Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:21:20 (254490): wrapper (7.7.26015): starting
09:21:20 (254490): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 09:21:20] Arguments: --nthreads 12
[2024-06-27 09:21:20] Threads: 12
[2024-06-27 09:21:20] Checking for CVMFS
[2024-06-27 09:21:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 09:21:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 09:21:21] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 09:21:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 09:21:22] 2.10.1.0 2803 231492 164768 134353 2 220 41889536 45568000 4222 130560 0 1339870777 99.767 841507998 18116 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 09:21:22] CVMFS is ok
[2024-06-27 09:21:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 09:21:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 09:21:22] Further information can be found at the LHC@home message board.
[2024-06-27 09:21:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 09:21:22] Checking for apptainer binary...
[2024-06-27 09:21:22] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 09:21:22] Running /usr/bin/apptainer --version
[2024-06-27 09:21:22] apptainer version 1.3.2-1.el7
[2024-06-27 09:21:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 09:21:22] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0137.triumf.lcg
[2024-06-27 09:21:22] apptainer works
[2024-06-27 09:21:22] Set ATHENA_PROC_NUMBER=12
[2024-06-27 09:21:22] Set ATHENA_CORE_NUMBER=12
[2024-06-27 09:21:22] Starting ATLAS job with PandaID=6246091745
[2024-06-27 09:21:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 11:00:30]  *** The last 200 lines of the pilot log: ***
[2024-06-27 11:00:30]  ddmendpoint=NDGF-T1_DATADISK
[2024-06-27 11:00:30]  direct_access_lan=False
[2024-06-27 11:00:30]  direct_access_wan=False
[2024-06-27 11:00:30]  domain=
[2024-06-27 11:00:30]  filesize=388230
[2024-06-27 11:00:30]  filetype=log
[2024-06-27 11:00:30]  guid=bfd82905-ce20-4b0d-a781-895eddae3fe6
[2024-06-27 11:00:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-27 11:00:30]  is_tar=False
[2024-06-27 11:00:30]  lfn=log.40102799._000024.job.log.tgz.1
[2024-06-27 11:00:30]  mtime=0
[2024-06-27 11:00:30]  protocol_id=None
[2024-06-27 11:00:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 11:00:30]  replicas=None
[2024-06-27 11:00:30]  scope=mc23_13p6TeV
[2024-06-27 11:00:30]  status=None
[2024-06-27 11:00:30]  status_code=0
[2024-06-27 11:00:30]  storage_token=
[2024-06-27 11:00:30]  surl=/home/boinc/slots/0/PanDA_Pilot-6246091745/log.40102799._000024.job.log.tgz.1
[2024-06-27 11:00:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/09/log.40102799._000024.job.log.tgz.1
[2024-06-27 11:00:30]  workdir=None
[2024-06-27 11:00:30] ]
[2024-06-27 11:00:30] 2024-06-27 18:00:02,997 | INFO     | transferring file log.40102799._000024.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246091745/log.40102799._000024.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 11:00:30] 2024-06-27 18:00:02,997 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246091745/log.40102799._000024.job.log.tgz.1 /home/boinc/slots/0/log.40102799._000024.job.log.t
[2024-06-27 11:00:30] 2024-06-27 18:00:03,024 | INFO     | adding to output.list: log.40102799._000024.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/09/log.40102799._000024.job.log.tg
[2024-06-27 11:00:30] 2024-06-27 18:00:03,025 | INFO     | summary of transferred files:
[2024-06-27 11:00:30] 2024-06-27 18:00:03,025 | INFO     |  -- lfn=log.40102799._000024.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 11:00:30] 2024-06-27 18:00:03,025 | INFO     | stage-out finished correctly
