Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:34:29 (107254): wrapper (7.7.26015): starting
09:34:29 (107254): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 09:34:29] Arguments: --nthreads 12
[2024-06-27 09:34:29] Threads: 12
[2024-06-27 09:34:29] Checking for CVMFS
[2024-06-27 09:34:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 09:34:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 09:34:30] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 09:34:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 09:34:30] 2.10.1.0 202441 80337 161708 134353 1 509 25916031 45568001 7425 130560 0 316572640 99.752 227633740 22566 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-27 09:34:30] CVMFS is ok
[2024-06-27 09:34:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 09:34:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 09:34:30] Further information can be found at the LHC@home message board.
[2024-06-27 09:34:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 09:34:30] Checking for apptainer binary...
[2024-06-27 09:34:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 09:34:30] Running /usr/bin/apptainer --version
[2024-06-27 09:34:30] apptainer version 1.3.2-1.el7
[2024-06-27 09:34:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 09:34:32] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0132.triumf.lcg
[2024-06-27 09:34:32] apptainer works
[2024-06-27 09:34:32] Set ATHENA_PROC_NUMBER=12
[2024-06-27 09:34:32] Set ATHENA_CORE_NUMBER=12
[2024-06-27 09:34:32] Starting ATLAS job with PandaID=6246090539
[2024-06-27 09:34:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 11:10:58]  *** The last 200 lines of the pilot log: ***
[2024-06-27 11:10:58]  is_tar=False
[2024-06-27 11:10:58]  lfn=log.40102771._000015.job.log.tgz.1
[2024-06-27 11:10:58]  mtime=0
[2024-06-27 11:10:58]  protocol_id=None
[2024-06-27 11:10:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 11:10:58]  replicas=None
[2024-06-27 11:10:58]  scope=mc23_13p6TeV
[2024-06-27 11:10:58]  status=None
[2024-06-27 11:10:58]  status_code=0
[2024-06-27 11:10:58]  storage_token=
[2024-06-27 11:10:58]  surl=/home/boinc/slots/0/PanDA_Pilot-6246090539/log.40102771._000015.job.log.tgz.1
[2024-06-27 11:10:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/46/log.40102771._000015.job.log.tgz.1
[2024-06-27 11:10:58]  workdir=None
[2024-06-27 11:10:58] ]
[2024-06-27 11:10:58] 2024-06-27 18:10:33,632 | INFO     | transferring file log.40102771._000015.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246090539/log.40102771._000015.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 11:10:58] 2024-06-27 18:10:33,632 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246090539/log.40102771._000015.job.log.tgz.1 /home/boinc/slots/0/log.40102771._000015.job.log.t
[2024-06-27 11:10:58] 2024-06-27 18:10:33,655 | INFO     | adding to output.list: log.40102771._000015.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/46/log.40102771._000015.job.log.tg
[2024-06-27 11:10:58] 2024-06-27 18:10:33,656 | INFO     | summary of transferred files:
[2024-06-27 11:10:58] 2024-06-27 18:10:33,656 | INFO     |  -- lfn=log.40102771._000015.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 11:10:58] 2024-06-27 18:10:33,656 | INFO     | stage-out finished correctly
[2024-06-27 11:10:58] 2024-06-27 18:10:34,465 | INFO     | monitor loop #436: job 0:6246090539 is in state 'finished'
[2024-06-27 11:10:58] 2024-06-27 18:10:34,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:10:58] 2024-06-27 18:10:36,800 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 11:10:58] 2024-06-27 18:10:36,968 | INFO     | monitor loop #437: job 0:6246090539 is in state 'finished'
[2024-06-27 11:10:58] 2024-06-27 18:10:36,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:10:58] 2024-06-27 18:10:38,381 | INFO     | job 6246090539 has state=finished
