Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:35:18 (759649): wrapper (7.7.26015): starting
22:35:18 (759649): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 22:35:18] Arguments: --nthreads 4
[2024-06-27 22:35:18] Threads: 4
[2024-06-27 22:35:18] Checking for CVMFS
[2024-06-27 22:35:18] No cvmfs_config command found, will try listing directly
[2024-06-27 22:35:18] CVMFS is ok
[2024-06-27 22:35:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 22:35:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 22:35:18] Further information can be found at the LHC@home message board.
[2024-06-27 22:35:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 22:35:18] Checking for apptainer binary...
[2024-06-27 22:35:18] which: no apptainer in ((null))
[2024-06-27 22:35:18] apptainer is not installed, using version from CVMFS
[2024-06-27 22:35:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 22:35:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-27 22:35:19] apptainer works
[2024-06-27 22:35:19] Set ATHENA_PROC_NUMBER=4
[2024-06-27 22:35:19] Set ATHENA_CORE_NUMBER=4
[2024-06-27 22:35:19] Starting ATLAS job with PandaID=6246091290
[2024-06-27 22:35:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 02:53:34]  *** The last 200 lines of the pilot log: ***
[2024-06-28 02:53:34] 2024-06-28 00:53:20,119 | WARNING  | GPU info not found in prmon json
[2024-06-28 02:53:34] 2024-06-28 00:53:20,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-28 02:53:34] 2024-06-28 00:53:20,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-28 02:53:34] 2024-06-28 00:53:20,122 | INFO     | fitting pss+swap vs Time
[2024-06-28 02:53:34] 2024-06-28 00:53:20,123 | INFO     | model: linear, x: [1719520548.0, 1719520609.0, 1719520670.0, 1719520731.0, 1719520792.0, 1719520853.0, 1719520914.0, 1719520975.0, 1719521036.0, 1719521097.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,123 | INFO     | sum of square deviations: 5081276667.5
[2024-06-28 02:53:34] 2024-06-28 00:53:20,124 | INFO     | sum of deviations: 101082741259.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,124 | INFO     | mean x: 1719528264.5
[2024-06-28 02:53:34] 2024-06-28 00:53:20,124 | INFO     | mean y: 2268407.125984252
[2024-06-28 02:53:34] 2024-06-28 00:53:20,124 | INFO     | -- intersect: -34204613449.891266
[2024-06-28 02:53:34] 2024-06-28 00:53:20,124 | INFO     | intersect: -34204613449.891266
[2024-06-28 02:53:34] 2024-06-28 00:53:20,125 | INFO     | chi2: 4.322871506335608
[2024-06-28 02:53:34] 2024-06-28 00:53:20,125 | INFO     | model: linear, x: [1719520548.0, 1719520609.0, 1719520670.0, 1719520731.0, 1719520792.0, 1719520853.0, 1719520914.0, 1719520975.0, 1719521036.0, 1719521097.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,125 | INFO     | sum of square deviations: 4787066500.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,126 | INFO     | sum of deviations: 114118505735.99998
[2024-06-28 02:53:34] 2024-06-28 00:53:20,126 | INFO     | mean x: 1719528112.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,126 | INFO     | mean y: 2275034.558232932
[2024-06-28 02:53:34] 2024-06-28 00:53:20,126 | INFO     | -- intersect: -40989421803.6798
[2024-06-28 02:53:34] 2024-06-28 00:53:20,126 | INFO     | intersect: -40989421803.6798
[2024-06-28 02:53:34] 2024-06-28 00:53:20,127 | INFO     | chi2: 3.5696029341238376
[2024-06-28 02:53:34] 2024-06-28 00:53:20,127 | INFO     | current chi2=3.5696029341238376 (change=17.425189971706974 %)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,127 | INFO     | right removable region: 248
[2024-06-28 02:53:34] 2024-06-28 00:53:20,127 | INFO     | model: linear, x: [1719520853.0, 1719520914.0, 1719520975.0, 1719521036.0, 1719521097.0, 1719521158.0, 1719521219.0, 1719521280.0, 1719521341.0, 1719521402.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,127 | INFO     | sum of square deviations: 4787066500.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,128 | INFO     | sum of deviations: 48999714305.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,128 | INFO     | mean x: 1719528417.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,128 | INFO     | mean y: 2295321.012048193
[2024-06-28 02:53:34] 2024-06-28 00:53:20,128 | INFO     | -- intersect: -17598546692.009686
