Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:05:53 (170734): wrapper (7.7.26015): starting
16:05:53 (170734): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 16:05:53] Arguments: --nthreads 4
[2024-06-27 16:05:53] Threads: 4
[2024-06-27 16:05:53] Checking for CVMFS
[2024-06-27 16:05:53] No cvmfs_config command found, will try listing directly
[2024-06-27 16:05:53] CVMFS is ok
[2024-06-27 16:05:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 16:05:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 16:05:53] Further information can be found at the LHC@home message board.
[2024-06-27 16:05:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 16:05:53] Checking for apptainer binary...
[2024-06-27 16:05:53] which: no apptainer in ((null))
[2024-06-27 16:05:53] apptainer is not installed, using version from CVMFS
[2024-06-27 16:05:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 16:05:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-27 16:05:54] apptainer works
[2024-06-27 16:05:54] Set ATHENA_PROC_NUMBER=4
[2024-06-27 16:05:54] Set ATHENA_CORE_NUMBER=4
[2024-06-27 16:05:54] Starting ATLAS job with PandaID=6246093675
[2024-06-27 16:05:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:13:25 (330343): wrapper (7.7.26015): starting
17:13:25 (330343): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 17:13:25] Arguments: --nthreads 4
[2024-06-27 17:13:25] Threads: 4
[2024-06-27 17:13:25] This job has been restarted, cleaning up previous attempt
[2024-06-27 17:13:25] Checking for CVMFS
[2024-06-27 17:13:25] No cvmfs_config command found, will try listing directly
[2024-06-27 17:13:25] CVMFS is ok
[2024-06-27 17:13:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 17:13:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 17:13:25] Further information can be found at the LHC@home message board.
[2024-06-27 17:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 17:13:25] Checking for apptainer binary...
[2024-06-27 17:13:25] which: no apptainer in ((null))
[2024-06-27 17:13:25] apptainer is not installed, using version from CVMFS
[2024-06-27 17:13:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 17:13:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-27 17:13:26] apptainer works
[2024-06-27 17:13:26] Set ATHENA_PROC_NUMBER=4
[2024-06-27 17:13:26] Set ATHENA_CORE_NUMBER=4
[2024-06-27 17:13:26] Starting ATLAS job with PandaID=6246093675
[2024-06-27 17:13:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 22:35:06]  *** The last 200 lines of the pilot log: ***
[2024-06-27 22:35:06] 2024-06-27 20:34:51,305 | INFO     | intersect: -31921294261.731934
[2024-06-27 22:35:06] 2024-06-27 20:34:51,305 | INFO     | chi2: 4.632785183651247
[2024-06-27 22:35:06] 2024-06-27 20:34:51,305 | INFO     | current chi2=4.632785183651247 (change=0.07946244543388603 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,306 | INFO     | right removable region: 310
[2024-06-27 22:35:06] 2024-06-27 20:34:51,306 | INFO     | model: linear, x: [1719501540.0, 1719501601.0, 1719501662.0, 1719501723.0, 1719501784.0, 1719501845.0, 1719501906.0, 1719501967.0, 1719502028.0, 1719502089.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,306 | INFO     | sum of square deviations: 9327281860.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,307 | INFO     | sum of deviations: 96845373209.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,307 | INFO     | mean x: 1719510995.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | mean y: 2337217.4340836015
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | -- intersect: -17851383357.034966
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | intersect: -17851383357.034966
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | chi2: 1.939711077369895
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | current chi2=1.939711077369895 (change=58.16404908319252 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | model: linear, x: [1719501845.0, 1719501906.0, 1719501967.0, 1719502028.0, 1719502089.0, 1719502150.0, 1719502211.0, 1719502272.0, 1719502333.0, 1719502394.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,308 | INFO     | sum of square deviations: 8884603792.5
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | sum of deviations: 35139911106.50001
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | mean x: 1719511147.5
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | mean y: 2358475.81372549
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | -- intersect: -6798560313.698611
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | intersect: -6798560313.698611
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | chi2: 0.38150888095050156