[2024-06-27 11:10:58] 2024-06-27 18:10:38,381 | INFO     | preparing for final server update for job 6246090539 in state='finished'
[2024-06-27 11:10:58] 2024-06-27 18:10:38,381 | INFO     | this job has now completed (state=finished)
[2024-06-27 11:10:58] 2024-06-27 18:10:38,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 11:10:58] 2024-06-27 18:10:38,381 | INFO     | job 6246090539 has finished - writing final server update
[2024-06-27 11:10:58] 2024-06-27 18:10:38,382 | INFO     | total number of processed events: 400 (read)
[2024-06-27 11:10:58] 2024-06-27 18:10:38,386 | INFO     | executing command: lscpu
[2024-06-27 11:10:58] 2024-06-27 18:10:38,435 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 11:10:58] 2024-06-27 18:10:38,436 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 11:10:58] 2024-06-27 18:10:38,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 11:10:58] 2024-06-27 18:10:39,471 | INFO     | monitor loop #438: job 0:6246090539 is in state 'finished'
[2024-06-27 11:10:58] 2024-06-27 18:10:39,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:10:58] 2024-06-27 18:10:41,974 | INFO     | monitor loop #439: job 0:6246090539 is in state 'finished'
[2024-06-27 11:10:58] 2024-06-27 18:10:41,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,894 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 11:10:58] 2024-06-27 18:10:43,894 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246090539/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,895 | INFO     | extracted standard info from prmon json
[2024-06-27 11:10:58] 2024-06-27 18:10:43,895 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 11:10:58] 2024-06-27 18:10:43,895 | WARNING  | GPU info not found in prmon json
[2024-06-27 11:10:58] 2024-06-27 18:10:43,896 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 11:10:58] 2024-06-27 18:10:43,896 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 11:10:58] 2024-06-27 18:10:43,898 | INFO     | fitting pss+swap vs Time
[2024-06-27 11:10:58] 2024-06-27 18:10:43,898 | INFO     | model: linear, x: [1719506480.0, 1719506541.0, 1719506602.0, 1719506663.0, 1719506724.0, 1719506785.0, 1719506846.0, 1719506907.0, 1719506968.0, 1719507029.0, 1719
[2024-06-27 11:10:58] 2024-06-27 18:10:43,898 | INFO     | sum of square deviations: 197269684.3720927
[2024-06-27 11:10:58] 2024-06-27 18:10:43,899 | INFO     | sum of deviations: 37148720420.6279
[2024-06-27 11:10:58] 2024-06-27 18:10:43,899 | INFO     | mean x: 1719509072.7441862
[2024-06-27 11:10:58] 2024-06-27 18:10:43,899 | INFO     | mean y: 2781912.2558139535
[2024-06-27 11:10:58] 2024-06-27 18:10:43,899 | INFO     | -- intersect: -323805521464.0511
[2024-06-27 11:10:58] 2024-06-27 18:10:43,899 | INFO     | intersect: -323805521464.0511
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | chi2: 2.250073903428512
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | -- intersect: -323805521464.0511
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | current memory leak: 188.31 B/s (using 86 data points, chi2=2.25)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | ..............................
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | . Timing measurements:
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | . get job = 0 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,900 | INFO     | . initial setup = 2 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | . payload setup = 29 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | . stage-in = 0 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | . payload execution = 5668 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | . stage-out = 0 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | . log creation = 0 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,901 | INFO     | ..............................