[2024-06-28 02:53:34] 2024-06-28 00:53:20,128 | INFO     | intersect: -17598546692.009686
[2024-06-28 02:53:34] 2024-06-28 00:53:20,129 | INFO     | chi2: 2.2924356464994093
[2024-06-28 02:53:34] 2024-06-28 00:53:20,129 | INFO     | current chi2=2.2924356464994093 (change=46.969609364062485 %)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,129 | INFO     | model: linear, x: [1719521158.0, 1719521219.0, 1719521280.0, 1719521341.0, 1719521402.0, 1719521463.0, 1719521524.0, 1719521585.0, 1719521646.0, 1719521707.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,129 | INFO     | sum of square deviations: 4504437945.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,130 | INFO     | sum of deviations: 2493786170.500025
[2024-06-28 02:53:34] 2024-06-28 00:53:20,130 | INFO     | mean x: 1719528569.5
[2024-06-28 02:53:34] 2024-06-28 00:53:20,130 | INFO     | mean y: 2320432.9221311477
[2024-06-28 02:53:34] 2024-06-28 00:53:20,130 | INFO     | -- intersect: -949659951.4804763
[2024-06-28 02:53:34] 2024-06-28 00:53:20,130 | INFO     | intersect: -949659951.4804763
[2024-06-28 02:53:34] 2024-06-28 00:53:20,131 | INFO     | chi2: 0.8598099694006278
[2024-06-28 02:53:34] 2024-06-28 00:53:20,131 | INFO     | current chi2=0.8598099694006278 (change=62.49360496930096 %)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,131 | INFO     | model: linear, x: [1719521463.0, 1719521524.0, 1719521585.0, 1719521646.0, 1719521707.0, 1719521768.0, 1719521829.0, 1719521890.0, 1719521951.0, 1719522012.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,131 | INFO     | sum of square deviations: 4233158440.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,132 | INFO     | sum of deviations: -5348412656.000006
[2024-06-28 02:53:34] 2024-06-28 00:53:20,132 | INFO     | mean x: 1719528722.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,132 | INFO     | mean y: 2324794.1841004184
[2024-06-28 02:53:34] 2024-06-28 00:53:20,132 | INFO     | -- intersect: 2174874985.596335
[2024-06-28 02:53:34] 2024-06-28 00:53:20,132 | INFO     | intersect: 2174874985.596335
[2024-06-28 02:53:34] 2024-06-28 00:53:20,133 | INFO     | chi2: 0.7819136722625719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,133 | INFO     | current chi2=0.7819136722625719 (change=9.059710855918231 %)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,133 | INFO     | left removable region: 30
[2024-06-28 02:53:34] 2024-06-28 00:53:20,133 | INFO     | model: linear, x: [1719522378.0, 1719522439.0, 1719522500.0, 1719522561.0, 1719522622.0, 1719522683.0, 1719522744.0, 1719522805.0, 1719522866.0, 1719522927.0, 1719
[2024-06-28 02:53:34] 2024-06-28 00:53:20,133 | INFO     | sum of square deviations: 3212467674.5
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | sum of deviations: 8289685341.0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | mean x: 1719528996.5
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | mean y: 2333351.376146789
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | -- intersect: -4434864391.922263
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | intersect: -4434864391.922263
[2024-06-28 02:53:34] 2024-06-28 00:53:20,134 | INFO     | chi2: 0.0015639081932418348
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | -- intersect: -4434864391.922263
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | current memory leak: 2.58 B/s (using 218 data points, chi2=0.00)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | ..............................
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . Timing measurements:
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . get job = 0 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . initial setup = 1 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . payload setup = 3 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . stage-in = 0 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . payload execution = 15448 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . stage-out = 0 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,135 | INFO     | . log creation = 0 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,136 | INFO     | ..............................
