Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:45:19 (790481): wrapper (7.7.26015): starting
22:45:19 (790481): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 22:45:19] Arguments: --nthreads 4
[2024-06-27 22:45:19] Threads: 4
[2024-06-27 22:45:19] Checking for CVMFS
[2024-06-27 22:45:19] No cvmfs_config command found, will try listing directly
[2024-06-27 22:45:19] CVMFS is ok
[2024-06-27 22:45:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 22:45:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 22:45:19] Further information can be found at the LHC@home message board.
[2024-06-27 22:45:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 22:45:19] Checking for apptainer binary...
[2024-06-27 22:45:19] which: no apptainer in ((null))
[2024-06-27 22:45:19] apptainer is not installed, using version from CVMFS
[2024-06-27 22:45:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 22:45:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2024-06-27 22:45:20] apptainer works
[2024-06-27 22:45:20] Set ATHENA_PROC_NUMBER=4
[2024-06-27 22:45:20] Set ATHENA_CORE_NUMBER=4
[2024-06-27 22:45:20] Starting ATLAS job with PandaID=6246092898
[2024-06-27 22:45:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 03:09:12]  *** The last 200 lines of the pilot log: ***
[2024-06-28 03:09:12] 2024-06-28 01:08:50,772 | INFO     | model: linear, x: [1719521149.0, 1719521210.0, 1719521271.0, 1719521332.0, 1719521393.0, 1719521454.0, 1719521515.0, 1719521576.0, 1719521637.0, 1719521698.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,772 | INFO     | sum of square deviations: 5387301010.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,773 | INFO     | sum of deviations: 71039197732.00005
[2024-06-28 03:09:12] 2024-06-28 01:08:50,773 | INFO     | mean x: 1719529018.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,773 | INFO     | mean y: 2288775.8494208492
[2024-06-28 03:09:12] 2024-06-28 01:08:50,773 | INFO     | -- intersect: -22672137934.087444
[2024-06-28 03:09:12] 2024-06-28 01:08:50,773 | INFO     | intersect: -22672137934.087444
[2024-06-28 03:09:12] 2024-06-28 01:08:50,774 | INFO     | chi2: 4.166965197453985
[2024-06-28 03:09:12] 2024-06-28 01:08:50,774 | INFO     | model: linear, x: [1719521149.0, 1719521210.0, 1719521271.0, 1719521332.0, 1719521393.0, 1719521454.0, 1719521515.0, 1719521576.0, 1719521637.0, 1719521698.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,774 | INFO     | sum of square deviations: 5081276667.5
[2024-06-28 03:09:12] 2024-06-28 01:08:50,775 | INFO     | sum of deviations: 85728014689.99998
[2024-06-28 03:09:12] 2024-06-28 01:08:50,775 | INFO     | mean x: 1719528865.5
[2024-06-28 03:09:12] 2024-06-28 01:08:50,775 | INFO     | mean y: 2295967.7637795275
[2024-06-28 03:09:12] 2024-06-28 01:08:50,775 | INFO     | -- intersect: -29008483308.301495
[2024-06-28 03:09:12] 2024-06-28 01:08:50,775 | INFO     | intersect: -29008483308.301495
[2024-06-28 03:09:12] 2024-06-28 01:08:50,776 | INFO     | chi2: 3.3776866693188405
[2024-06-28 03:09:12] 2024-06-28 01:08:50,776 | INFO     | current chi2=3.3776866693188405 (change=18.94132757857909 %)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,776 | INFO     | right removable region: 253
[2024-06-28 03:09:12] 2024-06-28 01:08:50,776 | INFO     | model: linear, x: [1719521454.0, 1719521515.0, 1719521576.0, 1719521637.0, 1719521698.0, 1719521759.0, 1719521820.0, 1719521881.0, 1719521942.0, 1719522003.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,776 | INFO     | sum of square deviations: 5081276667.5
[2024-06-28 03:09:12] 2024-06-28 01:08:50,777 | INFO     | sum of deviations: 16722789673.000025
[2024-06-28 03:09:12] 2024-06-28 01:08:50,777 | INFO     | mean x: 1719529170.5
[2024-06-28 03:09:12] 2024-06-28 01:08:50,777 | INFO     | mean y: 2315765.2992125982
[2024-06-28 03:09:12] 2024-06-28 01:08:50,777 | INFO     | -- intersect: -5656759017.772457
[2024-06-28 03:09:12] 2024-06-28 01:08:50,777 | INFO     | intersect: -5656759017.772457
[2024-06-28 03:09:12] 2024-06-28 01:08:50,778 | INFO     | chi2: 2.0552703736786384
