Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
23:30:33 (1402895): wrapper (7.7.26015): starting
23:30:33 (1402895): wrapper: running run_atlas (--nthreads 6)
[2024-06-27 23:30:33] Arguments: --nthreads 6
[2024-06-27 23:30:33] Threads: 6
[2024-06-27 23:30:33] Checking for CVMFS
[2024-06-27 23:30:33] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 23:30:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 23:30:33] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 23:30:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 23:30:33] 2.11.2.0 1110452 488 60432 134362 3 56 3373089 6144001 0 130560 0 972511 99.936 131820 3488 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2024-06-27 23:30:33] CVMFS is ok
[2024-06-27 23:30:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 23:30:33] Checking for apptainer binary...
[2024-06-27 23:30:33] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 23:30:33] Running /usr/bin/apptainer --version
[2024-06-27 23:30:33] apptainer version 1.3.0
[2024-06-27 23:30:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 23:30:33] Ryzen8
[2024-06-27 23:30:33] apptainer works
[2024-06-27 23:30:33] Set ATHENA_PROC_NUMBER=6
[2024-06-27 23:30:33] Set ATHENA_CORE_NUMBER=6
[2024-06-27 23:30:33] Starting ATLAS job with PandaID=6246092025
[2024-06-27 23:30:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 00:56:57]  *** The last 200 lines of the pilot log: ***
[2024-06-28 00:56:57]  ddmendpoint=NDGF-T1_DATADISK
[2024-06-28 00:56:57]  direct_access_lan=False
[2024-06-28 00:56:57]  direct_access_wan=False
[2024-06-28 00:56:57]  domain=
[2024-06-28 00:56:57]  filesize=263716
[2024-06-28 00:56:57]  filetype=log
[2024-06-28 00:56:57]  guid=4d1edf3f-d0e7-43c3-a8f2-5aa3a5530692
[2024-06-28 00:56:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-28 00:56:57]  is_tar=False
[2024-06-28 00:56:57]  lfn=log.40102811._000007.job.log.tgz.1
[2024-06-28 00:56:57]  mtime=0
[2024-06-28 00:56:57]  protocol_id=None
[2024-06-28 00:56:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-28 00:56:57]  replicas=None
[2024-06-28 00:56:57]  scope=mc23_13p6TeV
[2024-06-28 00:56:57]  status=None
[2024-06-28 00:56:57]  status_code=0
[2024-06-28 00:56:57]  storage_token=
[2024-06-28 00:56:57]  surl=/var/lib/boinc2/slots/0/PanDA_Pilot-6246092025/log.40102811._000007.job.log.tgz.1
[2024-06-28 00:56:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/3f/log.40102811._000007.job.log.tgz.1
[2024-06-28 00:56:57]  workdir=None
[2024-06-28 00:56:57] ]
[2024-06-28 00:56:57] 2024-06-27 22:55:14,229 | INFO     | transferring file log.40102811._000007.job.log.tgz.1 from /var/lib/boinc2/slots/0/PanDA_Pilot-6246092025/log.40102811._000007.job.log.tgz.1 to /var/lib/boinc2/slot
[2024-06-28 00:56:57] 2024-06-27 22:55:14,229 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc2/slots/0/PanDA_Pilot-6246092025/log.40102811._000007.job.log.tgz.1 /var/lib/boinc2/slots/0/log.40102811._000007.j
[2024-06-28 00:56:57] 2024-06-27 22:55:14,238 | INFO     | adding to output.list: log.40102811._000007.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/3f/log.40102811._000007.job.log.tg
[2024-06-28 00:56:57] 2024-06-27 22:55:14,238 | INFO     | summary of transferred files:
[2024-06-28 00:56:57] 2024-06-27 22:55:14,238 | INFO     |  -- lfn=log.40102811._000007.job.log.tgz.1, status_code=0, status=transferred
[2024-06-28 00:56:57] 2024-06-27 22:55:14,238 | INFO     | stage-out finished correctly
[2024-06-28 00:56:57] 2024-06-27 22:55:15,329 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-28 00:56:57] 2024-06-27 22:55:17,896 | INFO     | job 6246092025 has state=finished
[2024-06-28 00:56:57] 2024-06-27 22:55:17,896 | INFO     | preparing for final server update for job 6246092025 in state='finished'
[2024-06-28 00:56:57] 2024-06-27 22:55:17,896 | INFO     | this job has now completed (state=finished)
[2024-06-28 00:56:57] 2024-06-27 22:55:17,896 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-28 00:56:57] 2024-06-27 22:55:17,896 | INFO     | job 6246092025 has finished - writing final server update
[2024-06-28 00:56:57] 2024-06-27 22:55:17,897 | INFO     | total number of processed events: 400 (read)
[2024-06-28 00:56:57] 2024-06-27 22:55:17,898 | INFO     | executing command: lscpu
[2024-06-28 00:56:57] 2024-06-27 22:55:17,908 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-06-28 00:56:57] 2024-06-27 22:55:17,908 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-28 00:56:57] 2024-06-27 22:55:17,921 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-28 00:56:57] 2024-06-27 22:56:44,419 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-28 00:56:57] 2024-06-27 22:56:44,422 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6246092025/memory_monitor_summary.json (trf name=prmon)
[2024-06-28 00:56:57] 2024-06-27 22:56:44,423 | INFO     | extracted standard info from prmon json
[2024-06-28 00:56:57] 2024-06-27 22:56:44,423 | INFO     | extracted standard memory fields from prmon json
[2024-06-28 00:56:57] 2024-06-27 22:56:44,423 | WARNING  | GPU info not found in prmon json