[2024-06-28 02:53:34] 2024-06-28 00:53:20,194 | INFO     | 
[2024-06-28 02:53:34] 2024-06-28 00:53:20,194 | INFO     | job summary report
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | --------------------------------------------------
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | PanDA job id: 6246091290
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | task id: 40102783
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | errors: (none)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | pilot state: finished 
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | transexitcode: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | exeerrorcode: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | exeerrordiag: 
[2024-06-28 02:53:34] 2024-06-28 00:53:20,195 | INFO     | exitcode: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | exitmsg: OK
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | cpuconsumptiontime: 58679 s
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | nevents: 400
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | neventsw: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | pid: 770285
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | pgrp: 770285
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | corecount: 4
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | event service: False
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | sizes: {0: 2387040, 3: 2387246, 11: 2387274, 15456: 2418722, 15458: 2427760, 15460: 2427874}
[2024-06-28 02:53:34] 2024-06-28 00:53:20,196 | INFO     | --------------------------------------------------
[2024-06-28 02:53:34] 2024-06-28 00:53:20,197 | INFO     | 
[2024-06-28 02:53:34] 2024-06-28 00:53:20,197 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/1
[2024-06-28 02:53:34] 2024-06-28 00:53:20,213 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,213 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,213 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,213 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,214 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 02:53:34] 2024-06-28 00:53:20,215 | INFO     | job 6246091290 has completed (purged errors)
[2024-06-28 02:53:34] 2024-06-28 00:53:20,216 | INFO     | overall cleanup function is called
[2024-06-28 02:53:34] 2024-06-28 00:53:21,222 | INFO     | --- collectZombieJob: --- 10, [770285]
[2024-06-28 02:53:34] 2024-06-28 00:53:21,222 | INFO     | zombie collector waiting for pid 770285
[2024-06-28 02:53:34] 2024-06-28 00:53:21,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 02:53:34] 2024-06-28 00:53:22,227 | INFO     | collected zombie processes
[2024-06-28 02:53:34] 2024-06-28 00:53:22,227 | INFO     | will now attempt to kill all subprocesses of pid=770285
[2024-06-28 02:53:34] 2024-06-28 00:53:22,304 | INFO     | process IDs to be killed: [770285] (in reverse order)
[2024-06-28 02:53:34] 2024-06-28 00:53:22,358 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 02:53:34] 2024-06-28 00:53:22,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 02:53:34] 2024-06-28 00:53:22,361 | INFO     | did not find any defunct processes belonging to 770285
[2024-06-28 02:53:34] 2024-06-28 00:53:22,364 | INFO     | did not find any defunct processes belonging to 770285
[2024-06-28 02:53:34] 2024-06-28 00:53:22,364 | INFO     | ready for new job
[2024-06-28 02:53:34] 2024-06-28 00:53:22,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 02:53:34] 2024-06-28 00:53:22,365 | INFO     | *************************************
[2024-06-28 02:53:34] 2024-06-28 00:53:22,365 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 02:53:34] 2024-06-28 00:53:22,365 | INFO     | *************************************
[2024-06-28 02:53:34] 2024-06-28 00:53:22,366 | INFO     | 
[2024-06-28 02:53:34] 2024-06-28 00:53:22,367 | INFO     | architecture information:
[2024-06-28 02:53:34] 2024-06-28 00:53:22,367 | INFO     | executing command: cat /etc/os-release
[2024-06-28 02:53:34] 2024-06-28 00:53:22,378 | INFO     | cat /etc/os-release:
[2024-06-28 02:53:34] NAME="CentOS Linux"
[2024-06-28 02:53:34] VERSION="7 (Core)"
[2024-06-28 02:53:34] ID="centos"
[2024-06-28 02:53:34] ID_LIKE="rhel fedora"
[2024-06-28 02:53:34] VERSION_ID="7"
[2024-06-28 02:53:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 02:53:34] ANSI_COLOR="0;31"
[2024-06-28 02:53:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 02:53:34] HOME_URL="https://www.centos.org/"
[2024-06-28 02:53:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 02:53:34] 
[2024-06-28 02:53:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 02:53:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 02:53:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 02:53:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 02:53:34] 
[2024-06-28 02:53:34] 2024-06-28 00:53:22,378 | INFO     | *************************************
[2024-06-28 02:53:34] 2024-06-28 00:53:22,881 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/1
[2024-06-28 02:53:34] 2024-06-28 00:53:22,896 | INFO     | sufficient remaining disk space (1687673634816 B)
[2024-06-28 02:53:34] 2024-06-28 00:53:22,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 02:53:34] 2024-06-28 00:53:22,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 02:53:34] 2024-06-28 00:53:22,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 02:53:34] 2024-06-28 00:53:22,898 | INFO     | aborting loop
[2024-06-28 02:53:34] 2024-06-28 00:53:22,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 02:53:34] 2024-06-28 00:53:23,306 | INFO     | all data control threads have been joined
[2024-06-28 02:53:34] 2024-06-28 00:53:23,461 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 02:53:34] 2024-06-28 00:53:23,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 02:53:34] 2024-06-28 00:53:23,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 02:53:34] 2024-06-28 00:53:23,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 02:53:34] 2024-06-28 00:53:23,902 | INFO     | [job] retrieve thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:23,903 | INFO     | [job] job monitor thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:23,923 | INFO     | [payload] failed_post thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:23,970 | INFO     | all job control threads have been joined
[2024-06-28 02:53:34] 2024-06-28 00:53:24,149 | INFO     | all payload control threads have been joined
[2024-06-28 02:53:34] 2024-06-28 00:53:24,310 | INFO     | [data] control thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:24,495 | INFO     | [payload] validate_post thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:24,843 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:24,866 | INFO     | [job] validate thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:24,967 | INFO     | [data] copytool_out thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:24,976 | INFO     | [job] control thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:25,087 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:25,155 | INFO     | [payload] control thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:25,204 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 02:53:34] 2024-06-28 00:53:25,283 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:25,286 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:25,325 | INFO     | [data] copytool_in thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:26,209 | INFO     | [job] queue monitor thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:27,527 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 02:53:34] 2024-06-28 00:53:28,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47102912980032)>', '<ExcThread(monitor, started 47103095355136)>']
[2024-06-28 02:53:34] 2024-06-28 00:53:28,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 02:53:34] 2024-06-28 00:53:28,484 | INFO     | [monitor] control thread has ended
[2024-06-28 02:53:34] 2024-06-28 00:53:33,312 | INFO     | all workflow threads have been joined
[2024-06-28 02:53:34] 2024-06-28 00:53:33,313 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 02:53:34] 2024-06-28 00:53:33,313 | INFO     | traces error code: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:33,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 02:53:34] 2024-06-28 00:53:33,400 [wrapper] ==== pilot stdout END ====
[2024-06-28 02:53:34] 2024-06-28 00:53:33,402 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 02:53:34] 2024-06-28 00:53:33,404 [wrapper] pilotpid: 763286
[2024-06-28 02:53:34] 2024-06-28 00:53:33,405 [wrapper] Pilot exit status: 0
[2024-06-28 02:53:34] 2024-06-28 00:53:33,412 [wrapper] pandaids: 6246091290
[2024-06-28 02:53:34] 2024-06-28 00:53:33,452 [wrapper] cleanup supervisor_pilot 1104493 763287
[2024-06-28 02:53:34] 2024-06-28 00:53:33,454 [wrapper] Test setup, not cleaning
[2024-06-28 02:53:34] 2024-06-28 00:53:33,455 [wrapper] ==== wrapper stdout END ====