[2024-06-28 03:09:12] 2024-06-28 01:08:50,778 | INFO     | current chi2=2.0552703736786384 (change=50.67704489266174 %)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,778 | INFO     | model: linear, x: [1719521759.0, 1719521820.0, 1719521881.0, 1719521942.0, 1719522003.0, 1719522064.0, 1719522125.0, 1719522186.0, 1719522247.0, 1719522308.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,778 | INFO     | sum of square deviations: 4787066500.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,779 | INFO     | sum of deviations: -24251555646.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,779 | INFO     | mean x: 1719529323.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,779 | INFO     | mean y: 2337004.5220883535
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | -- intersect: 8713571966.823784
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | intersect: 8713571966.823784
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | chi2: 0.9756543492544665
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | current chi2=0.9756543492544665 (change=52.529148390915324 %)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | model: linear, x: [1719522064.0, 1719522125.0, 1719522186.0, 1719522247.0, 1719522308.0, 1719522369.0, 1719522430.0, 1719522491.0, 1719522552.0, 1719522613.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,780 | INFO     | sum of square deviations: 4504437945.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,781 | INFO     | sum of deviations: -24254838300.00004
[2024-06-28 03:09:12] 2024-06-28 01:08:50,781 | INFO     | mean x: 1719529475.5
[2024-06-28 03:09:12] 2024-06-28 01:08:50,781 | INFO     | mean y: 2336961.680327869
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | -- intersect: 9261407658.088018
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | intersect: 9261407658.088018
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | chi2: 0.9379218947786812
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | current chi2=0.9379218947786812 (change=3.867399812712165 %)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | left removable region: 30
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | model: linear, x: [1719522979.0, 1719523040.0, 1719523101.0, 1719523162.0, 1719523223.0, 1719523284.0, 1719523345.0, 1719523406.0, 1719523467.0, 1719523528.0, 1719
[2024-06-28 03:09:12] 2024-06-28 01:08:50,782 | INFO     | sum of square deviations: 3438620752.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,783 | INFO     | sum of deviations: 10948877434.000002
[2024-06-28 03:09:12] 2024-06-28 01:08:50,783 | INFO     | mean x: 1719529750.0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,783 | INFO     | mean y: 2333613.937219731
[2024-06-28 03:09:12] 2024-06-28 01:08:50,783 | INFO     | -- intersect: -5472803609.589507
[2024-06-28 03:09:12] 2024-06-28 01:08:50,783 | INFO     | intersect: -5472803609.589507
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | chi2: 0.0004980125974029633
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | -- intersect: -5472803609.589507
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | current memory leak: 3.18 B/s (using 223 data points, chi2=0.00)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | ..............................
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | . Timing measurements:
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | . get job = 0 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,784 | INFO     | . initial setup = 1 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | . payload setup = 4 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | . stage-in = 0 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | . payload execution = 15755 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | . stage-out = 0 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | . log creation = 0 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,785 | INFO     | ..............................