[2024-06-27 11:00:30] 2024-06-27 18:00:03,076 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 11:00:30] 2024-06-27 18:00:03,169 | INFO     | job 6246091745 has state=finished
[2024-06-27 11:00:30] 2024-06-27 18:00:03,170 | INFO     | preparing for final server update for job 6246091745 in state='finished'
[2024-06-27 11:00:30] 2024-06-27 18:00:03,170 | INFO     | this job has now completed (state=finished)
[2024-06-27 11:00:30] 2024-06-27 18:00:03,171 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 11:00:30] 2024-06-27 18:00:03,171 | INFO     | job 6246091745 has finished - writing final server update
[2024-06-27 11:00:30] 2024-06-27 18:00:03,171 | INFO     | total number of processed events: 400 (read)
[2024-06-27 11:00:30] 2024-06-27 18:00:03,177 | INFO     | executing command: lscpu
[2024-06-27 11:00:30] 2024-06-27 18:00:03,239 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 11:00:30] 2024-06-27 18:00:03,240 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 11:00:30] 2024-06-27 18:00:03,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 11:00:30] 2024-06-27 18:00:06,943 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 11:00:30] 2024-06-27 18:00:06,944 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246091745/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 11:00:30] 2024-06-27 18:00:06,945 | INFO     | extracted standard info from prmon json
[2024-06-27 11:00:30] 2024-06-27 18:00:06,946 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 11:00:30] 2024-06-27 18:00:06,946 | WARNING  | GPU info not found in prmon json
[2024-06-27 11:00:30] 2024-06-27 18:00:06,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 11:00:30] 2024-06-27 18:00:06,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 11:00:30] 2024-06-27 18:00:06,949 | INFO     | fitting pss+swap vs Time
[2024-06-27 11:00:30] 2024-06-27 18:00:06,950 | INFO     | model: linear, x: [1719505629.0, 1719505690.0, 1719505751.0, 1719505812.0, 1719505873.0, 1719505934.0, 1719505995.0, 1719506056.0, 1719506117.0, 1719506178.0, 1719
[2024-06-27 11:00:30] 2024-06-27 18:00:06,950 | INFO     | sum of square deviations: 226037075.95555547
[2024-06-27 11:00:30] 2024-06-27 18:00:06,950 | INFO     | sum of deviations: 37911982588.22221
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | mean x: 1719508343.5777779
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | mean y: 2815411.111111111
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | -- intersect: -288401067475.96674
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | intersect: -288401067475.96674
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | chi2: 2.2373684211572704
[2024-06-27 11:00:30] 2024-06-27 18:00:06,951 | INFO     | -- intersect: -288401067475.96674
[2024-06-27 11:00:30] 2024-06-27 18:00:06,952 | INFO     | current memory leak: 167.72 B/s (using 90 data points, chi2=2.24)
[2024-06-27 11:00:30] 2024-06-27 18:00:06,952 | INFO     | ..............................
[2024-06-27 11:00:30] 2024-06-27 18:00:06,952 | INFO     | . Timing measurements:
[2024-06-27 11:00:30] 2024-06-27 18:00:06,952 | INFO     | . get job = 0 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,952 | INFO     | . initial setup = 2 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | . payload setup = 9 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | . stage-in = 0 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | . payload execution = 5878 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | . stage-out = 0 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | . log creation = 0 s
[2024-06-27 11:00:30] 2024-06-27 18:00:06,953 | INFO     | ..............................
[2024-06-27 11:00:30] 2024-06-27 18:00:07,273 | WARNING  | process 264579 is no longer using CPU - aborting
[2024-06-27 11:00:30] 2024-06-27 18:00:07,273 | INFO     | aborting job monitoring since job object (job id=6246091745) has expired
[2024-06-27 11:00:30] 2024-06-27 18:00:07,307 | INFO     | 
[2024-06-27 11:00:30] 2024-06-27 18:00:07,307 | INFO     | job summary report
[2024-06-27 11:00:30] 2024-06-27 18:00:07,307 | INFO     | --------------------------------------------------
[2024-06-27 11:00:30] 2024-06-27 18:00:07,307 | INFO     | PanDA job id: 6246091745
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | task id: 40102799
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | errors: (none)
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | pilot state: finished 
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | transexitcode: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | exeerrorcode: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | exeerrordiag: 
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | exitcode: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:07,308 | INFO     | exitmsg: OK
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | cpuconsumptiontime: 57874 s
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | nevents: 400
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | neventsw: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | pid: 264579
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | pgrp: 264579
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | corecount: 12
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | event service: False
[2024-06-27 11:00:30] 2024-06-27 18:00:07,309 | INFO     | sizes: {0: 2386091, 1: 2387026, 7: 2387232, 12: 2387260, 5892: 2413895, 5894: 2423033, 5898: 2423147}
[2024-06-27 11:00:30] 2024-06-27 18:00:07,310 | INFO     | --------------------------------------------------
[2024-06-27 11:00:30] 2024-06-27 18:00:07,310 | INFO     | 
[2024-06-27 11:00:30] 2024-06-27 18:00:07,310 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 11:00:30] 2024-06-27 18:00:07,339 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,339 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,340 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,341 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 11:00:30] 2024-06-27 18:00:07,342 | INFO     | job 6246091745 has completed (purged errors)
[2024-06-27 11:00:30] 2024-06-27 18:00:07,342 | INFO     | overall cleanup function is called
[2024-06-27 11:00:30] 2024-06-27 18:00:08,350 | INFO     | --- collectZombieJob: --- 10, [264579]
[2024-06-27 11:00:30] 2024-06-27 18:00:08,350 | INFO     | zombie collector waiting for pid 264579
[2024-06-27 11:00:30] 2024-06-27 18:00:08,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 11:00:30] 2024-06-27 18:00:09,355 | INFO     | collected zombie processes
[2024-06-27 11:00:30] 2024-06-27 18:00:09,356 | INFO     | will now attempt to kill all subprocesses of pid=264579
[2024-06-27 11:00:30] 2024-06-27 18:00:09,585 | INFO     | process IDs to be killed: [264579] (in reverse order)
[2024-06-27 11:00:30] 2024-06-27 18:00:09,651 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 11:00:30] 2024-06-27 18:00:09,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 11:00:30] 2024-06-27 18:00:09,656 | INFO     | did not find any defunct processes belonging to 264579
[2024-06-27 11:00:30] 2024-06-27 18:00:09,660 | INFO     | did not find any defunct processes belonging to 264579
[2024-06-27 11:00:30] 2024-06-27 18:00:09,660 | INFO     | ready for new job
[2024-06-27 11:00:30] 2024-06-27 18:00:09,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 11:00:30] 2024-06-27 18:00:09,662 | INFO     | *************************************
[2024-06-27 11:00:30] 2024-06-27 18:00:09,662 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 11:00:30] 2024-06-27 18:00:09,662 | INFO     | *************************************
[2024-06-27 11:00:30] 2024-06-27 18:00:09,662 | INFO     | 
[2024-06-27 11:00:30] 2024-06-27 18:00:09,664 | INFO     | architecture information:
[2024-06-27 11:00:30] 2024-06-27 18:00:09,665 | INFO     | executing command: cat /etc/os-release
[2024-06-27 11:00:30] 2024-06-27 18:00:09,681 | INFO     | cat /etc/os-release:
[2024-06-27 11:00:30] NAME="CentOS Linux"
[2024-06-27 11:00:30] VERSION="7 (Core)"
[2024-06-27 11:00:30] ID="centos"
[2024-06-27 11:00:30] ID_LIKE="rhel fedora"
[2024-06-27 11:00:30] VERSION_ID="7"
[2024-06-27 11:00:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 11:00:30] ANSI_COLOR="0;31"