[2024-06-28 02:53:34] 2024-06-28 00:53:33,457 [wrapper] ==== wrapper stderr END ====
[2024-06-28 02:53:34] 2024-06-28 00:53:33,460 [wrapper] apfmon messages muted
[2024-06-28 02:53:34]  *** Error codes and diagnostics ***
[2024-06-28 02:53:34]     "exeErrorCode": 0,
[2024-06-28 02:53:34]     "exeErrorDiag": "",
[2024-06-28 02:53:34]     "pilotErrorCode": 0,
[2024-06-28 02:53:34]     "pilotErrorDiag": "",
[2024-06-28 02:53:34]  *** Listing of results directory ***
[2024-06-28 02:53:34] total 566992
[2024-06-28 02:53:34] -rwx------ 1 boinc boinc     32220 Jun 27 14:41 runpilot2-wrapper.sh
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:42 pilot3.tar.gz
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:49 queuedata.json
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc       100 Jun 27 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 02:53:34] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 22:35 run_atlas
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc       105 Jun 27 22:35 job.xml
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc      6456 Jun 27 22:35 init_data.xml
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc 397289450 Jun 27 22:35 EVNT.34668311._000001.pool.root.1
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 22:35 start_atlas.sh
[2024-06-28 02:53:34] drwxrwx--x 2 boinc boinc      4096 Jun 27 22:35 shared
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc    482499 Jun 27 22:35 input.tar.gz
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc         0 Jun 27 22:35 boinc_lockfile
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc      2605 Jun 27 22:35 pandaJob.out
[2024-06-28 02:53:34] -rw------- 1 boinc boinc       424 Jun 27 22:35 setup.sh.local
[2024-06-28 02:53:34] -rw------- 1 boinc boinc   1036876 Jun 27 22:35 agis_schedconf.cvmfs.json
[2024-06-28 02:53:34] -rw------- 1 boinc boinc   1321378 Jun 27 22:35 cric_ddmendpoints.json
[2024-06-28 02:53:34] drwx------ 4 boinc boinc      4096 Jun 27 22:35 pilot3
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc       531 Jun 28 02:52 boinc_task_state.xml
[2024-06-28 02:53:34] -rw------- 1 boinc boinc 175867082 Jun 28 02:52 HITS.40102783._000004.pool.root.1
[2024-06-28 02:53:34] -rw------- 1 boinc boinc        95 Jun 28 02:53 pilot_heartbeat.json
[2024-06-28 02:53:34] -rw------- 1 boinc boinc      1040 Jun 28 02:53 memory_monitor_summary.json
[2024-06-28 02:53:34] -rw------- 1 boinc boinc         0 Jun 28 02:53 agis_ddmendpoints.agis.ALL.json
[2024-06-28 02:53:34] -rw------- 1 boinc boinc    340301 Jun 28 02:53 log.40102783._000004.job.log.tgz.1
[2024-06-28 02:53:34] -rw------- 1 boinc boinc      7750 Jun 28 02:53 heartbeat.json
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc        28 Jun 28 02:53 wrapper_checkpoint.txt
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc      8192 Jun 28 02:53 boinc_mmap_file
[2024-06-28 02:53:34] -rw------- 1 boinc boinc      4222 Jun 28 02:53 pilotlog.txt
[2024-06-28 02:53:34] -rw------- 1 boinc boinc   1603597 Jun 28 02:53 log.40102783._000004.job.log.1
[2024-06-28 02:53:34] -rw------- 1 boinc boinc       357 Jun 28 02:53 output.list
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc       620 Jun 28 02:53 runtime_log
[2024-06-28 02:53:34] -rw------- 1 boinc boinc   1966080 Jun 28 02:53 result.tar.gz
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc     11410 Jun 28 02:53 runtime_log.err
[2024-06-28 02:53:34] -rw------- 1 boinc boinc       658 Jun 28 02:53 MuHNDmTc3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmt1rKDmHEmTDm.diag
[2024-06-28 02:53:34] -rw-r--r-- 1 boinc boinc     21238 Jun 28 02:53 stderr.txt
[2024-06-28 02:53:34] HITS file was successfully produced:
[2024-06-28 02:53:34] -rw------- 1 boinc boinc 175867082 Jun 28 02:52 shared/HITS.pool.root.1
[2024-06-28 02:53:34]  *** Contents of shared directory: ***
[2024-06-28 02:53:34] total 562148
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc 397289450 Jun 27 22:35 ATLAS.root_0
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 22:35 start_atlas.sh
[2024-06-28 02:53:34] -rw-r--r-- 2 boinc boinc    482499 Jun 27 22:35 input.tar.gz
[2024-06-28 02:53:34] -rw------- 1 boinc boinc 175867082 Jun 28 02:52 HITS.pool.root.1
[2024-06-28 02:53:34] -rw------- 1 boinc boinc   1966080 Jun 28 02:53 result.tar.gz
02:53:35 (759649): run_atlas exited; CPU time 58513.795095
02:53:35 (759649): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN