Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:26:51 (130301): wrapper (7.7.26015): starting
11:26:51 (130301): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 11:26:51] Arguments: --nthreads 12
[2024-06-27 11:26:51] Threads: 12
[2024-06-27 11:26:51] Checking for CVMFS
[2024-06-27 11:26:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 11:26:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 11:26:52] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 11:26:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 11:26:52] 2.9.2.0 9154 242877 131344 134353 3 505 25784386 45568000 6782 130560 0 1438929195 99.790 862880234 3429 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 11:26:52] CVMFS is ok
[2024-06-27 11:26:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 11:26:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 11:26:52] Further information can be found at the LHC@home message board.
[2024-06-27 11:26:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 11:26:52] Checking for apptainer binary...
[2024-06-27 11:26:52] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 11:26:52] Running /usr/bin/apptainer --version
[2024-06-27 11:26:52] apptainer version 1.3.2-1.el7
[2024-06-27 11:26:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 11:26:53] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0053.triumf.lcg
[2024-06-27 11:26:53] apptainer works
[2024-06-27 11:26:53] Set ATHENA_PROC_NUMBER=12
[2024-06-27 11:26:53] Set ATHENA_CORE_NUMBER=12
[2024-06-27 11:26:53] Starting ATLAS job with PandaID=6246093172
[2024-06-27 11:26:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 13:33:43]  *** The last 200 lines of the pilot log: ***
[2024-06-27 13:33:43] 2024-06-27 20:33:28,374 | INFO     | chi2: 5.4408514381257955
[2024-06-27 13:33:43] 2024-06-27 20:33:28,374 | INFO     | model: linear, x: [1719512862.0, 1719512923.0, 1719512984.0, 1719513045.0, 1719513106.0, 1719513167.0, 1719513228.0, 1719513289.0, 1719513350.0, 1719513411.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,375 | INFO     | sum of square deviations: 522491779.9663867
[2024-06-27 13:33:43] 2024-06-27 20:33:28,375 | INFO     | sum of deviations: 61272043346.28571
[2024-06-27 13:33:43] 2024-06-27 20:33:28,375 | INFO     | mean x: 1719516461.159664
[2024-06-27 13:33:43] 2024-06-27 20:33:28,376 | INFO     | mean y: 2693836.1428571427
[2024-06-27 13:33:43] 2024-06-27 20:33:28,376 | INFO     | -- intersect: -201643133299.3668
[2024-06-27 13:33:43] 2024-06-27 20:33:28,376 | INFO     | intersect: -201643133299.3668
[2024-06-27 13:33:43] 2024-06-27 20:33:28,376 | INFO     | chi2: 5.380145559289944
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | current chi2=5.380145559289944 (change=1.1157422606775484 %)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | right removable region: 118
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | model: linear, x: [1719513167.0, 1719513228.0, 1719513289.0, 1719513350.0, 1719513411.0, 1719513472.0, 1719513533.0, 1719513594.0, 1719513655.0, 1719513720.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | sum of square deviations: 522480189.9663867
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | sum of deviations: 26288920229.57143
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | mean x: 1719516766.159664
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | mean y: 2770961.285714286
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | -- intersect: -86515799440.1877
[2024-06-27 13:33:43] 2024-06-27 20:33:28,377 | INFO     | intersect: -86515799440.1877
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | chi2: 2.6611403661666726
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | current chi2=2.6611403661666726 (change=51.08963373785201 %)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | model: linear, x: [1719513472.0, 1719513533.0, 1719513594.0, 1719513655.0, 1719513720.0, 1719513777.0, 1719513838.0, 1719513899.0, 1719513960.0, 1719514021.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | sum of square deviations: 459338327.33333206
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | sum of deviations: -1459861640.0000021
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | mean x: 1719516918.6666667
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | mean y: 2838012.9210526315
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | -- intersect: 5467778862.655175
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | intersect: 5467778862.655175
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | chi2: 0.9505239951272325
[2024-06-27 13:33:43] 2024-06-27 20:33:28,378 | INFO     | current chi2=0.9505239951272325 (change=64.28132813991897 %)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | model: linear, x: [1719513777.0, 1719513838.0, 1719513899.0, 1719513960.0, 1719514021.0, 1719514084.0, 1719514143.0, 1719514204.0, 1719514265.0, 1719514326.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | sum of square deviations: 401525714.935781
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | sum of deviations: -17328148200.14679
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | mean x: 1719517071.1376147
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | mean y: 2879195.743119266
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | -- intersect: 74209948713.3715
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | intersect: 74209948713.3715
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | chi2: 0.10258566486130599
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | current chi2=0.10258566486130599 (change=89.20746184344621 %)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,379 | INFO     | model: linear, x: [1719514084.0, 1719514143.0, 1719514204.0, 1719514265.0, 1719514326.0, 1719514387.0, 1719514448.0, 1719514509.0, 1719514570.0, 1719514631.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | sum of square deviations: 348757359.83653814
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | sum of deviations: -17448511684.009613
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | mean x: 1719517223.6442308
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | mean y: 2879522.5673076925
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | -- intersect: 86031218484.86041
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | intersect: 86031218484.86041
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | chi2: 0.08741486888959592
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | current chi2=0.08741486888959592 (change=14.788417068038425 %)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | left removable region: 40
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | model: linear, x: [1719515302.0, 1719515363.0, 1719515424.0, 1719515485.0, 1719515546.0, 1719515607.0, 1719515668.0, 1719515729.0, 1719515790.0, 1719515851.0, 1719
[2024-06-27 13:33:43] 2024-06-27 20:33:28,380 | INFO     | sum of square deviations: 147125603.94871816
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | sum of deviations: -10832706355.512823
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | mean x: 1719517650.6410255
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | mean y: 2877668.9102564105
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | -- intersect: 126609187397.35236
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | intersect: 126609187397.35236
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | chi2: 0.05924082197345453
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | -- intersect: 126609187397.35236
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | current memory leak: -73.63 B/s (using 78 data points, chi2=0.06)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,381 | INFO     | ..............................
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . Timing measurements:
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . get job = 0 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . initial setup = 1 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . payload setup = 6 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . stage-in = 0 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . payload execution = 7545 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . stage-out = 0 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | . log creation = 0 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,382 | INFO     | ..............................
[2024-06-27 13:33:43] 2024-06-27 20:33:28,435 | INFO     | 
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | job summary report
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | --------------------------------------------------
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | PanDA job id: 6246093172
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | task id: 40102851
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | errors: (none)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | pilot state: finished 
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | transexitcode: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | exeerrorcode: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | exeerrordiag: 
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | exitcode: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | exitmsg: OK
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | cpuconsumptiontime: 59545 s
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | nevents: 400
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | neventsw: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | pid: 140361
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | pgrp: 140361
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | corecount: 12
[2024-06-27 13:33:43] 2024-06-27 20:33:28,436 | INFO     | event service: False
[2024-06-27 13:33:43] 2024-06-27 20:33:28,437 | INFO     | sizes: {0: 2386999, 6: 2387205, 11: 2387233, 7556: 2414572, 7557: 2423582, 7563: 2423696}
[2024-06-27 13:33:43] 2024-06-27 20:33:28,437 | INFO     | --------------------------------------------------
[2024-06-27 13:33:43] 2024-06-27 20:33:28,437 | INFO     | 
[2024-06-27 13:33:43] 2024-06-27 20:33:28,437 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 13:33:43] 2024-06-27 20:33:28,450 | WARNING  | process 140361 is no longer using CPU - aborting
[2024-06-27 13:33:43] 2024-06-27 20:33:28,451 | INFO     | aborting job monitoring since job object (job id=6246093172) has expired
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | job 6246093172 has completed (purged errors)
[2024-06-27 13:33:43] 2024-06-27 20:33:28,476 | INFO     | overall cleanup function is called
[2024-06-27 13:33:43] 2024-06-27 20:33:29,478 | INFO     | --- collectZombieJob: --- 10, [140361]
[2024-06-27 13:33:43] 2024-06-27 20:33:29,478 | INFO     | zombie collector waiting for pid 140361
[2024-06-27 13:33:43] 2024-06-27 20:33:29,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 13:33:43] 2024-06-27 20:33:30,480 | INFO     | collected zombie processes
[2024-06-27 13:33:43] 2024-06-27 20:33:30,480 | INFO     | will now attempt to kill all subprocesses of pid=140361
[2024-06-27 13:33:43] 2024-06-27 20:33:30,570 | INFO     | process IDs to be killed: [140361] (in reverse order)
[2024-06-27 13:33:43] 2024-06-27 20:33:30,646 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 13:33:43] 2024-06-27 20:33:30,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 13:33:43] 2024-06-27 20:33:30,650 | INFO     | did not find any defunct processes belonging to 140361
[2024-06-27 13:33:43] 2024-06-27 20:33:30,653 | INFO     | did not find any defunct processes belonging to 140361
[2024-06-27 13:33:43] 2024-06-27 20:33:30,654 | INFO     | ready for new job
[2024-06-27 13:33:43] 2024-06-27 20:33:30,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 13:33:43] 2024-06-27 20:33:30,655 | INFO     | *************************************
[2024-06-27 13:33:43] 2024-06-27 20:33:30,655 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 13:33:43] 2024-06-27 20:33:30,655 | INFO     | *************************************
[2024-06-27 13:33:43] 2024-06-27 20:33:30,655 | INFO     | 
[2024-06-27 13:33:43] 2024-06-27 20:33:30,657 | INFO     | architecture information:
[2024-06-27 13:33:43] 2024-06-27 20:33:30,657 | INFO     | executing command: cat /etc/os-release
[2024-06-27 13:33:43] 2024-06-27 20:33:30,680 | INFO     | cat /etc/os-release:
[2024-06-27 13:33:43] NAME="CentOS Linux"
[2024-06-27 13:33:43] VERSION="7 (Core)"
[2024-06-27 13:33:43] ID="centos"
[2024-06-27 13:33:43] ID_LIKE="rhel fedora"
[2024-06-27 13:33:43] VERSION_ID="7"
[2024-06-27 13:33:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 13:33:43] ANSI_COLOR="0;31"
[2024-06-27 13:33:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 13:33:43] HOME_URL="https://www.centos.org/"
[2024-06-27 13:33:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 13:33:43] 
[2024-06-27 13:33:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 13:33:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 13:33:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 13:33:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 13:33:43] 
[2024-06-27 13:33:43] 2024-06-27 20:33:30,681 | INFO     | *************************************
[2024-06-27 13:33:43] 2024-06-27 20:33:31,181 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 13:33:43] 2024-06-27 20:33:31,205 | INFO     | sufficient remaining disk space (2051439329280 B)
[2024-06-27 13:33:43] 2024-06-27 20:33:31,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 13:33:43] 2024-06-27 20:33:31,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 13:33:43] 2024-06-27 20:33:31,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 13:33:43] 2024-06-27 20:33:31,320 | INFO     | all job control threads have been joined
[2024-06-27 13:33:43] 2024-06-27 20:33:31,421 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 13:33:43] 2024-06-27 20:33:31,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 13:33:43] 2024-06-27 20:33:31,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 13:33:43] 2024-06-27 20:33:31,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:33:43] 2024-06-27 20:33:31,955 | INFO     | aborting loop
[2024-06-27 13:33:43] 2024-06-27 20:33:32,210 | INFO     | [job] retrieve thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:32,238 | INFO     | [payload] validate_post thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:32,281 | INFO     | all data control threads have been joined
[2024-06-27 13:33:43] 2024-06-27 20:33:32,321 | INFO     | [job] control thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:32,382 | INFO     | all payload control threads have been joined
[2024-06-27 13:33:43] 2024-06-27 20:33:32,508 | INFO     | [job] validate thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:32,725 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:32,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 13:33:43] 2024-06-27 20:33:32,961 | INFO     | [job] job monitor thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,087 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,206 | INFO     | [data] copytool_out thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,229 | INFO     | [data] copytool_in thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,270 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,282 | INFO     | [data] control thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,383 | INFO     | [payload] control thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:33:43] 2024-06-27 20:33:33,501 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:33,683 | INFO     | [payload] failed_post thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:34,447 | INFO     | [job] queue monitor thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:36,904 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 13:33:43] 2024-06-27 20:33:37,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140424212129600)>', '<ExcThread(monitor, started 140423477585664)>']
[2024-06-27 13:33:43] 2024-06-27 20:33:37,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 13:33:43] 2024-06-27 20:33:37,439 | INFO     | [monitor] control thread has ended
[2024-06-27 13:33:43] 2024-06-27 20:33:42,150 | INFO     | all workflow threads have been joined
[2024-06-27 13:33:43] 2024-06-27 20:33:42,150 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 13:33:43] 2024-06-27 20:33:42,150 | INFO     | traces error code: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:42,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 13:33:43] 2024-06-27 20:33:42,231 [wrapper] ==== pilot stdout END ====
[2024-06-27 13:33:43] 2024-06-27 20:33:42,236 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 13:33:43] 2024-06-27 20:33:42,240 [wrapper] pilotpid: 133956
[2024-06-27 13:33:43] 2024-06-27 20:33:42,245 [wrapper] Pilot exit status: 0
[2024-06-27 13:33:43] 2024-06-27 20:33:42,268 [wrapper] pandaids: 6246093172
[2024-06-27 13:33:43] 2024-06-27 20:33:42,317 [wrapper] cleanup supervisor_pilot  51398 133957