[2024-06-27 22:35:06] 2024-06-27 20:34:51,310 | INFO     | current chi2=0.38150888095050156 (change=80.33166457615948 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,311 | INFO     | model: linear, x: [1719502150.0, 1719502211.0, 1719502272.0, 1719502333.0, 1719502394.0, 1719502455.0, 1719502516.0, 1719502577.0, 1719502638.0, 1719502699.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,311 | INFO     | sum of square deviations: 8456158550.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,312 | INFO     | sum of deviations: 13011420047.999998
[2024-06-27 22:35:06] 2024-06-27 20:34:51,312 | INFO     | mean x: 1719511300.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,312 | INFO     | mean y: 2366298.003322259
[2024-06-27 22:35:06] 2024-06-27 20:34:51,312 | INFO     | -- intersect: -2643431278.909724
[2024-06-27 22:35:06] 2024-06-27 20:34:51,313 | INFO     | intersect: -2643431278.909724
[2024-06-27 22:35:06] 2024-06-27 20:34:51,313 | INFO     | chi2: 0.022225064555768437
[2024-06-27 22:35:06] 2024-06-27 20:34:51,313 | INFO     | current chi2=0.022225064555768437 (change=94.17443061865393 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,313 | INFO     | model: linear, x: [1719502455.0, 1719502516.0, 1719502577.0, 1719502638.0, 1719502699.0, 1719502760.0, 1719502821.0, 1719502882.0, 1719502943.0, 1719503004.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,313 | INFO     | sum of square deviations: 8041713570.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | sum of deviations: 8106854067.000005
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | mean x: 1719511452.5
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | mean y: 2368092.4324324327
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | -- intersect: -1731071962.4280033
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | intersect: -1731071962.4280033
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | chi2: 0.009303210460963982
[2024-06-27 22:35:06] 2024-06-27 20:34:51,315 | INFO     | current chi2=0.009303210460963982 (change=58.14090691336432 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,316 | INFO     | model: linear, x: [1719502760.0, 1719502821.0, 1719502882.0, 1719502943.0, 1719503004.0, 1719503065.0, 1719503126.0, 1719503187.0, 1719503248.0, 1719503309.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,316 | INFO     | sum of square deviations: 7641036290.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | sum of deviations: 6497338384.000002
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | mean x: 1719511605.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | mean y: 2368704.965635739
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | -- intersect: -1459769194.7746558
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | intersect: -1459769194.7746558
[2024-06-27 22:35:06] 2024-06-27 20:34:51,317 | INFO     | chi2: 0.008622222782373581
[2024-06-27 22:35:06] 2024-06-27 20:34:51,318 | INFO     | current chi2=0.008622222782373581 (change=7.319921240606196 %)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,318 | INFO     | left removable region: 50
[2024-06-27 22:35:06] 2024-06-27 20:34:51,318 | INFO     | model: linear, x: [1719504285.0, 1719504346.0, 1719504407.0, 1719504468.0, 1719504529.0, 1719504590.0, 1719504651.0, 1719504712.0, 1719504773.0, 1719504834.0, 1719
[2024-06-27 22:35:06] 2024-06-27 20:34:51,318 | INFO     | sum of square deviations: 5449944045.0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,319 | INFO     | sum of deviations: 4390593706.000006
[2024-06-27 22:35:06] 2024-06-27 20:34:51,319 | INFO     | mean x: 1719512184.5
[2024-06-27 22:35:06] 2024-06-27 20:34:51,319 | INFO     | mean y: 2370570.623076923
[2024-06-27 22:35:06] 2024-06-27 20:34:51,319 | INFO     | -- intersect: -1382905922.551638
[2024-06-27 22:35:06] 2024-06-27 20:34:51,319 | INFO     | intersect: -1382905922.551638
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | chi2: 0.0069412875078930574
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | -- intersect: -1382905922.551638
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | current memory leak: 0.81 B/s (using 260 data points, chi2=0.01)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | ..............................
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | . Timing measurements:
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | . get job = 0 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | . initial setup = 1 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | . payload setup = 4 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,320 | INFO     | . stage-in = 0 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,321 | INFO     | . payload execution = 19246 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,321 | INFO     | . stage-out = 0 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,321 | INFO     | . log creation = 0 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,321 | INFO     | ..............................
[2024-06-27 22:35:06] 2024-06-27 20:34:51,708 | INFO     | 
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | job summary report
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | --------------------------------------------------
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | PanDA job id: 6246093675
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | task id: 40102872
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | errors: (none)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 22:35:06] 2024-06-27 20:34:51,709 | INFO     | pilot state: finished 
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | transexitcode: 0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | exeerrorcode: 0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | exeerrordiag: 
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | exitcode: 0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | exitmsg: OK
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | cpuconsumptiontime: 73232 s
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | nevents: 400
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | neventsw: 0
[2024-06-27 22:35:06] 2024-06-27 20:34:51,710 | INFO     | pid: 340958
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | pgrp: 340958
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | corecount: 4
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | event service: False
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | sizes: {0: 2387023, 4: 2387229, 11: 2387257, 19254: 2420336, 19255: 2429318, 19258: 2429374, 19264: 2429672}
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | --------------------------------------------------
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | 
[2024-06-27 22:35:06] 2024-06-27 20:34:51,711 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/1
[2024-06-27 22:35:06] 2024-06-27 20:34:51,727 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | job 6246093675 has completed (purged errors)
[2024-06-27 22:35:06] 2024-06-27 20:34:51,729 | INFO     | overall cleanup function is called
[2024-06-27 22:35:06] 2024-06-27 20:34:52,735 | INFO     | --- collectZombieJob: --- 10, [340958]
[2024-06-27 22:35:06] 2024-06-27 20:34:52,735 | INFO     | zombie collector waiting for pid 340958
[2024-06-27 22:35:06] 2024-06-27 20:34:52,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 22:35:06] 2024-06-27 20:34:53,741 | INFO     | collected zombie processes
[2024-06-27 22:35:06] 2024-06-27 20:34:53,741 | INFO     | will now attempt to kill all subprocesses of pid=340958
[2024-06-27 22:35:06] 2024-06-27 20:34:53,819 | INFO     | process IDs to be killed: [340958] (in reverse order)
[2024-06-27 22:35:06] 2024-06-27 20:34:53,873 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 22:35:06] 2024-06-27 20:34:53,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 22:35:06] 2024-06-27 20:34:53,877 | INFO     | did not find any defunct processes belonging to 340958
[2024-06-27 22:35:06] 2024-06-27 20:34:53,881 | INFO     | did not find any defunct processes belonging to 340958
[2024-06-27 22:35:06] 2024-06-27 20:34:53,881 | INFO     | ready for new job
[2024-06-27 22:35:06] 2024-06-27 20:34:53,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 22:35:06] 2024-06-27 20:34:53,883 | INFO     | *************************************
[2024-06-27 22:35:06] 2024-06-27 20:34:53,883 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 22:35:06] 2024-06-27 20:34:53,883 | INFO     | *************************************
[2024-06-27 22:35:06] 2024-06-27 20:34:53,883 | INFO     | 
[2024-06-27 22:35:06] 2024-06-27 20:34:53,885 | INFO     | architecture information:
[2024-06-27 22:35:06] 2024-06-27 20:34:53,885 | INFO     | executing command: cat /etc/os-release
[2024-06-27 22:35:06] 2024-06-27 20:34:53,895 | INFO     | cat /etc/os-release:
[2024-06-27 22:35:06] NAME="CentOS Linux"
[2024-06-27 22:35:06] VERSION="7 (Core)"
[2024-06-27 22:35:06] ID="centos"
[2024-06-27 22:35:06] ID_LIKE="rhel fedora"
[2024-06-27 22:35:06] VERSION_ID="7"
[2024-06-27 22:35:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 22:35:06] ANSI_COLOR="0;31"
[2024-06-27 22:35:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 22:35:06] HOME_URL="https://www.centos.org/"
[2024-06-27 22:35:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 22:35:06] 