[2024-06-28 00:56:57] 2024-06-27 22:56:44,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-28 00:56:57] 2024-06-27 22:56:44,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | fitting pss+swap vs Time
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | model: linear, x: [1719524162.0, 1719524223.0, 1719524284.0, 1719524345.0, 1719524406.0, 1719524467.0, 1719524528.0, 1719524589.0, 1719524650.0, 1719524711.0, 1719
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | sum of square deviations: 136095575.0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | sum of deviations: -15890474471.500004
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | mean x: 1719526449.5
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | mean y: 2642944.513157895
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | -- intersect: 200773984326.10318
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | intersect: 200773984326.10318
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | chi2: 0.11872561959605396
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | -- intersect: 200773984326.10318
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | current memory leak: -116.76 B/s (using 76 data points, chi2=0.12)
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | ..............................
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | . Timing measurements:
[2024-06-28 00:56:57] 2024-06-27 22:56:44,424 | INFO     | . get job = 0 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . initial setup = 1 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . payload setup = 4 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . stage-in = 0 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . payload execution = 5054 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . stage-out = 0 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | . log creation = 0 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,425 | INFO     | ..............................
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | 
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | job summary report
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | --------------------------------------------------
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | PanDA job id: 6246092025
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | task id: 40102811
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | errors: (none)
[2024-06-28 00:56:57] 2024-06-27 22:56:44,465 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 00:56:57] 2024-06-27 22:56:44,467 | INFO     | pilot state: finished 
[2024-06-28 00:56:57] 2024-06-27 22:56:44,467 | INFO     | transexitcode: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,467 | INFO     | exeerrorcode: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,467 | INFO     | exeerrordiag: 
[2024-06-28 00:56:57] 2024-06-27 22:56:44,467 | INFO     | exitcode: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | exitmsg: OK
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | cpuconsumptiontime: 28310 s
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | nevents: 400
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | neventsw: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | pid: 1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | pgrp: 1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | corecount: 6
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | event service: False
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | sizes: {0: 2386846, 1: 2387045, 2: 2387251, 11: 2387279, 5063: 2413649, 5064: 2422611, 5065: 2422795, 5154: 2422965}
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | --------------------------------------------------
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | 
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | WARNING  | process 1413160 is no longer using CPU - aborting
[2024-06-28 00:56:57] 2024-06-27 22:56:44,468 | INFO     | aborting job monitoring since job object (job id=6246092025) has expired
[2024-06-28 00:56:57] 2024-06-27 22:56:44,480 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,480 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,480 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,480 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | job 6246092025 has completed (purged errors)
[2024-06-28 00:56:57] 2024-06-27 22:56:44,481 | INFO     | overall cleanup function is called
[2024-06-28 00:56:57] 2024-06-27 22:56:45,485 | INFO     | --- collectZombieJob: --- 10, [1413160]
[2024-06-28 00:56:57] 2024-06-27 22:56:45,485 | INFO     | zombie collector waiting for pid 1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:45,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 00:56:57] 2024-06-27 22:56:46,488 | INFO     | collected zombie processes
[2024-06-28 00:56:57] 2024-06-27 22:56:46,489 | INFO     | will now attempt to kill all subprocesses of pid=1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:46,528 | INFO     | process IDs to be killed: [1413160] (in reverse order)