[2024-06-27 13:33:43] 2024-06-27 20:33:42,323 [wrapper] Test setup, not cleaning
[2024-06-27 13:33:43] 2024-06-27 20:33:42,327 [wrapper] ==== wrapper stdout END ====
[2024-06-27 13:33:43] 2024-06-27 20:33:42,332 [wrapper] ==== wrapper stderr END ====
[2024-06-27 13:33:43] 2024-06-27 20:33:42,340 [wrapper] apfmon messages muted
[2024-06-27 13:33:43]  *** Error codes and diagnostics ***
[2024-06-27 13:33:43]     "exeErrorCode": 0,
[2024-06-27 13:33:43]     "exeErrorDiag": "",
[2024-06-27 13:33:43]     "pilotErrorCode": 0,
[2024-06-27 13:33:43]     "pilotErrorDiag": "",
[2024-06-27 13:33:43]  *** Listing of results directory ***
[2024-06-27 13:33:43] total 574528
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 13:33:43] -rwx------ 1 boinc boinc     32220 Jun 27 05:43 runpilot2-wrapper.sh
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:49 queuedata.json
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc       100 Jun 27 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 13:33:43] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 11:26 run_atlas
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc       105 Jun 27 11:26 job.xml
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc      6627 Jun 27 11:26 init_data.xml
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc 394241196 Jun 27 11:26 EVNT.34668800._000001.pool.root.1
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc     17537 Jun 27 11:26 start_atlas.sh
[2024-06-27 13:33:43] drwxrwx--x 2 boinc boinc      4096 Jun 27 11:26 shared
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc    482494 Jun 27 11:26 input.tar.gz
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc         0 Jun 27 11:26 boinc_lockfile
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc      2591 Jun 27 11:26 pandaJob.out
[2024-06-27 13:33:43] -rw------- 1 boinc boinc       424 Jun 27 11:26 setup.sh.local
[2024-06-27 13:33:43] -rw------- 1 boinc boinc   1034827 Jun 27 11:27 agis_schedconf.cvmfs.json
[2024-06-27 13:33:43] -rw------- 1 boinc boinc         0 Jun 27 11:27 agis_ddmendpoints.agis.ALL.json
[2024-06-27 13:33:43] -rw------- 1 boinc boinc   1321363 Jun 27 11:27 cric_ddmendpoints.json
[2024-06-27 13:33:43] drwx------ 4 boinc boinc      4096 Jun 27 11:27 pilot3
[2024-06-27 13:33:43] -rw------- 1 boinc boinc        95 Jun 27 13:32 pilot_heartbeat.json
[2024-06-27 13:33:43] -rw------- 1 boinc boinc 188373389 Jun 27 13:32 HITS.40102851._000017.pool.root.1
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc       529 Jun 27 13:33 boinc_task_state.xml
[2024-06-27 13:33:43] -rw------- 1 boinc boinc      1055 Jun 27 13:33 memory_monitor_summary.json
[2024-06-27 13:33:43] -rw------- 1 boinc boinc    397137 Jun 27 13:33 log.40102851._000017.job.log.tgz.1
[2024-06-27 13:33:43] -rw------- 1 boinc boinc      7760 Jun 27 13:33 heartbeat.json
[2024-06-27 13:33:43] -rw------- 1 boinc boinc      4210 Jun 27 13:33 pilotlog.txt
[2024-06-27 13:33:43] -rw------- 1 boinc boinc    683174 Jun 27 13:33 log.40102851._000017.job.log.1
[2024-06-27 13:33:43] -rw------- 1 boinc boinc       357 Jun 27 13:33 output.list
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc       620 Jun 27 13:33 runtime_log
[2024-06-27 13:33:43] -rw------- 1 boinc boinc   1095680 Jun 27 13:33 result.tar.gz
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc     11286 Jun 27 13:33 runtime_log.err
[2024-06-27 13:33:43] -rw------- 1 boinc boinc       659 Jun 27 13:33 ifaKDmQe3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmt0oKDmYOXu5n.diag
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc        27 Jun 27 13:33 wrapper_checkpoint.txt
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc      8192 Jun 27 13:33 boinc_mmap_file
[2024-06-27 13:33:43] -rw-r--r-- 1 boinc boinc     21909 Jun 27 13:33 stderr.txt
[2024-06-27 13:33:43] HITS file was successfully produced:
[2024-06-27 13:33:43] -rw------- 1 boinc boinc 188373389 Jun 27 13:32 shared/HITS.pool.root.1
[2024-06-27 13:33:43]  *** Contents of shared directory: ***
[2024-06-27 13:33:43] total 570536
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc 394241196 Jun 27 11:26 ATLAS.root_0
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc     17537 Jun 27 11:26 start_atlas.sh
[2024-06-27 13:33:43] -rw-r--r-- 2 boinc boinc    482494 Jun 27 11:26 input.tar.gz
[2024-06-27 13:33:43] -rw------- 1 boinc boinc 188373389 Jun 27 13:32 HITS.pool.root.1
[2024-06-27 13:33:43] -rw------- 1 boinc boinc   1095680 Jun 27 13:33 result.tar.gz
13:33:44 (130301): run_atlas exited; CPU time 59288.005995
13:33:44 (130301): called boinc_finish(0)

</stderr_txt>
]]>

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