[2024-06-28 03:09:12] 2024-06-28 01:08:50,862 | INFO     | 
[2024-06-28 03:09:12] 2024-06-28 01:08:50,862 | INFO     | job summary report
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | --------------------------------------------------
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | PanDA job id: 6246092898
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | task id: 40102843
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | errors: (none)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | pilot state: finished 
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | transexitcode: 0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,863 | INFO     | exeerrorcode: 0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | exeerrordiag: 
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | exitcode: 0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | exitmsg: OK
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | cpuconsumptiontime: 60111 s
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | nevents: 400
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | neventsw: 0
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | pid: 801113
[2024-06-28 03:09:12] 2024-06-28 01:08:50,864 | INFO     | pgrp: 801113
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | corecount: 4
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | event service: False
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | sizes: {0: 2385542, 1: 2387089, 4: 2387295, 11: 2387323, 15763: 2418851, 15765: 2427833, 15768: 2428017, 15790: 2428187}
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | --------------------------------------------------
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | 
[2024-06-28 03:09:12] 2024-06-28 01:08:50,865 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-28 03:09:12] 2024-06-28 01:08:50,885 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | job 6246092898 has completed (purged errors)
[2024-06-28 03:09:12] 2024-06-28 01:08:50,887 | INFO     | overall cleanup function is called
[2024-06-28 03:09:12] 2024-06-28 01:08:51,894 | INFO     | --- collectZombieJob: --- 10, [801113]
[2024-06-28 03:09:12] 2024-06-28 01:08:51,895 | INFO     | zombie collector waiting for pid 801113
[2024-06-28 03:09:12] 2024-06-28 01:08:51,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 03:09:12] 2024-06-28 01:08:52,899 | INFO     | collected zombie processes
[2024-06-28 03:09:12] 2024-06-28 01:08:52,900 | INFO     | will now attempt to kill all subprocesses of pid=801113
[2024-06-28 03:09:12] 2024-06-28 01:08:53,000 | INFO     | process IDs to be killed: [801113] (in reverse order)
[2024-06-28 03:09:12] 2024-06-28 01:08:53,075 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 03:09:12] 2024-06-28 01:08:53,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 03:09:12] 2024-06-28 01:08:53,079 | INFO     | did not find any defunct processes belonging to 801113
[2024-06-28 03:09:12] 2024-06-28 01:08:53,082 | INFO     | did not find any defunct processes belonging to 801113
[2024-06-28 03:09:12] 2024-06-28 01:08:53,082 | INFO     | ready for new job
[2024-06-28 03:09:12] 2024-06-28 01:08:53,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 03:09:12] 2024-06-28 01:08:53,084 | INFO     | *************************************
[2024-06-28 03:09:12] 2024-06-28 01:08:53,084 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 03:09:12] 2024-06-28 01:08:53,084 | INFO     | *************************************
[2024-06-28 03:09:12] 2024-06-28 01:08:53,084 | INFO     | 
[2024-06-28 03:09:12] 2024-06-28 01:08:53,085 | INFO     | architecture information:
[2024-06-28 03:09:12] 2024-06-28 01:08:53,086 | INFO     | executing command: cat /etc/os-release
[2024-06-28 03:09:12] 2024-06-28 01:08:53,097 | INFO     | cat /etc/os-release:
[2024-06-28 03:09:12] NAME="CentOS Linux"
[2024-06-28 03:09:12] VERSION="7 (Core)"
[2024-06-28 03:09:12] ID="centos"
[2024-06-28 03:09:12] ID_LIKE="rhel fedora"
[2024-06-28 03:09:12] VERSION_ID="7"
[2024-06-28 03:09:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 03:09:12] ANSI_COLOR="0;31"
[2024-06-28 03:09:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 03:09:12] HOME_URL="https://www.centos.org/"
[2024-06-28 03:09:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 03:09:12] 
[2024-06-28 03:09:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 03:09:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 03:09:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 03:09:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 03:09:12] 
[2024-06-28 03:09:12] 2024-06-28 01:08:53,098 | INFO     | *************************************
[2024-06-28 03:09:12] 2024-06-28 01:08:53,601 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-28 03:09:12] 2024-06-28 01:08:53,619 | INFO     | sufficient remaining disk space (1687786881024 B)
[2024-06-28 03:09:12] 2024-06-28 01:08:53,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 03:09:12] 2024-06-28 01:08:53,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 03:09:12] 2024-06-28 01:08:53,620 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-28 03:09:12] 2024-06-28 01:08:53,621 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 03:09:12] 2024-06-28 01:08:53,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 03:09:12] 2024-06-28 01:08:53,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 03:09:12] 2024-06-28 01:08:53,761 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 03:09:12] 2024-06-28 01:08:54,108 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-28 03:09:12] 2024-06-28 01:08:54,108 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-28 03:09:12] 2024-06-28 01:08:54,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 03:09:12] 2024-06-28 01:08:54,109 | INFO     | will abort loop
[2024-06-28 03:09:12] 2024-06-28 01:08:54,177 | INFO     | all job control threads have been joined
[2024-06-28 03:09:12] 2024-06-28 01:08:54,179 | INFO     | all payload control threads have been joined
[2024-06-28 03:09:12] 2024-06-28 01:08:54,267 | INFO     | all data control threads have been joined
[2024-06-28 03:09:12] 2024-06-28 01:08:54,625 | INFO     | [job] retrieve thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:54,747 | INFO     | [job] validate thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:54,767 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:54,771 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:54,797 | INFO     | [payload] failed_post thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,114 | INFO     | [job] job monitor thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,144 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,156 | INFO     | [data] copytool_in thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,182 | INFO     | [payload] control thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,182 | INFO     | [job] control thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,269 | INFO     | [data] control thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,523 | INFO     | [payload] validate_post thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,766 | INFO     | [data] copytool_out thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:55,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 03:09:12] 2024-06-28 01:08:56,878 | INFO     | [job] queue monitor thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:08:57,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 03:09:12] 2024-06-28 01:09:01,044 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:09:04,179 | INFO     | job.realtimelogging is not enabled
[2024-06-28 03:09:12] 2024-06-28 01:09:05,183 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 03:09:12] 2024-06-28 01:09:07,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47764699231296)>', '<ExcThread(monitor, started 47764956288768)>']
[2024-06-28 03:09:12] 2024-06-28 01:09:07,678 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 03:09:12] 2024-06-28 01:09:07,678 | INFO     | [monitor] control thread has ended
[2024-06-28 03:09:12] 2024-06-28 01:09:12,215 | INFO     | all workflow threads have been joined
[2024-06-28 03:09:12] 2024-06-28 01:09:12,216 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 03:09:12] 2024-06-28 01:09:12,216 | INFO     | traces error code: 0
[2024-06-28 03:09:12] 2024-06-28 01:09:12,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 03:09:12] 2024-06-28 01:09:12,313 [wrapper] ==== pilot stdout END ====
[2024-06-28 03:09:12] 2024-06-28 01:09:12,316 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 03:09:12] 2024-06-28 01:09:12,318 [wrapper] pilotpid: 794113
[2024-06-28 03:09:12] 2024-06-28 01:09:12,320 [wrapper] Pilot exit status: 0
[2024-06-28 03:09:12] 2024-06-28 01:09:12,327 [wrapper] pandaids: 6246092898
[2024-06-28 03:09:12] 2024-06-28 01:09:12,362 [wrapper] cleanup supervisor_pilot 1133679 794114
[2024-06-28 03:09:12] 2024-06-28 01:09:12,364 [wrapper] Test setup, not cleaning
