Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:17:09 (234994): wrapper (7.7.26015): starting
07:17:09 (234994): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 07:17:09] Arguments: --nthreads 12
[2024-06-27 07:17:09] Threads: 12
[2024-06-27 07:17:09] Checking for CVMFS
[2024-06-27 07:17:09] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 07:17:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 07:17:09] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 07:17:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 07:17:09] 2.10.1.0 13689 1131 93620 134352 2 53 32078147 45568000 6524 130560 0 1918267 99.447 4259889 24441 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 07:17:09] CVMFS is ok
[2024-06-27 07:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 07:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 07:17:09] Further information can be found at the LHC@home message board.
[2024-06-27 07:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 07:17:09] Checking for apptainer binary...
[2024-06-27 07:17:09] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 07:17:09] Running /usr/bin/apptainer --version
[2024-06-27 07:17:10] apptainer version 1.3.2-1.el7
[2024-06-27 07:17:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 07:17:11] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0039.triumf.lcg
[2024-06-27 07:17:11] apptainer works
[2024-06-27 07:17:11] Set ATHENA_PROC_NUMBER=12
[2024-06-27 07:17:11] Set ATHENA_CORE_NUMBER=12
[2024-06-27 07:17:11] Starting ATLAS job with PandaID=6246093547
[2024-06-27 07:17:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 10:15:54]  *** The last 200 lines of the pilot log: ***
[2024-06-27 10:15:54] 2024-06-27 17:15:31,504 | INFO     | chi2: 5.231160246795699
[2024-06-27 10:15:54] 2024-06-27 17:15:31,504 | INFO     | current chi2=5.231160246795699 (change=0.31334648035252827 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,504 | INFO     | right removable region: 169
[2024-06-27 10:15:54] 2024-06-27 17:15:31,504 | INFO     | model: linear, x: [1719498177.0, 1719498238.0, 1719498299.0, 1719498360.0, 1719498421.0, 1719498482.0, 1719498543.0, 1719498604.0, 1719498665.0, 1719498726.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,504 | INFO     | sum of square deviations: 1523872197.5058877
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | sum of deviations: 76055263760.29411
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | mean x: 1719503332.5764706
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | mean y: 2653185.3235294116
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | -- intersect: -85816406779.05574
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | intersect: -85816406779.05574
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | chi2: 2.3860880531349995
[2024-06-27 10:15:54] 2024-06-27 17:15:31,505 | INFO     | current chi2=2.3860880531349995 (change=54.52994712483934 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | model: linear, x: [1719498482.0, 1719498543.0, 1719498604.0, 1719498665.0, 1719498726.0, 1719498787.0, 1719498848.0, 1719498909.0, 1719498970.0, 1719499031.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | sum of square deviations: 1393311604.0363624
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | sum of deviations: 39389774492.890915
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | mean x: 1719503485.1090908
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | mean y: 2696019.006060606
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | -- intersect: -48608723222.72981
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | intersect: -48608723222.72981
[2024-06-27 10:15:54] 2024-06-27 17:15:31,506 | INFO     | chi2: 0.9985769453243892
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | current chi2=0.9985769453243892 (change=58.150037924527 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | model: linear, x: [1719498787.0, 1719498848.0, 1719498909.0, 1719498970.0, 1719499031.0, 1719499092.0, 1719499153.0, 1719499214.0, 1719499276.0, 1719499336.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | sum of square deviations: 1270425572.6937542
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | sum of deviations: 11557430282.481243
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | mean x: 1719503637.64375
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | mean y: 2730387.13125
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | -- intersect: -15640093434.812613
[2024-06-27 10:15:54] 2024-06-27 17:15:31,507 | INFO     | intersect: -15640093434.812613
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | chi2: 0.08097700228556726
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | current chi2=0.08097700228556726 (change=91.89075987937396 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | model: linear, x: [1719499092.0, 1719499153.0, 1719499214.0, 1719499276.0, 1719499336.0, 1719499397.0, 1719499460.0, 1719499519.0, 1719499580.0, 1719499641.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | sum of square deviations: 1154981540.9419365
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | sum of deviations: 4910284688.987095
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | mean x: 1719503790.1806452
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | mean y: 2739057.929032258
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | -- intersect: -7307553647.436172
[2024-06-27 10:15:54] 2024-06-27 17:15:31,508 | INFO     | intersect: -7307553647.436172
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | chi2: 0.005159950824385612
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | current chi2=0.005159950824385612 (change=93.62788115298596 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | model: linear, x: [1719499397.0, 1719499460.0, 1719499519.0, 1719499580.0, 1719499641.0, 1719499702.0, 1719499763.0, 1719499824.0, 1719499887.0, 1719499946.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | sum of square deviations: 1046756280.6733334
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | sum of deviations: 3877295731.280002
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | mean x: 1719503942.7133334
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | mean y: 2740506.96
[2024-06-27 10:15:54] 2024-06-27 17:15:31,509 | INFO     | -- intersect: -6366483561.810745
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | intersect: -6366483561.810745
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | chi2: 0.004612652790075495
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | current chi2=0.004612652790075495 (change=10.60665213559052 %)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | left removable region: 50
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | model: linear, x: [1719500922.0, 1719500983.0, 1719501044.0, 1719501105.0, 1719501167.0, 1719501227.0, 1719501288.0, 1719501349.0, 1719501410.0, 1719501471.0, 1719
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | sum of square deviations: 522638275.57983124
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | sum of deviations: 649762497.7478993
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | mean x: 1719504522.462185
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | mean y: 2746502.277310924
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | -- intersect: -2135002693.6925101
[2024-06-27 10:15:54] 2024-06-27 17:15:31,510 | INFO     | intersect: -2135002693.6925101
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | chi2: 0.0027367245125055357
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | -- intersect: -2135002693.6925101
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | current memory leak: 1.24 B/s (using 119 data points, chi2=0.00)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | ..............................
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . Timing measurements:
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . get job = 0 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . initial setup = 2 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . payload setup = 5 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . stage-in = 0 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . payload execution = 10652 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . stage-out = 0 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | . log creation = 0 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,511 | INFO     | ..............................
[2024-06-27 10:15:54] 2024-06-27 17:15:31,570 | INFO     | 
[2024-06-27 10:15:54] 2024-06-27 17:15:31,570 | INFO     | job summary report
[2024-06-27 10:15:54] 2024-06-27 17:15:31,570 | INFO     | --------------------------------------------------
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | PanDA job id: 6246093547
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | task id: 40102868
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | errors: (none)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | pilot state: finished 
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | transexitcode: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | exeerrorcode: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | exeerrordiag: 
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | exitcode: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | exitmsg: OK
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | cpuconsumptiontime: 53169 s
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | nevents: 400
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | neventsw: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | pid: 245112
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | pgrp: 245112
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | corecount: 12
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | event service: False
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | sizes: {0: 2387002, 6: 2387208, 11: 2387236, 10662: 2415956, 10664: 2424910, 10667: 2424966, 10673: 2425264}
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | --------------------------------------------------
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | 
[2024-06-27 10:15:54] 2024-06-27 17:15:31,571 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | job 6246093547 has completed (purged errors)
[2024-06-27 10:15:54] 2024-06-27 17:15:31,588 | INFO     | overall cleanup function is called
[2024-06-27 10:15:54] 2024-06-27 17:15:32,595 | INFO     | --- collectZombieJob: --- 10, [245112]
[2024-06-27 10:15:54] 2024-06-27 17:15:32,595 | INFO     | zombie collector waiting for pid 245112
[2024-06-27 10:15:54] 2024-06-27 17:15:32,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 10:15:54] 2024-06-27 17:15:33,599 | INFO     | collected zombie processes
[2024-06-27 10:15:54] 2024-06-27 17:15:33,600 | INFO     | will now attempt to kill all subprocesses of pid=245112
[2024-06-27 10:15:54] 2024-06-27 17:15:33,718 | INFO     | process IDs to be killed: [245112] (in reverse order)
[2024-06-27 10:15:54] 2024-06-27 17:15:33,788 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 10:15:54] 2024-06-27 17:15:33,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 10:15:54] 2024-06-27 17:15:33,798 | INFO     | did not find any defunct processes belonging to 245112
[2024-06-27 10:15:54] 2024-06-27 17:15:33,805 | INFO     | did not find any defunct processes belonging to 245112
[2024-06-27 10:15:54] 2024-06-27 17:15:33,806 | INFO     | ready for new job
[2024-06-27 10:15:54] 2024-06-27 17:15:33,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 10:15:54] 2024-06-27 17:15:33,809 | INFO     | *************************************
[2024-06-27 10:15:54] 2024-06-27 17:15:33,810 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 10:15:54] 2024-06-27 17:15:33,810 | INFO     | *************************************
[2024-06-27 10:15:54] 2024-06-27 17:15:33,810 | INFO     | 
[2024-06-27 10:15:54] 2024-06-27 17:15:33,815 | INFO     | architecture information:
[2024-06-27 10:15:54] 2024-06-27 17:15:33,815 | INFO     | executing command: cat /etc/os-release
[2024-06-27 10:15:54] 2024-06-27 17:15:33,835 | INFO     | cat /etc/os-release:
[2024-06-27 10:15:54] NAME="CentOS Linux"
[2024-06-27 10:15:54] VERSION="7 (Core)"
[2024-06-27 10:15:54] ID="centos"
[2024-06-27 10:15:54] ID_LIKE="rhel fedora"
[2024-06-27 10:15:54] VERSION_ID="7"
[2024-06-27 10:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 10:15:54] ANSI_COLOR="0;31"
[2024-06-27 10:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 10:15:54] HOME_URL="https://www.centos.org/"
[2024-06-27 10:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 10:15:54] 
[2024-06-27 10:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 10:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 10:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 10:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 10:15:54] 
[2024-06-27 10:15:54] 2024-06-27 17:15:33,836 | INFO     | *************************************
[2024-06-27 10:15:54] 2024-06-27 17:15:34,339 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 10:15:54] 2024-06-27 17:15:34,356 | INFO     | sufficient remaining disk space (2089546678272 B)
[2024-06-27 10:15:54] 2024-06-27 17:15:34,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 10:15:54] 2024-06-27 17:15:34,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 10:15:54] 2024-06-27 17:15:34,394 | INFO     | all job control threads have been joined
[2024-06-27 10:15:54] 2024-06-27 17:15:34,524 | INFO     | all data control threads have been joined
[2024-06-27 10:15:54] 2024-06-27 17:15:34,912 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 10:15:54] 2024-06-27 17:15:34,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 10:15:54] 2024-06-27 17:15:34,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 10:15:54] 2024-06-27 17:15:35,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:15:54] 2024-06-27 17:15:35,062 | INFO     | aborting loop
[2024-06-27 10:15:54] 2024-06-27 17:15:35,362 | INFO     | [job] retrieve thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:35,395 | INFO     | [job] control thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:35,425 | INFO     | [payload] failed_post thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:35,486 | INFO     | all payload control threads have been joined
[2024-06-27 10:15:54] 2024-06-27 17:15:35,529 | INFO     | [data] control thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:35,548 | INFO     | [job] validate thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:35,603 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 10:15:54] 2024-06-27 17:15:35,746 | INFO     | [payload] validate_post thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,067 | INFO     | [job] job monitor thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,131 | INFO     | [data] copytool_in thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,165 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 10:15:54] 2024-06-27 17:15:36,179 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,255 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,274 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,491 | INFO     | [payload] control thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:36,576 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:15:54] 2024-06-27 17:15:37,576 | INFO     | [job] queue monitor thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:37,609 | INFO     | [data] copytool_out thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:40,170 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:44,916 | INFO     | job.realtimelogging is not enabled
[2024-06-27 10:15:54] 2024-06-27 17:15:45,922 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 10:15:54] 2024-06-27 17:15:46,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139945420171072)>', '<ExcThread(monitor, started 139944982992640)>']
[2024-06-27 10:15:54] 2024-06-27 17:15:46,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 10:15:54] 2024-06-27 17:15:46,966 | INFO     | [monitor] control thread has ended
[2024-06-27 10:15:54] 2024-06-27 17:15:51,577 | INFO     | all workflow threads have been joined
[2024-06-27 10:15:54] 2024-06-27 17:15:51,577 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 10:15:54] 2024-06-27 17:15:51,615 | INFO     | traces error code: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:51,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 10:15:54] 2024-06-27 17:15:52,872 [wrapper] ==== pilot stdout END ====
[2024-06-27 10:15:54] 2024-06-27 17:15:53,098 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 10:15:54] 2024-06-27 17:15:53,333 [wrapper] pilotpid: 238714
[2024-06-27 10:15:54] 2024-06-27 17:15:53,547 [wrapper] Pilot exit status: 0
[2024-06-27 10:15:54] 2024-06-27 17:15:54,031 [wrapper] pandaids: 6246093547
[2024-06-27 10:15:54] 2024-06-27 17:15:54,071 [wrapper] cleanup supervisor_pilot 196921 238715
[2024-06-27 10:15:54] 2024-06-27 17:15:54,073 [wrapper] Test setup, not cleaning
[2024-06-27 10:15:54] 2024-06-27 17:15:54,111 [wrapper] ==== wrapper stdout END ====
[2024-06-27 10:15:54] 2024-06-27 17:15:54,113 [wrapper] ==== wrapper stderr END ====
[2024-06-27 10:15:54] 2024-06-27 17:15:54,120 [wrapper] apfmon messages muted
[2024-06-27 10:15:54]  *** Error codes and diagnostics ***
[2024-06-27 10:15:54]     "exeErrorCode": 0,
[2024-06-27 10:15:54]     "exeErrorDiag": "",
[2024-06-27 10:15:54]     "pilotErrorCode": 0,
[2024-06-27 10:15:54]     "pilotErrorDiag": "",
[2024-06-27 10:15:54]  *** Listing of results directory ***
[2024-06-27 10:15:54] total 567652
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 10:15:54] -rwx------ 1 boinc boinc     32220 Jun 27 05:52 runpilot2-wrapper.sh
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:53 queuedata.json
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc       100 Jun 27 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 10:15:54] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 07:17 run_atlas
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc       105 Jun 27 07:17 job.xml
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc      6626 Jun 27 07:17 init_data.xml
[2024-06-27 10:15:54] -rw-r--r-- 2 boinc boinc 392204742 Jun 27 07:17 EVNT.34668864._000002.pool.root.1
[2024-06-27 10:15:54] -rw-r--r-- 2 boinc boinc     17537 Jun 27 07:17 start_atlas.sh
[2024-06-27 10:15:54] drwxrwx--x 2 boinc boinc      4096 Jun 27 07:17 shared
[2024-06-27 10:15:54] -rw-r--r-- 2 boinc boinc    482506 Jun 27 07:17 input.tar.gz
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc         0 Jun 27 07:17 boinc_lockfile
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc      2593 Jun 27 07:17 pandaJob.out
[2024-06-27 10:15:54] -rw------- 1 boinc boinc       424 Jun 27 07:17 setup.sh.local
[2024-06-27 10:15:54] -rw------- 1 boinc boinc   1034827 Jun 27 07:17 agis_schedconf.cvmfs.json
[2024-06-27 10:15:54] -rw------- 1 boinc boinc         0 Jun 27 07:17 agis_ddmendpoints.agis.ALL.json
[2024-06-27 10:15:54] -rw------- 1 boinc boinc   1321363 Jun 27 07:17 cric_ddmendpoints.json
[2024-06-27 10:15:54] drwx------ 4 boinc boinc      4096 Jun 27 07:17 pilot3
[2024-06-27 10:15:54] -rw------- 1 boinc boinc 182840042 Jun 27 10:14 HITS.40102868._000031.pool.root.1
[2024-06-27 10:15:54] -rw------- 1 boinc boinc        95 Jun 27 10:14 pilot_heartbeat.json
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc       530 Jun 27 10:15 boinc_task_state.xml
[2024-06-27 10:15:54] -rw------- 1 boinc boinc      1068 Jun 27 10:15 memory_monitor_summary.json
[2024-06-27 10:15:54] -rw------- 1 boinc boinc    408082 Jun 27 10:15 log.40102868._000031.job.log.tgz.1
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc      8192 Jun 27 10:15 boinc_mmap_file
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc        27 Jun 27 10:15 wrapper_checkpoint.txt
[2024-06-27 10:15:54] -rw------- 1 boinc boinc      7780 Jun 27 10:15 heartbeat.json
[2024-06-27 10:15:54] -rw------- 1 boinc boinc      4282 Jun 27 10:15 pilotlog.txt
[2024-06-27 10:15:54] -rw------- 1 boinc boinc    933874 Jun 27 10:15 log.40102868._000031.job.log.1
[2024-06-27 10:15:54] -rw------- 1 boinc boinc       357 Jun 27 10:15 output.list
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc       620 Jun 27 10:15 runtime_log
[2024-06-27 10:15:54] -rw------- 1 boinc boinc   1361920 Jun 27 10:15 result.tar.gz
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc     11287 Jun 27 10:15 runtime_log.err
[2024-06-27 10:15:54] -rw------- 1 boinc boinc       657 Jun 27 10:15 ih0NDman3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmX3oKDmG9seFo.diag
[2024-06-27 10:15:54] -rw-r--r-- 1 boinc boinc     21907 Jun 27 10:15 stderr.txt
[2024-06-27 10:15:55] HITS file was successfully produced:
[2024-06-27 10:15:55] -rw------- 1 boinc boinc 182840042 Jun 27 10:14 shared/HITS.pool.root.1
[2024-06-27 10:15:55]  *** Contents of shared directory: ***
[2024-06-27 10:15:55] total 563404
[2024-06-27 10:15:55] -rw-r--r-- 2 boinc boinc 392204742 Jun 27 07:17 ATLAS.root_0
[2024-06-27 10:15:55] -rw-r--r-- 2 boinc boinc     17537 Jun 27 07:17 start_atlas.sh
[2024-06-27 10:15:55] -rw-r--r-- 2 boinc boinc    482506 Jun 27 07:17 input.tar.gz
[2024-06-27 10:15:55] -rw------- 1 boinc boinc 182840042 Jun 27 10:14 HITS.pool.root.1
[2024-06-27 10:15:55] -rw------- 1 boinc boinc   1361920 Jun 27 10:15 result.tar.gz
10:15:57 (234994): run_atlas exited; CPU time 52933.648768
10:15:57 (234994): called boinc_finish(0)

</stderr_txt>
]]>

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