[2024-06-27 11:10:58] 2024-06-27 18:10:43,969 | INFO     | 
[2024-06-27 11:10:58] 2024-06-27 18:10:43,969 | INFO     | job summary report
[2024-06-27 11:10:58] 2024-06-27 18:10:43,969 | INFO     | --------------------------------------------------
[2024-06-27 11:10:58] 2024-06-27 18:10:43,969 | INFO     | PanDA job id: 6246090539
[2024-06-27 11:10:58] 2024-06-27 18:10:43,969 | INFO     | task id: 40102771
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | errors: (none)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | pilot state: finished 
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | transexitcode: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | exeerrorcode: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | exeerrordiag: 
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | exitcode: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:43,970 | INFO     | exitmsg: OK
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | cpuconsumptiontime: 37652 s
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | nevents: 400
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | neventsw: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | pid: 120135
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | pgrp: 120135
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | corecount: 12
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | event service: False
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | sizes: {0: 2387008, 11: 2387008, 13: 2387242, 21: 2387298, 5701: 2413877, 5702: 2422831, 5705: 2423015, 5712: 2423185}
[2024-06-27 11:10:58] 2024-06-27 18:10:43,971 | INFO     | --------------------------------------------------
[2024-06-27 11:10:58] 2024-06-27 18:10:43,972 | INFO     | 
[2024-06-27 11:10:58] 2024-06-27 18:10:43,972 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 11:10:58] 2024-06-27 18:10:43,995 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,996 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,996 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,996 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 11:10:58] 2024-06-27 18:10:43,998 | INFO     | job 6246090539 has completed (purged errors)
[2024-06-27 11:10:58] 2024-06-27 18:10:43,999 | INFO     | overall cleanup function is called
[2024-06-27 11:10:58] 2024-06-27 18:10:45,006 | INFO     | --- collectZombieJob: --- 10, [120135]
[2024-06-27 11:10:58] 2024-06-27 18:10:45,006 | INFO     | zombie collector waiting for pid 120135
[2024-06-27 11:10:58] 2024-06-27 18:10:45,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 11:10:58] 2024-06-27 18:10:46,007 | INFO     | collected zombie processes
[2024-06-27 11:10:58] 2024-06-27 18:10:46,008 | INFO     | will now attempt to kill all subprocesses of pid=120135
[2024-06-27 11:10:58] 2024-06-27 18:10:46,140 | INFO     | process IDs to be killed: [120135] (in reverse order)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,279 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 11:10:58] 2024-06-27 18:10:46,288 | INFO     | did not find any defunct processes belonging to 120135
[2024-06-27 11:10:58] 2024-06-27 18:10:46,293 | INFO     | did not find any defunct processes belonging to 120135
[2024-06-27 11:10:58] 2024-06-27 18:10:46,294 | INFO     | ready for new job
[2024-06-27 11:10:58] 2024-06-27 18:10:46,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 11:10:58] 2024-06-27 18:10:46,295 | INFO     | *************************************
[2024-06-27 11:10:58] 2024-06-27 18:10:46,295 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 11:10:58] 2024-06-27 18:10:46,295 | INFO     | *************************************
[2024-06-27 11:10:58] 2024-06-27 18:10:46,295 | INFO     | 
[2024-06-27 11:10:58] 2024-06-27 18:10:46,298 | INFO     | architecture information:
[2024-06-27 11:10:58] 2024-06-27 18:10:46,298 | INFO     | executing command: cat /etc/os-release
[2024-06-27 11:10:58] 2024-06-27 18:10:46,321 | INFO     | cat /etc/os-release:
[2024-06-27 11:10:58] NAME="CentOS Linux"
[2024-06-27 11:10:58] VERSION="7 (Core)"
[2024-06-27 11:10:58] ID="centos"
[2024-06-27 11:10:58] ID_LIKE="rhel fedora"
[2024-06-27 11:10:58] VERSION_ID="7"
[2024-06-27 11:10:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 11:10:58] ANSI_COLOR="0;31"
[2024-06-27 11:10:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 11:10:58] HOME_URL="https://www.centos.org/"
[2024-06-27 11:10:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 11:10:58] 
[2024-06-27 11:10:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 11:10:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 11:10:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 11:10:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 11:10:58] 
[2024-06-27 11:10:58] 2024-06-27 18:10:46,321 | INFO     | *************************************
[2024-06-27 11:10:58] 2024-06-27 18:10:46,825 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 11:10:58] 2024-06-27 18:10:46,847 | INFO     | sufficient remaining disk space (1879200235520 B)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 11:10:58] 2024-06-27 18:10:46,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,848 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 11:10:58] 2024-06-27 18:10:46,849 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 11:10:58] 2024-06-27 18:10:46,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 11:10:58] 2024-06-27 18:10:46,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 11:10:58] 2024-06-27 18:10:46,983 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 11:10:58] 2024-06-27 18:10:46,984 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 11:10:58] 2024-06-27 18:10:46,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:10:58] 2024-06-27 18:10:46,984 | INFO     | will abort loop
[2024-06-27 11:10:58] 2024-06-27 18:10:47,180 | INFO     | all job control threads have been joined
[2024-06-27 11:10:58] 2024-06-27 18:10:47,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 11:10:58] 2024-06-27 18:10:47,550 | INFO     | all data control threads have been joined
[2024-06-27 11:10:58] 2024-06-27 18:10:47,853 | INFO     | [job] retrieve thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:47,934 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:47,989 | INFO     | [job] job monitor thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:47,990 | INFO     | all payload control threads have been joined
[2024-06-27 11:10:58] 2024-06-27 18:10:48,185 | INFO     | [job] control thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,229 | INFO     | [payload] validate_post thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,261 | INFO     | [job] validate thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,273 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,556 | INFO     | [data] control thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,729 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,835 | INFO     | [payload] failed_post thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,855 | INFO     | [data] copytool_out thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:10:58] 2024-06-27 18:10:48,993 | INFO     | [payload] control thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:48,997 | INFO     | [data] copytool_in thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:49,095 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:49,979 | INFO     | [job] queue monitor thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:51,380 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 11:10:58] 2024-06-27 18:10:52,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816055953216)>', '<ExcThread(monitor, started 139815337060096)>']
[2024-06-27 11:10:58] 2024-06-27 18:10:52,879 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 11:10:58] 2024-06-27 18:10:52,880 | INFO     | [monitor] control thread has ended
[2024-06-27 11:10:58] 2024-06-27 18:10:57,233 | INFO     | all workflow threads have been joined
[2024-06-27 11:10:58] 2024-06-27 18:10:57,234 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 11:10:58] 2024-06-27 18:10:57,234 | INFO     | traces error code: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:57,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 11:10:58] 2024-06-27 18:10:57,324 [wrapper] ==== pilot stdout END ====
[2024-06-27 11:10:58] 2024-06-27 18:10:57,341 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 11:10:58] 2024-06-27 18:10:57,344 [wrapper] pilotpid: 111697
[2024-06-27 11:10:58] 2024-06-27 18:10:57,346 [wrapper] Pilot exit status: 0
[2024-06-27 11:10:58] 2024-06-27 18:10:57,383 [wrapper] pandaids: 6246090539
[2024-06-27 11:10:58] 2024-06-27 18:10:57,446 [wrapper] cleanup supervisor_pilot 132811 111698
[2024-06-27 11:10:58] 2024-06-27 18:10:57,469 [wrapper] Test setup, not cleaning