[2024-06-27 22:35:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 22:35:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 22:35:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 22:35:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 22:35:06] 
[2024-06-27 22:35:06] 2024-06-27 20:34:53,896 | INFO     | *************************************
[2024-06-27 22:35:06] 2024-06-27 20:34:54,399 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/1
[2024-06-27 22:35:06] 2024-06-27 20:34:54,414 | INFO     | sufficient remaining disk space (1684911685632 B)
[2024-06-27 22:35:06] 2024-06-27 20:34:54,414 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 22:35:06] 2024-06-27 20:34:54,414 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 22:35:06] 2024-06-27 20:34:54,785 | INFO     | all data control threads have been joined
[2024-06-27 22:35:06] 2024-06-27 20:34:55,378 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 22:35:06] 2024-06-27 20:34:55,378 | INFO     | aborting loop
[2024-06-27 22:35:06] 2024-06-27 20:34:55,412 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 22:35:06] 2024-06-27 20:34:55,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 22:35:06] 2024-06-27 20:34:55,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 22:35:06] 2024-06-27 20:34:55,419 | INFO     | [job] retrieve thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:55,503 | INFO     | all job control threads have been joined
[2024-06-27 22:35:06] 2024-06-27 20:34:55,509 | INFO     | all payload control threads have been joined
[2024-06-27 22:35:06] 2024-06-27 20:34:55,613 | INFO     | [payload] failed_post thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:55,697 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:55,790 | INFO     | [data] control thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:55,828 | INFO     | [job] validate thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:55,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 22:35:06] 2024-06-27 20:34:55,905 | INFO     | [payload] validate_post thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,025 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,383 | INFO     | [job] job monitor thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 22:35:06] 2024-06-27 20:34:56,407 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,509 | INFO     | [job] control thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,514 | INFO     | [payload] control thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,551 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:56,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 22:35:06] 2024-06-27 20:34:56,718 | INFO     | [data] copytool_in thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:57,391 | INFO     | [job] queue monitor thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:34:57,894 | INFO     | [data] copytool_out thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:35:00,580 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 22:35:06] 2024-06-27 20:35:01,117 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47370880283712)>', '<ExcThread(monitor, started 47371059959552)>']
[2024-06-27 22:35:06] 2024-06-27 20:35:01,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 22:35:06] 2024-06-27 20:35:01,443 | INFO     | [monitor] control thread has ended
[2024-06-27 22:35:06] 2024-06-27 20:35:06,141 | INFO     | all workflow threads have been joined
[2024-06-27 22:35:06] 2024-06-27 20:35:06,142 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 22:35:06] 2024-06-27 20:35:06,142 | INFO     | traces error code: 0
[2024-06-27 22:35:06] 2024-06-27 20:35:06,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 22:35:06] 2024-06-27 20:35:06,227 [wrapper] ==== pilot stdout END ====
[2024-06-27 22:35:06] 2024-06-27 20:35:06,230 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 22:35:06] 2024-06-27 20:35:06,232 [wrapper] pilotpid: 334023
[2024-06-27 22:35:06] 2024-06-27 20:35:06,234 [wrapper] Pilot exit status: 0
[2024-06-27 22:35:06] 2024-06-27 20:35:06,245 [wrapper] pandaids: 6246093675 6246093675
[2024-06-27 22:35:06] 2024-06-27 20:35:06,294 [wrapper] cleanup supervisor_pilot  753183 334024
[2024-06-27 22:35:06] 2024-06-27 20:35:06,296 [wrapper] Test setup, not cleaning
[2024-06-27 22:35:06] 2024-06-27 20:35:06,297 [wrapper] ==== wrapper stdout END ====
[2024-06-27 22:35:06] 2024-06-27 20:35:06,299 [wrapper] ==== wrapper stderr END ====
[2024-06-27 22:35:06] 2024-06-27 20:35:06,303 [wrapper] apfmon messages muted
