Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:32:22 (84194): wrapper (7.7.26015): starting
06:32:22 (84194): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 06:32:22] Arguments: --nthreads 12
[2024-06-27 06:32:22] Threads: 12
[2024-06-27 06:32:22] Checking for CVMFS
[2024-06-27 06:32:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 06:32:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 06:32:23] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 06:32:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 06:32:23] 2.10.1.0 2803 231323 164156 134351 3 63 41401172 45568001 3973 130560 0 1339635399 99.767 841373793 18115 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 06:32:23] CVMFS is ok
[2024-06-27 06:32:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 06:32:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 06:32:23] Further information can be found at the LHC@home message board.
[2024-06-27 06:32:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 06:32:23] Checking for apptainer binary...
[2024-06-27 06:32:23] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 06:32:23] Running /usr/bin/apptainer --version
[2024-06-27 06:32:23] apptainer version 1.3.2-1.el7
[2024-06-27 06:32:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 06:32:25] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0137.triumf.lcg
[2024-06-27 06:32:25] apptainer works
[2024-06-27 06:32:25] Set ATHENA_PROC_NUMBER=12
[2024-06-27 06:32:25] Set ATHENA_CORE_NUMBER=12
[2024-06-27 06:32:25] Starting ATLAS job with PandaID=6246090578
[2024-06-27 06:32:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 07:37:51]  *** The last 200 lines of the pilot log: ***
[2024-06-27 07:37:51]  guid=d76abd88-f96b-401b-8799-3e7b8a6cde0e
[2024-06-27 07:37:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-27 07:37:51]  is_tar=False
[2024-06-27 07:37:51]  lfn=log.40102771._000036.job.log.tgz.1
[2024-06-27 07:37:51]  mtime=0
[2024-06-27 07:37:51]  protocol_id=None
[2024-06-27 07:37:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 07:37:51]  replicas=None
[2024-06-27 07:37:51]  scope=mc23_13p6TeV
[2024-06-27 07:37:51]  status=None
[2024-06-27 07:37:51]  status_code=0
[2024-06-27 07:37:51]  storage_token=
[2024-06-27 07:37:51]  surl=/home/boinc/slots/0/PanDA_Pilot-6246090578/log.40102771._000036.job.log.tgz.1
[2024-06-27 07:37:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/76/log.40102771._000036.job.log.tgz.1
[2024-06-27 07:37:51]  workdir=None
[2024-06-27 07:37:51] ]
[2024-06-27 07:37:51] 2024-06-27 14:37:27,069 | INFO     | transferring file log.40102771._000036.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246090578/log.40102771._000036.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 07:37:51] 2024-06-27 14:37:27,069 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246090578/log.40102771._000036.job.log.tgz.1 /home/boinc/slots/0/log.40102771._000036.job.log.t
[2024-06-27 07:37:51] 2024-06-27 14:37:27,100 | INFO     | adding to output.list: log.40102771._000036.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/76/log.40102771._000036.job.log.tg
[2024-06-27 07:37:51] 2024-06-27 14:37:27,101 | INFO     | summary of transferred files:
[2024-06-27 07:37:51] 2024-06-27 14:37:27,101 | INFO     |  -- lfn=log.40102771._000036.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 07:37:51] 2024-06-27 14:37:27,101 | INFO     | stage-out finished correctly
[2024-06-27 07:37:51] 2024-06-27 14:37:29,263 | INFO     | monitor loop #299: job 0:6246090578 is in state 'finished'
[2024-06-27 07:37:51] 2024-06-27 14:37:29,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 07:37:51] 2024-06-27 14:37:29,624 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 07:37:51] 2024-06-27 14:37:29,714 | INFO     | job 6246090578 has state=finished
[2024-06-27 07:37:51] 2024-06-27 14:37:29,714 | INFO     | preparing for final server update for job 6246090578 in state='finished'
[2024-06-27 07:37:51] 2024-06-27 14:37:29,715 | INFO     | this job has now completed (state=finished)
[2024-06-27 07:37:51] 2024-06-27 14:37:29,715 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 07:37:51] 2024-06-27 14:37:29,716 | INFO     | job 6246090578 has finished - writing final server update
[2024-06-27 07:37:51] 2024-06-27 14:37:29,716 | INFO     | total number of processed events: 400 (read)
[2024-06-27 07:37:51] 2024-06-27 14:37:29,722 | INFO     | executing command: lscpu
[2024-06-27 07:37:51] 2024-06-27 14:37:29,783 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 07:37:51] 2024-06-27 14:37:29,784 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 07:37:51] 2024-06-27 14:37:29,841 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 07:37:51] 2024-06-27 14:37:31,767 | INFO     | monitor loop #300: job 0:6246090578 is in state 'finished'
[2024-06-27 07:37:51] 2024-06-27 14:37:31,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 07:37:51] 2024-06-27 14:37:34,270 | INFO     | monitor loop #301: job 0:6246090578 is in state 'finished'
[2024-06-27 07:37:51] 2024-06-27 14:37:34,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,897 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 07:37:51] 2024-06-27 14:37:35,897 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246090578/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,898 | INFO     | extracted standard info from prmon json