[2024-06-28 03:09:12] 2024-06-28 01:09:12,367 [wrapper] ==== wrapper stdout END ====
[2024-06-28 03:09:12] 2024-06-28 01:09:12,369 [wrapper] ==== wrapper stderr END ====
[2024-06-28 03:09:12] 2024-06-28 01:09:12,373 [wrapper] apfmon messages muted
[2024-06-28 03:09:12]  *** Error codes and diagnostics ***
[2024-06-28 03:09:12]     "exeErrorCode": 0,
[2024-06-28 03:09:12]     "exeErrorDiag": "",
[2024-06-28 03:09:12]     "pilotErrorCode": 0,
[2024-06-28 03:09:12]     "pilotErrorDiag": "",
[2024-06-28 03:09:12]  *** Listing of results directory ***
[2024-06-28 03:09:12] total 561420
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:42 pilot3.tar.gz
[2024-06-28 03:09:12] -rwx------ 1 boinc boinc     32220 Jun 27 14:42 runpilot2-wrapper.sh
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:49 queuedata.json
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc       100 Jun 27 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 03:09:12] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 22:45 run_atlas
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc       105 Jun 27 22:45 job.xml
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc      6456 Jun 27 22:45 init_data.xml
[2024-06-28 03:09:12] -rw-r--r-- 2 boinc boinc 392603055 Jun 27 22:45 EVNT.34668768._000001.pool.root.1
[2024-06-28 03:09:12] -rw-r--r-- 2 boinc boinc     17537 Jun 27 22:45 start_atlas.sh
[2024-06-28 03:09:12] drwxrwx--x 2 boinc boinc      4096 Jun 27 22:45 shared
[2024-06-28 03:09:12] -rw-r--r-- 2 boinc boinc    482498 Jun 27 22:45 input.tar.gz
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc         0 Jun 27 22:45 boinc_lockfile
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc      2626 Jun 27 22:45 pandaJob.out
[2024-06-28 03:09:12] -rw------- 1 boinc boinc       424 Jun 27 22:45 setup.sh.local
[2024-06-28 03:09:12] -rw------- 1 boinc boinc   1036884 Jun 27 22:45 agis_schedconf.cvmfs.json
[2024-06-28 03:09:12] -rw------- 1 boinc boinc   1321378 Jun 27 22:45 cric_ddmendpoints.json
[2024-06-28 03:09:12] drwx------ 4 boinc boinc      4096 Jun 27 22:45 pilot3
[2024-06-28 03:09:12] -rw------- 1 boinc boinc 174715258 Jun 28 03:07 HITS.40102843._000007.pool.root.1
[2024-06-28 03:09:12] -rw------- 1 boinc boinc        95 Jun 28 03:08 pilot_heartbeat.json
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc       530 Jun 28 03:08 boinc_task_state.xml
[2024-06-28 03:09:12] -rw------- 1 boinc boinc      1039 Jun 28 03:08 memory_monitor_summary.json
[2024-06-28 03:09:12] -rw------- 1 boinc boinc         0 Jun 28 03:08 agis_ddmendpoints.agis.ALL.json
[2024-06-28 03:09:12] -rw------- 1 boinc boinc    349043 Jun 28 03:08 log.40102843._000007.job.log.tgz.1
[2024-06-28 03:09:12] -rw------- 1 boinc boinc      7745 Jun 28 03:08 heartbeat.json
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc      8192 Jun 28 03:09 boinc_mmap_file
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc        28 Jun 28 03:09 wrapper_checkpoint.txt
[2024-06-28 03:09:12] -rw------- 1 boinc boinc      4603 Jun 28 03:09 pilotlog.txt
[2024-06-28 03:09:12] -rw------- 1 boinc boinc   1663298 Jun 28 03:09 log.40102843._000007.job.log.1
[2024-06-28 03:09:12] -rw------- 1 boinc boinc       357 Jun 28 03:09 output.list
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc       620 Jun 28 03:09 runtime_log
[2024-06-28 03:09:12] -rw------- 1 boinc boinc   2027520 Jun 28 03:09 result.tar.gz
[2024-06-28 03:09:12] -rw------- 1 boinc boinc       658 Jun 28 03:09 sHQLDmvd3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmW0oKDmaqBKUo.diag
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc     11410 Jun 28 03:09 runtime_log.err
[2024-06-28 03:09:12] -rw-r--r-- 1 boinc boinc     21368 Jun 28 03:09 stderr.txt
[2024-06-28 03:09:13] HITS file was successfully produced:
[2024-06-28 03:09:13] -rw------- 1 boinc boinc 174715258 Jun 28 03:07 shared/HITS.pool.root.1
[2024-06-28 03:09:13]  *** Contents of shared directory: ***
[2024-06-28 03:09:13] total 556508
[2024-06-28 03:09:13] -rw-r--r-- 2 boinc boinc 392603055 Jun 27 22:45 ATLAS.root_0
[2024-06-28 03:09:13] -rw-r--r-- 2 boinc boinc     17537 Jun 27 22:45 start_atlas.sh
[2024-06-28 03:09:13] -rw-r--r-- 2 boinc boinc    482498 Jun 27 22:45 input.tar.gz
[2024-06-28 03:09:13] -rw------- 1 boinc boinc 174715258 Jun 28 03:07 HITS.pool.root.1
[2024-06-28 03:09:13] -rw------- 1 boinc boinc   2027520 Jun 28 03:09 result.tar.gz
03:09:14 (790481): run_atlas exited; CPU time 59937.683622
03:09:14 (790481): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN