. Jun 21:36 run_atlas
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc       105 27. Jun 21:36 job.xml
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc     17537 27. Jun 21:36 start_atlas.sh
[2024-06-27 23:30:28] drwxrwx--x 2 boinc boinc      4096 27. Jun 21:36 shared
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc    482496 27. Jun 21:36 input.tar.gz
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc      7159 27. Jun 21:36 init_data.xml
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc 394345519 27. Jun 21:36 EVNT.34668752._000001.pool.root.1
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc         0 27. Jun 21:36 boinc_lockfile
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc      2592 27. Jun 21:36 pandaJob.out
[2024-06-27 23:30:28] -rw------- 1 boinc boinc       461 27. Jun 21:36 setup.sh.local
[2024-06-27 23:30:28] -rw------- 1 boinc boinc   1034827 27. Jun 21:36 agis_schedconf.cvmfs.json
[2024-06-27 23:30:28] -rw------- 1 boinc boinc         0 27. Jun 21:36 agis_ddmendpoints.agis.ALL.json
[2024-06-27 23:30:28] -rw------- 1 boinc boinc   1321363 27. Jun 21:36 cric_ddmendpoints.json
[2024-06-27 23:30:28] drwx------ 4 boinc boinc      4096 27. Jun 21:36 pilot3
[2024-06-27 23:30:28] -rw------- 1 boinc boinc        95 27. Jun 23:29 pilot_heartbeat.json
[2024-06-27 23:30:28] -rw------- 1 boinc boinc 183125489 27. Jun 23:29 HITS.40102839._000005.pool.root.1
[2024-06-27 23:30:28] -rw------- 1 boinc boinc      1022 27. Jun 23:30 memory_monitor_summary.json
[2024-06-27 23:30:28] -rw------- 1 boinc boinc    279549 27. Jun 23:30 log.40102839._000005.job.log.tgz.1
[2024-06-27 23:30:28] -rw------- 1 boinc boinc      7660 27. Jun 23:30 heartbeat.json
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc       529 27. Jun 23:30 boinc_task_state.xml
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc      8192 27. Jun 23:30 boinc_mmap_file
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc        27 27. Jun 23:30 wrapper_checkpoint.txt
[2024-06-27 23:30:28] -rw------- 1 boinc boinc      4410 27. Jun 23:30 pilotlog.txt
[2024-06-27 23:30:28] -rw------- 1 boinc boinc    646627 27. Jun 23:30 log.40102839._000005.job.log.1
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc       620 27. Jun 23:30 runtime_log
[2024-06-27 23:30:28] -rw------- 1 boinc boinc    942080 27. Jun 23:30 result.tar.gz
[2024-06-27 23:30:28] -rw------- 1 boinc boinc       357 27. Jun 23:30 output.list
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc     11349 27. Jun 23:30 runtime_log.err
[2024-06-27 23:30:28] -rw------- 1 boinc boinc       632 27. Jun 23:30 AZnNDmsd3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmY6rKDmBLI2un.diag
[2024-06-27 23:30:28] -rw-r--r-- 1 boinc boinc     21340 27. Jun 23:30 stderr.txt
[2024-06-27 23:30:28] HITS file was successfully produced:
[2024-06-27 23:30:28] -rw------- 1 boinc boinc 183125489 27. Jun 23:29 shared/HITS.pool.root.1
[2024-06-27 23:30:28]  *** Contents of shared directory: ***
[2024-06-27 23:30:28] insgesamt 565360
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc     17537 27. Jun 21:36 start_atlas.sh
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc    482496 27. Jun 21:36 input.tar.gz
[2024-06-27 23:30:28] -rw-r--r-- 2 boinc boinc 394345519 27. Jun 21:36 ATLAS.root_0
[2024-06-27 23:30:28] -rw------- 1 boinc boinc 183125489 27. Jun 23:29 HITS.pool.root.1
[2024-06-27 23:30:28] -rw------- 1 boinc boinc    942080 27. Jun 23:30 result.tar.gz
23:30:30 (1344926): run_atlas exited; CPU time 36222.091521
23:30:30 (1344926): called boinc_finish(0)

</stderr_txt>
]]>

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