[2024-06-27 07:37:51] 2024-06-27 14:37:35,898 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 07:37:51] 2024-06-27 14:37:35,898 | WARNING  | GPU info not found in prmon json
[2024-06-27 07:37:51] 2024-06-27 14:37:35,899 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 07:37:51] 2024-06-27 14:37:35,899 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | fitting pss+swap vs Time
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | model: linear, x: [1719495483.0, 1719495544.0, 1719495605.0, 1719495666.0, 1719495727.0, 1719495788.0, 1719495849.0, 1719495910.0, 1719495971.0, 1719496032.0, 1719
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | sum of square deviations: 57411009.719298236
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | sum of deviations: 14665237438.526316
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | mean x: 1719497191.0701754
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | mean y: 2578280.3684210526
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | -- intersect: -439230849335.98553
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | intersect: -439230849335.98553
[2024-06-27 07:37:51] 2024-06-27 14:37:35,900 | INFO     | chi2: 2.221877130649258
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | -- intersect: -439230849335.98553
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | current memory leak: 255.44 B/s (using 57 data points, chi2=2.22)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | ..............................
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . Timing measurements:
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . get job = 0 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . initial setup = 2 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . payload setup = 5 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . stage-in = 0 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . payload execution = 3866 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . stage-out = 1 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | . log creation = 0 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,901 | INFO     | ..............................
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | 
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | job summary report
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | --------------------------------------------------
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | PanDA job id: 6246090578
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | task id: 40102771
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | errors: (none)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,954 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | pilot state: finished 
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | transexitcode: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | exeerrorcode: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | exeerrordiag: 
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | exitcode: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | exitmsg: OK
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | cpuconsumptiontime: 34276 s
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | nevents: 400
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | neventsw: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | pid: 96302
[2024-06-27 07:37:51] 2024-06-27 14:37:35,955 | INFO     | pgrp: 96302
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | corecount: 12
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | event service: False
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | sizes: {0: 2386839, 1: 2387038, 5: 2387244, 11: 2387300, 3876: 2413035, 3878: 2421989, 3881: 2422173, 3887: 2422343}
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | --------------------------------------------------
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | 
[2024-06-27 07:37:51] 2024-06-27 14:37:35,956 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 07:37:51] 2024-06-27 14:37:35,988 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,988 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,988 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,988 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | job 6246090578 has completed (purged errors)
[2024-06-27 07:37:51] 2024-06-27 14:37:35,990 | INFO     | overall cleanup function is called
[2024-06-27 07:37:51] 2024-06-27 14:37:36,999 | INFO     | --- collectZombieJob: --- 10, [96302]
[2024-06-27 07:37:51] 2024-06-27 14:37:36,999 | INFO     | zombie collector waiting for pid 96302
[2024-06-27 07:37:51] 2024-06-27 14:37:36,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 07:37:51] 2024-06-27 14:37:38,004 | INFO     | collected zombie processes
[2024-06-27 07:37:51] 2024-06-27 14:37:38,005 | INFO     | will now attempt to kill all subprocesses of pid=96302
[2024-06-27 07:37:51] 2024-06-27 14:37:38,207 | INFO     | process IDs to be killed: [96302] (in reverse order)
[2024-06-27 07:37:51] 2024-06-27 14:37:38,303 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 07:37:51] 2024-06-27 14:37:38,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 07:37:51] 2024-06-27 14:37:38,312 | INFO     | did not find any defunct processes belonging to 96302
[2024-06-27 07:37:51] 2024-06-27 14:37:38,319 | INFO     | did not find any defunct processes belonging to 96302
[2024-06-27 07:37:51] 2024-06-27 14:37:38,319 | INFO     | ready for new job
[2024-06-27 07:37:51] 2024-06-27 14:37:38,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 07:37:51] 2024-06-27 14:37:38,322 | INFO     | *************************************
[2024-06-27 07:37:51] 2024-06-27 14:37:38,322 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 07:37:51] 2024-06-27 14:37:38,322 | INFO     | *************************************
[2024-06-27 07:37:51] 2024-06-27 14:37:38,322 | INFO     | 
[2024-06-27 07:37:51] 2024-06-27 14:37:38,327 | INFO     | architecture information:
[2024-06-27 07:37:51] 2024-06-27 14:37:38,327 | INFO     | executing command: cat /etc/os-release
[2024-06-27 07:37:51] 2024-06-27 14:37:38,356 | INFO     | cat /etc/os-release:
[2024-06-27 07:37:51] NAME="CentOS Linux"
[2024-06-27 07:37:51] VERSION="7 (Core)"
[2024-06-27 07:37:51] ID="centos"
[2024-06-27 07:37:51] ID_LIKE="rhel fedora"
[2024-06-27 07:37:51] VERSION_ID="7"
[2024-06-27 07:37:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 07:37:51] ANSI_COLOR="0;31"
[2024-06-27 07:37:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 07:37:51] HOME_URL="https://www.centos.org/"
[2024-06-27 07:37:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 07:37:51] 
[2024-06-27 07:37:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 07:37:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 07:37:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 07:37:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 07:37:51] 
[2024-06-27 07:37:51] 2024-06-27 14:37:38,357 | INFO     | *************************************
[2024-06-27 07:37:51] 2024-06-27 14:37:38,860 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 07:37:51] 2024-06-27 14:37:38,983 | INFO     | sufficient remaining disk space (2079832670208 B)
[2024-06-27 07:37:51] 2024-06-27 14:37:38,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 07:37:51] 2024-06-27 14:37:38,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 07:37:51] 2024-06-27 14:37:38,985 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 07:37:51] 2024-06-27 14:37:38,985 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 07:37:51] 2024-06-27 14:37:38,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 07:37:51] 2024-06-27 14:37:38,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 07:37:51] 2024-06-27 14:37:39,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 07:37:51] 2024-06-27 14:37:39,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 07:37:51] 2024-06-27 14:37:39,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 07:37:51] 2024-06-27 14:37:39,283 | INFO     | will abort loop
[2024-06-27 07:37:51] 2024-06-27 14:37:39,886 | INFO     | all data control threads have been joined
[2024-06-27 07:37:51] 2024-06-27 14:37:39,990 | INFO     | [job] retrieve thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,047 | INFO     | all job control threads have been joined
[2024-06-27 07:37:51] 2024-06-27 14:37:40,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 07:37:51] 2024-06-27 14:37:40,193 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,212 | INFO     | [job] validate thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,213 | INFO     | [data] copytool_in thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 07:37:51] 2024-06-27 14:37:40,227 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,283 | INFO     | [job] job monitor thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,429 | INFO     | all payload control threads have been joined
[2024-06-27 07:37:51] 2024-06-27 14:37:40,563 | INFO     | [payload] validate_post thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,856 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,892 | INFO     | [data] control thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:40,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 07:37:51] 2024-06-27 14:37:41,052 | INFO     | [job] control thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:41,289 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:41,435 | INFO     | [payload] control thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:41,445 | INFO     | [payload] failed_post thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:41,960 | INFO     | [job] queue monitor thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:42,184 | INFO     | [data] copytool_out thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:44,229 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 07:37:51] 2024-06-27 14:37:44,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622204684096)>', '<ExcThread(monitor, started 140621784278784)>']
[2024-06-27 07:37:51] 2024-06-27 14:37:45,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 07:37:51] 2024-06-27 14:37:45,017 | INFO     | [monitor] control thread has ended
[2024-06-27 07:37:51] 2024-06-27 14:37:49,844 | INFO     | all workflow threads have been joined
[2024-06-27 07:37:51] 2024-06-27 14:37:49,845 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 07:37:51] 2024-06-27 14:37:49,845 | INFO     | traces error code: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:49,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 07:37:51] 2024-06-27 14:37:49,972 [wrapper] ==== pilot stdout END ====
[2024-06-27 07:37:51] 2024-06-27 14:37:49,976 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 07:37:51] 2024-06-27 14:37:50,149 [wrapper] pilotpid: 89864
[2024-06-27 07:37:51] 2024-06-27 14:37:50,155 [wrapper] Pilot exit status: 0
[2024-06-27 07:37:51] 2024-06-27 14:37:50,174 [wrapper] pandaids: 6246090578
[2024-06-27 07:37:51] 2024-06-27 14:37:50,240 [wrapper] cleanup supervisor_pilot 146196 89865
[2024-06-27 07:37:51] 2024-06-27 14:37:50,244 [wrapper] Test setup, not cleaning
[2024-06-27 07:37:51] 2024-06-27 14:37:50,247 [wrapper] ==== wrapper stdout END ====
[2024-06-27 07:37:51] 2024-06-27 14:37:50,250 [wrapper] ==== wrapper stderr END ====
[2024-06-27 07:37:51] 2024-06-27 14:37:50,257 [wrapper] apfmon messages muted
[2024-06-27 07:37:51]  *** Error codes and diagnostics ***
[2024-06-27 07:37:51]     "exeErrorCode": 0,
[2024-06-27 07:37:51]     "exeErrorDiag": "",
[2024-06-27 07:37:51]     "pilotErrorCode": 0,
[2024-06-27 07:37:51]     "pilotErrorDiag": "",
[2024-06-27 07:37:51]  *** Listing of results directory ***
[2024-06-27 07:37:51] total 564656
[2024-06-27 07:37:51] -rwx------ 1 boinc boinc     32220 Jun 27 05:41 runpilot2-wrapper.sh
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:49 queuedata.json
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc       100 Jun 27 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 07:37:51] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 06:32 run_atlas
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc       105 Jun 27 06:32 job.xml
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc 393854375 Jun 27 06:32 EVNT.34668192._000002.pool.root.1
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc      6628 Jun 27 06:32 init_data.xml
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc     17537 Jun 27 06:32 start_atlas.sh
[2024-06-27 07:37:51] drwxrwx--x 2 boinc boinc      4096 Jun 27 06:32 shared
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc    482499 Jun 27 06:32 input.tar.gz
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc         0 Jun 27 06:32 boinc_lockfile
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc      2601 Jun 27 06:32 pandaJob.out
[2024-06-27 07:37:51] -rw------- 1 boinc boinc       424 Jun 27 06:32 setup.sh.local
[2024-06-27 07:37:51] -rw------- 1 boinc boinc   1034827 Jun 27 06:32 agis_schedconf.cvmfs.json
[2024-06-27 07:37:51] -rw------- 1 boinc boinc         0 Jun 27 06:32 agis_ddmendpoints.agis.ALL.json
[2024-06-27 07:37:51] -rw------- 1 boinc boinc   1321363 Jun 27 06:32 cric_ddmendpoints.json
[2024-06-27 07:37:51] drwx------ 4 boinc boinc      4096 Jun 27 06:32 pilot3
[2024-06-27 07:37:51] -rw------- 1 boinc boinc        95 Jun 27 07:36 pilot_heartbeat.json
[2024-06-27 07:37:51] -rw------- 1 boinc boinc 179353034 Jun 27 07:36 HITS.40102771._000036.pool.root.1
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc       529 Jun 27 07:37 boinc_task_state.xml
[2024-06-27 07:37:51] -rw------- 1 boinc boinc      1039 Jun 27 07:37 memory_monitor_summary.json
[2024-06-27 07:37:51] -rw------- 1 boinc boinc    353980 Jun 27 07:37 log.40102771._000036.job.log.tgz.1
[2024-06-27 07:37:51] -rw------- 1 boinc boinc      7755 Jun 27 07:37 heartbeat.json
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc      8192 Jun 27 07:37 boinc_mmap_file
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc        27 Jun 27 07:37 wrapper_checkpoint.txt
[2024-06-27 07:37:51] -rw------- 1 boinc boinc      4519 Jun 27 07:37 pilotlog.txt
[2024-06-27 07:37:51] -rw------- 1 boinc boinc    369805 Jun 27 07:37 log.40102771._000036.job.log.1
[2024-06-27 07:37:51] -rw------- 1 boinc boinc       357 Jun 27 07:37 output.list
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc       620 Jun 27 07:37 runtime_log
[2024-06-27 07:37:51] -rw------- 1 boinc boinc    747520 Jun 27 07:37 result.tar.gz
[2024-06-27 07:37:51] -rw------- 1 boinc boinc       652 Jun 27 07:37 sipNDmTc3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm9woKDmnMCtHn.diag
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc     11286 Jun 27 07:37 runtime_log.err
[2024-06-27 07:37:51] -rw-r--r-- 1 boinc boinc     21821 Jun 27 07:37 stderr.txt
[2024-06-27 07:37:51] HITS file was successfully produced:
[2024-06-27 07:37:51] -rw------- 1 boinc boinc 179353034 Jun 27 07:36 shared/HITS.pool.root.1
[2024-06-27 07:37:51]  *** Contents of shared directory: ***
[2024-06-27 07:37:51] total 561008
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc 393854375 Jun 27 06:32 ATLAS.root_0
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc     17537 Jun 27 06:32 start_atlas.sh
[2024-06-27 07:37:51] -rw-r--r-- 2 boinc boinc    482499 Jun 27 06:32 input.tar.gz
[2024-06-27 07:37:51] -rw------- 1 boinc boinc 179353034 Jun 27 07:36 HITS.pool.root.1
[2024-06-27 07:37:51] -rw------- 1 boinc boinc    747520 Jun 27 07:37 result.tar.gz
07:37:52 (84194): run_atlas exited; CPU time 34197.117506
07:37:52 (84194): called boinc_finish(0)

</stderr_txt>
]]>

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