[2024-06-27 11:00:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 11:00:30] HOME_URL="https://www.centos.org/"
[2024-06-27 11:00:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 11:00:30] 
[2024-06-27 11:00:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 11:00:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 11:00:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 11:00:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 11:00:30] 
[2024-06-27 11:00:30] 2024-06-27 18:00:09,682 | INFO     | *************************************
[2024-06-27 11:00:30] 2024-06-27 18:00:10,185 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 11:00:30] 2024-06-27 18:00:10,387 | INFO     | sufficient remaining disk space (2118780977152 B)
[2024-06-27 11:00:30] 2024-06-27 18:00:10,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 11:00:30] 2024-06-27 18:00:10,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 11:00:30] 2024-06-27 18:00:10,605 | INFO     | all data control threads have been joined
[2024-06-27 11:00:30] 2024-06-27 18:00:10,616 | INFO     | all payload control threads have been joined
[2024-06-27 11:00:30] 2024-06-27 18:00:10,688 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 11:00:30] 2024-06-27 18:00:10,688 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 11:00:30] 2024-06-27 18:00:10,688 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 11:00:30] 2024-06-27 18:00:10,783 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:00:30] 2024-06-27 18:00:10,783 | INFO     | aborting loop
[2024-06-27 11:00:30] 2024-06-27 18:00:11,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 11:00:30] 2024-06-27 18:00:11,392 | INFO     | [job] retrieve thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:11,483 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:11,611 | INFO     | [data] control thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:11,621 | INFO     | [payload] control thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:11,789 | INFO     | [job] job monitor thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:11,882 | INFO     | all job control threads have been joined
[2024-06-27 11:00:30] 2024-06-27 18:00:12,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:00:30] 2024-06-27 18:00:12,078 | INFO     | [payload] failed_post thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,281 | INFO     | [payload] validate_post thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,374 | INFO     | [job] validate thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,877 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,881 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,882 | INFO     | [data] copytool_in thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:12,886 | INFO     | [job] control thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:13,055 | INFO     | [job] queue monitor thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:13,096 | INFO     | [data] copytool_out thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:13,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 11:00:30] 2024-06-27 18:00:17,683 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:20,937 | INFO     | job.realtimelogging is not enabled
[2024-06-27 11:00:30] 2024-06-27 18:00:21,938 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 11:00:30] 2024-06-27 18:00:23,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210604422976)>', '<ExcThread(monitor, started 140210306262784)>']
[2024-06-27 11:00:30] 2024-06-27 18:00:23,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 11:00:30] 2024-06-27 18:00:23,747 | INFO     | [monitor] control thread has ended
[2024-06-27 11:00:30] 2024-06-27 18:00:28,291 | INFO     | all workflow threads have been joined
[2024-06-27 11:00:30] 2024-06-27 18:00:28,291 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 11:00:30] 2024-06-27 18:00:28,293 | INFO     | traces error code: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:28,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 11:00:30] 2024-06-27 18:00:28,426 [wrapper] ==== pilot stdout END ====
[2024-06-27 11:00:30] 2024-06-27 18:00:28,556 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 11:00:30] 2024-06-27 18:00:28,731 [wrapper] pilotpid: 258141
[2024-06-27 11:00:30] 2024-06-27 18:00:28,790 [wrapper] Pilot exit status: 0
[2024-06-27 11:00:30] 2024-06-27 18:00:28,857 [wrapper] pandaids: 6246091745
[2024-06-27 11:00:30] 2024-06-27 18:00:28,924 [wrapper] cleanup supervisor_pilot  69788 258142
[2024-06-27 11:00:30] 2024-06-27 18:00:29,147 [wrapper] Test setup, not cleaning
[2024-06-27 11:00:30] 2024-06-27 18:00:29,188 [wrapper] ==== wrapper stdout END ====
[2024-06-27 11:00:30] 2024-06-27 18:00:29,216 [wrapper] ==== wrapper stderr END ====
[2024-06-27 11:00:30] 2024-06-27 18:00:29,223 [wrapper] apfmon messages muted
[2024-06-27 11:00:30]  *** Error codes and diagnostics ***
[2024-06-27 11:00:30]     "exeErrorCode": 0,
[2024-06-27 11:00:30]     "exeErrorDiag": "",
[2024-06-27 11:00:30]     "pilotErrorCode": 0,
[2024-06-27 11:00:30]     "pilotErrorDiag": "",
[2024-06-27 11:00:30]  *** Listing of results directory ***
[2024-06-27 11:00:30] total 576380
[2024-06-27 11:00:30] -rwx------ 1 boinc boinc     32220 Jun 27 05:41 runpilot2-wrapper.sh
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:49 queuedata.json
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc       100 Jun 27 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 11:00:30] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 09:21 run_atlas
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc       105 Jun 27 09:21 job.xml
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc 401506785 Jun 27 09:21 EVNT.34668443._000001.pool.root.1
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:21 start_atlas.sh
[2024-06-27 11:00:30] drwxrwx--x 2 boinc boinc      4096 Jun 27 09:21 shared
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc    482505 Jun 27 09:21 input.tar.gz
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc      6628 Jun 27 09:21 init_data.xml
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc         0 Jun 27 09:21 boinc_lockfile
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc      2590 Jun 27 09:21 pandaJob.out
[2024-06-27 11:00:30] -rw------- 1 boinc boinc       424 Jun 27 09:21 setup.sh.local
[2024-06-27 11:00:30] -rw------- 1 boinc boinc   1034827 Jun 27 09:21 agis_schedconf.cvmfs.json
[2024-06-27 11:00:30] -rw------- 1 boinc boinc         0 Jun 27 09:21 agis_ddmendpoints.agis.ALL.json
[2024-06-27 11:00:30] -rw------- 1 boinc boinc   1321363 Jun 27 09:21 cric_ddmendpoints.json
[2024-06-27 11:00:30] drwx------ 4 boinc boinc      4096 Jun 27 09:21 pilot3
[2024-06-27 11:00:30] -rw------- 1 boinc boinc 183330687 Jun 27 10:59 HITS.40102799._000024.pool.root.1
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc       529 Jun 27 10:59 boinc_task_state.xml
[2024-06-27 11:00:30] -rw------- 1 boinc boinc        95 Jun 27 10:59 pilot_heartbeat.json
[2024-06-27 11:00:30] -rw------- 1 boinc boinc      1046 Jun 27 10:59 memory_monitor_summary.json
[2024-06-27 11:00:30] -rw------- 1 boinc boinc    388230 Jun 27 11:00 log.40102799._000024.job.log.tgz.1
[2024-06-27 11:00:30] -rw------- 1 boinc boinc      7743 Jun 27 11:00 heartbeat.json
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc        27 Jun 27 11:00 wrapper_checkpoint.txt
[2024-06-27 11:00:30] -rw------- 1 boinc boinc      4282 Jun 27 11:00 pilotlog.txt
[2024-06-27 11:00:30] -rw------- 1 boinc boinc    527744 Jun 27 11:00 log.40102799._000024.job.log.1
[2024-06-27 11:00:30] -rw------- 1 boinc boinc       357 Jun 27 11:00 output.list
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc       620 Jun 27 11:00 runtime_log
[2024-06-27 11:00:30] -rw------- 1 boinc boinc    931840 Jun 27 11:00 result.tar.gz
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc     11286 Jun 27 11:00 runtime_log.err
[2024-06-27 11:00:30] -rw------- 1 boinc boinc       648 Jun 27 11:00 KeuLDmcc3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmxoKDmyrzWJo.diag
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc      8192 Jun 27 11:00 boinc_mmap_file
[2024-06-27 11:00:30] -rw-r--r-- 1 boinc boinc     21258 Jun 27 11:00 stderr.txt
[2024-06-27 11:00:30] HITS file was successfully produced:
[2024-06-27 11:00:30] -rw------- 1 boinc boinc 183330687 Jun 27 10:59 shared/HITS.pool.root.1
[2024-06-27 11:00:30]  *** Contents of shared directory: ***
[2024-06-27 11:00:30] total 572548
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc 401506785 Jun 27 09:21 ATLAS.root_0
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:21 start_atlas.sh
[2024-06-27 11:00:30] -rw-r--r-- 2 boinc boinc    482505 Jun 27 09:21 input.tar.gz
[2024-06-27 11:00:30] -rw------- 1 boinc boinc 183330687 Jun 27 10:59 HITS.pool.root.1
[2024-06-27 11:00:30] -rw------- 1 boinc boinc    931840 Jun 27 11:00 result.tar.gz
11:00:32 (254490): run_atlas exited; CPU time 57764.850685
11:00:32 (254490): called boinc_finish(0)

</stderr_txt>
]]>

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