[2024-06-27 22:35:06]  *** Error codes and diagnostics ***
[2024-06-27 22:35:06]     "exeErrorCode": 0,
[2024-06-27 22:35:06]     "exeErrorDiag": "",
[2024-06-27 22:35:06]     "pilotErrorCode": 0,
[2024-06-27 22:35:06]     "pilotErrorDiag": "",
[2024-06-27 22:35:06]  *** Listing of results directory ***
[2024-06-27 22:35:06] total 939784
[2024-06-27 22:35:06] drwx------ 4 boinc boinc      4096 Jun 12 12:00 pilot3
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:42 pilot3.tar.gz
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:53 queuedata.json
[2024-06-27 22:35:06] -rwx------ 1 boinc boinc     32220 Jun 27 14:54 runpilot2-wrapper.sh
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc       100 Jun 27 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 22:35:06] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 16:05 run_atlas
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc       105 Jun 27 16:05 job.xml
[2024-06-27 22:35:06] -rw-r--r-- 3 boinc boinc 388953693 Jun 27 16:05 EVNT.34668890._000002.pool.root.1
[2024-06-27 22:35:06] -rw-r--r-- 3 boinc boinc 388953693 Jun 27 16:05 ATLAS.root_0
[2024-06-27 22:35:06] -rw-r--r-- 2 boinc boinc     17537 Jun 27 16:05 start_atlas.sh
[2024-06-27 22:35:06] drwxrwx--x 2 boinc boinc      4096 Jun 27 16:05 shared
[2024-06-27 22:35:06] -rw-r--r-- 2 boinc boinc    482502 Jun 27 16:05 input.tar.gz
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc         0 Jun 27 16:05 boinc_lockfile
[2024-06-27 22:35:06] -rw------- 1 boinc boinc   1321363 Jun 27 16:06 cric_ddmendpoints.json
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc      2600 Jun 27 17:13 pandaJob.out
[2024-06-27 22:35:06] -rw------- 1 boinc boinc       424 Jun 27 17:13 setup.sh.local
[2024-06-27 22:35:06] -rw------- 1 boinc boinc   1034827 Jun 27 17:13 agis_schedconf.cvmfs.json
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc      6464 Jun 27 21:05 init_data.xml
[2024-06-27 22:35:06] -rw------- 1 boinc boinc 175795364 Jun 27 22:34 HITS.40102872._000048.pool.root.1
[2024-06-27 22:35:06] -rw------- 1 boinc boinc        97 Jun 27 22:34 pilot_heartbeat.json
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc       531 Jun 27 22:34 boinc_task_state.xml
[2024-06-27 22:35:06] -rw------- 1 boinc boinc      1033 Jun 27 22:34 memory_monitor_summary.json
[2024-06-27 22:35:06] -rw------- 1 boinc boinc         0 Jun 27 22:34 agis_ddmendpoints.agis.ALL.json
[2024-06-27 22:35:06] -rw------- 1 boinc boinc    405858 Jun 27 22:34 log.40102872._000048.job.log.tgz.1
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc      8192 Jun 27 22:34 boinc_mmap_file
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc        28 Jun 27 22:34 wrapper_checkpoint.txt
[2024-06-27 22:35:06] -rw------- 1 boinc boinc      7746 Jun 27 22:34 heartbeat.json
[2024-06-27 22:35:06] -rw------- 1 boinc boinc      4222 Jun 27 22:35 pilotlog.txt
[2024-06-27 22:35:06] -rw------- 1 boinc boinc   2135688 Jun 27 22:35 log.40102872._000048.job.log.1
[2024-06-27 22:35:06] -rw------- 1 boinc boinc       357 Jun 27 22:35 output.list
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc       620 Jun 27 22:35 runtime_log
[2024-06-27 22:35:06] -rw------- 1 boinc boinc   2560000 Jun 27 22:35 result.tar.gz
[2024-06-27 22:35:06] -rw------- 1 boinc boinc       771 Jun 27 22:35 v1ANDmUp3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmw4oKDm5j5wXm.diag
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc     11487 Jun 27 22:35 runtime_log.err
[2024-06-27 22:35:06] -rw-r--r-- 1 boinc boinc     23227 Jun 27 22:35 stderr.txt
[2024-06-27 22:35:06] HITS file was successfully produced:
[2024-06-27 22:35:06] -rw------- 1 boinc boinc 175795364 Jun 27 22:34 shared/HITS.pool.root.1
[2024-06-27 22:35:06]  *** Contents of shared directory: ***
[2024-06-27 22:35:06] total 554516
[2024-06-27 22:35:06] -rw-r--r-- 3 boinc boinc 388953693 Jun 27 16:05 ATLAS.root_0
[2024-06-27 22:35:06] -rw-r--r-- 2 boinc boinc     17537 Jun 27 16:05 start_atlas.sh
[2024-06-27 22:35:06] -rw-r--r-- 2 boinc boinc    482502 Jun 27 16:05 input.tar.gz
[2024-06-27 22:35:06] -rw------- 1 boinc boinc 175795364 Jun 27 22:34 HITS.pool.root.1
[2024-06-27 22:35:06] -rw------- 1 boinc boinc   2560000 Jun 27 22:35 result.tar.gz
22:35:08 (330343): run_atlas exited; CPU time 73031.689958
22:35:08 (330343): called boinc_finish(0)

</stderr_txt>
]]>

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