[2024-06-28 00:56:57] 2024-06-27 22:56:46,552 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 00:56:57] 2024-06-27 22:56:46,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 00:56:57] 2024-06-27 22:56:46,554 | INFO     | did not find any defunct processes belonging to 1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:46,555 | INFO     | did not find any defunct processes belonging to 1413160
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | ready for new job
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | *************************************
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | *************************************
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | 
[2024-06-28 00:56:57] 2024-06-27 22:56:46,556 | INFO     | architecture information:
[2024-06-28 00:56:57] 2024-06-27 22:56:46,557 | INFO     | executing command: cat /etc/os-release
[2024-06-28 00:56:57] 2024-06-27 22:56:46,563 | INFO     | cat /etc/os-release:
[2024-06-28 00:56:57] NAME="CentOS Linux"
[2024-06-28 00:56:57] VERSION="7 (Core)"
[2024-06-28 00:56:57] ID="centos"
[2024-06-28 00:56:57] ID_LIKE="rhel fedora"
[2024-06-28 00:56:57] VERSION_ID="7"
[2024-06-28 00:56:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 00:56:57] ANSI_COLOR="0;31"
[2024-06-28 00:56:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 00:56:57] HOME_URL="https://www.centos.org/"
[2024-06-28 00:56:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 00:56:57] 
[2024-06-28 00:56:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 00:56:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 00:56:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 00:56:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 00:56:57] 
[2024-06-28 00:56:57] 2024-06-27 22:56:46,563 | INFO     | *************************************
[2024-06-28 00:56:57] 2024-06-27 22:56:47,065 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | INFO     | sufficient remaining disk space (110753742848 B)
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 00:56:57] 2024-06-27 22:56:47,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 00:56:57] 2024-06-27 22:56:47,242 | INFO     | all job control threads have been joined
[2024-06-28 00:56:57] 2024-06-27 22:56:47,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 00:56:57] 2024-06-27 22:56:47,622 | INFO     | all data control threads have been joined
[2024-06-28 00:56:57] 2024-06-27 22:56:47,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 00:56:57] 2024-06-27 22:56:47,973 | INFO     | aborting loop
[2024-06-28 00:56:57] 2024-06-27 22:56:48,074 | INFO     | all payload control threads have been joined
[2024-06-28 00:56:57] 2024-06-27 22:56:48,075 | INFO     | [job] retrieve thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,245 | INFO     | [job] control thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,447 | INFO     | [payload] validate_post thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,473 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,478 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,625 | INFO     | [data] control thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,707 | INFO     | [payload] failed_post thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:48,979 | INFO     | [job] job monitor thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,079 | INFO     | [payload] control thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,345 | INFO     | [data] copytool_out thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,402 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,402 | INFO     | [job] validate thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,459 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:49,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 00:56:57] 2024-06-27 22:56:49,505 | INFO     | [data] copytool_in thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:50,477 | INFO     | [job] queue monitor thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:51,079 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 00:56:57] 2024-06-27 22:56:52,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718212671296)>', '<ExcThread(monitor, started 140717221476096)>']
[2024-06-28 00:56:57] 2024-06-27 22:56:53,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 00:56:57] 2024-06-27 22:56:53,099 | INFO     | [monitor] control thread has ended
[2024-06-28 00:56:57] 2024-06-27 22:56:57,389 | INFO     | all workflow threads have been joined
[2024-06-28 00:56:57] 2024-06-27 22:56:57,389 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 00:56:57] 2024-06-27 22:56:57,389 | INFO     | traces error code: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:57,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 00:56:57] 2024-06-27 22:56:57,436 [wrapper] ==== pilot stdout END ====
[2024-06-28 00:56:57] 2024-06-27 22:56:57,437 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 00:56:57] 2024-06-27 22:56:57,438 [wrapper] pilotpid: 1406598
[2024-06-28 00:56:57] 2024-06-27 22:56:57,438 [wrapper] Pilot exit status: 0
[2024-06-28 00:56:57] 2024-06-27 22:56:57,443 [wrapper] pandaids: 6246092025
[2024-06-28 00:56:57] 2024-06-27 22:56:57,458 [wrapper] cleanup supervisor_pilot 1474221 1406599
[2024-06-28 00:56:57] 2024-06-27 22:56:57,459 [wrapper] Test setup, not cleaning
[2024-06-28 00:56:57] 2024-06-27 22:56:57,460 [wrapper] ==== wrapper stdout END ====
[2024-06-28 00:56:57] 2024-06-27 22:56:57,462 [wrapper] ==== wrapper stderr END ====
[2024-06-28 00:56:57] 2024-06-27 22:56:57,464 [wrapper] apfmon messages muted
[2024-06-28 00:56:57]  *** Error codes and diagnostics ***
[2024-06-28 00:56:57]     "exeErrorCode": 0,
[2024-06-28 00:56:57]     "exeErrorDiag": "",
[2024-06-28 00:56:57]     "pilotErrorCode": 0,
[2024-06-28 00:56:57]     "pilotErrorDiag": "",
[2024-06-28 00:56:57]  *** Listing of results directory ***
[2024-06-28 00:56:57] insgesamt 561968
[2024-06-28 00:56:57] -rwx------ 1 boinc boinc     32220 27. Jun 14:41 runpilot2-wrapper.sh
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc    469766 27. Jun 14:42 pilot3.tar.gz
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc      5654 27. Jun 14:49 queuedata.json
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc       100 27. Jun 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 00:56:57] -rwxr-xr-x 1 boinc boinc      7986 27. Jun 23:30 run_atlas
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc       105 27. Jun 23:30 job.xml
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc     17537 27. Jun 23:30 start_atlas.sh
[2024-06-28 00:56:57] drwxrwx--x 2 boinc boinc      4096 27. Jun 23:30 shared
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc    482495 27. Jun 23:30 input.tar.gz
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc      7159 27. Jun 23:30 init_data.xml
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc 395933089 27. Jun 23:30 EVNT.34668539._000001.pool.root.1
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc         0 27. Jun 23:30 boinc_lockfile
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc      2592 27. Jun 23:30 pandaJob.out
[2024-06-28 00:56:57] -rw------- 1 boinc boinc       461 27. Jun 23:30 setup.sh.local
[2024-06-28 00:56:57] -rw------- 1 boinc boinc   1036868 27. Jun 23:30 agis_schedconf.cvmfs.json
[2024-06-28 00:56:57] -rw------- 1 boinc boinc         0 27. Jun 23:30 agis_ddmendpoints.agis.ALL.json
[2024-06-28 00:56:57] -rw------- 1 boinc boinc   1321378 27. Jun 23:30 cric_ddmendpoints.json
[2024-06-28 00:56:57] drwx------ 4 boinc boinc      4096 27. Jun 23:30 pilot3
[2024-06-28 00:56:57] -rw------- 1 boinc boinc 174489382 28. Jun 00:54 HITS.40102811._000007.pool.root.1
[2024-06-28 00:56:57] -rw------- 1 boinc boinc      1021 28. Jun 00:55 memory_monitor_summary.json
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc       529 28. Jun 00:55 boinc_task_state.xml
[2024-06-28 00:56:57] -rw------- 1 boinc boinc    263716 28. Jun 00:55 log.40102811._000007.job.log.tgz.1
[2024-06-28 00:56:57] -rw------- 1 boinc boinc        95 28. Jun 00:55 pilot_heartbeat.json
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc      8192 28. Jun 00:56 boinc_mmap_file
[2024-06-28 00:56:57] -rw------- 1 boinc boinc      7665 28. Jun 00:56 heartbeat.json
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc        27 28. Jun 00:56 wrapper_checkpoint.txt
[2024-06-28 00:56:57] -rw------- 1 boinc boinc      4336 28. Jun 00:56 pilotlog.txt
[2024-06-28 00:56:57] -rw------- 1 boinc boinc    480013 28. Jun 00:56 log.40102811._000007.job.log.1
[2024-06-28 00:56:57] -rw------- 1 boinc boinc       357 28. Jun 00:56 output.list
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc       620 28. Jun 00:56 runtime_log
[2024-06-28 00:56:57] -rw------- 1 boinc boinc    757760 28. Jun 00:56 result.tar.gz
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc     11349 28. Jun 00:56 runtime_log.err
[2024-06-28 00:56:57] -rw------- 1 boinc boinc       630 28. Jun 00:56 5RzMDmjc3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmb3rKDmtIDNim.diag
[2024-06-28 00:56:57] -rw-r--r-- 1 boinc boinc     20687 28. Jun 00:56 stderr.txt
[2024-06-28 00:56:57] HITS file was successfully produced:
[2024-06-28 00:56:57] -rw------- 1 boinc boinc 174489382 28. Jun 00:54 shared/HITS.pool.root.1
[2024-06-28 00:56:57]  *** Contents of shared directory: ***
[2024-06-28 00:56:57] insgesamt 558296
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc     17537 27. Jun 23:30 start_atlas.sh
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc    482495 27. Jun 23:30 input.tar.gz
[2024-06-28 00:56:57] -rw-r--r-- 2 boinc boinc 395933089 27. Jun 23:30 ATLAS.root_0
[2024-06-28 00:56:57] -rw------- 1 boinc boinc 174489382 28. Jun 00:54 HITS.pool.root.1
[2024-06-28 00:56:57] -rw------- 1 boinc boinc    757760 28. Jun 00:56 result.tar.gz
00:56:58 (1402895): run_atlas exited; CPU time 28294.636884
00:56:58 (1402895): called boinc_finish(0)

</stderr_txt>
]]>

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