[2024-06-27 11:10:58] 2024-06-27 18:10:57,473 [wrapper] ==== wrapper stdout END ====
[2024-06-27 11:10:58] 2024-06-27 18:10:57,477 [wrapper] ==== wrapper stderr END ====
[2024-06-27 11:10:58] 2024-06-27 18:10:57,638 [wrapper] apfmon messages muted
[2024-06-27 11:10:58]  *** Error codes and diagnostics ***
[2024-06-27 11:10:58]     "exeErrorCode": 0,
[2024-06-27 11:10:58]     "exeErrorDiag": "",
[2024-06-27 11:10:58]     "pilotErrorCode": 0,
[2024-06-27 11:10:58]     "pilotErrorDiag": "",
[2024-06-27 11:10:58]  *** Listing of results directory ***
[2024-06-27 11:10:58] total 556360
[2024-06-27 11:10:58] -rwx------ 1 boinc boinc     32220 Jun 27 05:41 runpilot2-wrapper.sh
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:49 queuedata.json
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc       100 Jun 27 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 11:10:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 09:34 run_atlas
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc       105 Jun 27 09:34 job.xml
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc 390315020 Jun 27 09:34 EVNT.34668192._000001.pool.root.1
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc      6623 Jun 27 09:34 init_data.xml
[2024-06-27 11:10:58] drwxrwx--x 2 boinc boinc      4096 Jun 27 09:34 shared
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc    482488 Jun 27 09:34 input.tar.gz
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:34 start_atlas.sh
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc         0 Jun 27 09:34 boinc_lockfile
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc      2600 Jun 27 09:34 pandaJob.out
[2024-06-27 11:10:58] -rw------- 1 boinc boinc       424 Jun 27 09:34 setup.sh.local
[2024-06-27 11:10:58] -rw------- 1 boinc boinc   1034827 Jun 27 09:34 agis_schedconf.cvmfs.json
[2024-06-27 11:10:58] -rw------- 1 boinc boinc         0 Jun 27 09:34 agis_ddmendpoints.agis.ALL.json
[2024-06-27 11:10:58] -rw------- 1 boinc boinc   1321363 Jun 27 09:34 cric_ddmendpoints.json
[2024-06-27 11:10:58] drwx------ 4 boinc boinc      4096 Jun 27 09:34 pilot3
[2024-06-27 11:10:58] -rw------- 1 boinc boinc 174090550 Jun 27 11:09 HITS.40102771._000015.pool.root.1
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc       529 Jun 27 11:10 boinc_task_state.xml
[2024-06-27 11:10:58] -rw------- 1 boinc boinc        95 Jun 27 11:10 pilot_heartbeat.json
[2024-06-27 11:10:58] -rw------- 1 boinc boinc      1055 Jun 27 11:10 memory_monitor_summary.json
[2024-06-27 11:10:58] -rw------- 1 boinc boinc    375635 Jun 27 11:10 log.40102771._000015.job.log.tgz.1
[2024-06-27 11:10:58] -rw------- 1 boinc boinc      7760 Jun 27 11:10 heartbeat.json
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc      8192 Jun 27 11:10 boinc_mmap_file
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc        27 Jun 27 11:10 wrapper_checkpoint.txt
[2024-06-27 11:10:58] -rw------- 1 boinc boinc      4519 Jun 27 11:10 pilotlog.txt
[2024-06-27 11:10:58] -rw------- 1 boinc boinc    506196 Jun 27 11:10 log.40102771._000015.job.log.1
[2024-06-27 11:10:58] -rw------- 1 boinc boinc       357 Jun 27 11:10 output.list
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc       620 Jun 27 11:10 runtime_log
[2024-06-27 11:10:58] -rw------- 1 boinc boinc    901120 Jun 27 11:10 result.tar.gz
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc     11286 Jun 27 11:10 runtime_log.err
[2024-06-27 11:10:58] -rw------- 1 boinc boinc       652 Jun 27 11:10 nH1KDm7b3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmF1rKDmERAsbn.diag
[2024-06-27 11:10:58] -rw-r--r-- 1 boinc boinc     21947 Jun 27 11:10 stderr.txt
[2024-06-27 11:10:58] HITS file was successfully produced:
[2024-06-27 11:10:58] -rw------- 1 boinc boinc 174090550 Jun 27 11:09 shared/HITS.pool.root.1
[2024-06-27 11:10:58]  *** Contents of shared directory: ***
[2024-06-27 11:10:58] total 552560
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc 390315020 Jun 27 09:34 ATLAS.root_0
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc    482488 Jun 27 09:34 input.tar.gz
[2024-06-27 11:10:58] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:34 start_atlas.sh
[2024-06-27 11:10:58] -rw------- 1 boinc boinc 174090550 Jun 27 11:09 HITS.pool.root.1
[2024-06-27 11:10:58] -rw------- 1 boinc boinc    901120 Jun 27 11:10 result.tar.gz
11:11:00 (107254): run_atlas exited; CPU time 37529.648344
11:11:00 (107254): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN