Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:53:46 (83739): wrapper (7.7.26015): starting
11:53:46 (83739): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 11:53:46] Arguments: --nthreads 12
[2024-06-27 11:53:46] Threads: 12
[2024-06-27 11:53:46] Checking for CVMFS
[2024-06-27 11:53:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 11:53:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 11:53:46] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 11:53:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 11:53:46] 2.10.1.0 168680 242900 166036 134353 0 742 39586507 45568000 7598 130560 0 1532816570 99.763 926008115 17071 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-27 11:53:46] CVMFS is ok
[2024-06-27 11:53:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 11:53:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 11:53:46] Further information can be found at the LHC@home message board.
[2024-06-27 11:53:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 11:53:46] Checking for apptainer binary...
[2024-06-27 11:53:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 11:53:46] Running /usr/bin/apptainer --version
[2024-06-27 11:53:46] apptainer version 1.3.2-1.el7
[2024-06-27 11:53:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 11:53:47] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0058.triumf.lcg
[2024-06-27 11:53:47] apptainer works
[2024-06-27 11:53:47] Set ATHENA_PROC_NUMBER=12
[2024-06-27 11:53:47] Set ATHENA_CORE_NUMBER=12
[2024-06-27 11:53:47] Starting ATLAS job with PandaID=6246090019
[2024-06-27 11:53:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 13:20:23]  *** The last 200 lines of the pilot log: ***
[2024-06-27 13:20:23]  lfn=log.40102759._000014.job.log.tgz.1
[2024-06-27 13:20:23]  mtime=0
[2024-06-27 13:20:23]  protocol_id=None
[2024-06-27 13:20:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 13:20:23]  replicas=None
[2024-06-27 13:20:23]  scope=mc23_13p6TeV
[2024-06-27 13:20:23]  status=None
[2024-06-27 13:20:23]  status_code=0
[2024-06-27 13:20:23]  storage_token=
[2024-06-27 13:20:23]  surl=/home/boinc/slots/0/PanDA_Pilot-6246090019/log.40102759._000014.job.log.tgz.1
[2024-06-27 13:20:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/9d/log.40102759._000014.job.log.tgz.1
[2024-06-27 13:20:23]  workdir=None
[2024-06-27 13:20:23] ]
[2024-06-27 13:20:23] 2024-06-27 20:19:52,071 | INFO     | transferring file log.40102759._000014.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246090019/log.40102759._000014.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 13:20:23] 2024-06-27 20:19:52,071 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246090019/log.40102759._000014.job.log.tgz.1 /home/boinc/slots/0/log.40102759._000014.job.log.t
[2024-06-27 13:20:23] 2024-06-27 20:19:52,095 | INFO     | adding to output.list: log.40102759._000014.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/9d/log.40102759._000014.job.log.tg
[2024-06-27 13:20:23] 2024-06-27 20:19:52,096 | INFO     | summary of transferred files:
[2024-06-27 13:20:23] 2024-06-27 20:19:52,096 | INFO     |  -- lfn=log.40102759._000014.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 13:20:23] 2024-06-27 20:19:52,096 | INFO     | stage-out finished correctly
[2024-06-27 13:20:23] 2024-06-27 20:19:53,428 | INFO     | monitor loop #356: job 0:6246090019 is in state 'finished'
[2024-06-27 13:20:23] 2024-06-27 20:19:53,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:20:23] 2024-06-27 20:19:55,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 13:20:23] 2024-06-27 20:19:55,931 | INFO     | monitor loop #357: job 0:6246090019 is in state 'finished'
[2024-06-27 13:20:23] 2024-06-27 20:19:55,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:20:23] 2024-06-27 20:19:56,768 | INFO     | job 6246090019 has state=finished
[2024-06-27 13:20:23] 2024-06-27 20:19:56,768 | INFO     | preparing for final server update for job 6246090019 in state='finished'
[2024-06-27 13:20:23] 2024-06-27 20:19:56,769 | INFO     | this job has now completed (state=finished)
[2024-06-27 13:20:23] 2024-06-27 20:19:56,769 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 13:20:23] 2024-06-27 20:19:56,769 | INFO     | job 6246090019 has finished - writing final server update
[2024-06-27 13:20:23] 2024-06-27 20:19:56,770 | INFO     | total number of processed events: 400 (read)
[2024-06-27 13:20:23] 2024-06-27 20:19:56,776 | INFO     | executing command: lscpu
[2024-06-27 13:20:23] 2024-06-27 20:19:56,835 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 13:20:23] 2024-06-27 20:19:56,836 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 13:20:23] 2024-06-27 20:19:56,874 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 13:20:23] 2024-06-27 20:19:58,434 | INFO     | monitor loop #358: job 0:6246090019 is in state 'finished'
[2024-06-27 13:20:23] 2024-06-27 20:19:58,434 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:20:23] 2024-06-27 20:20:00,937 | INFO     | monitor loop #359: job 0:6246090019 is in state 'finished'
[2024-06-27 13:20:23] 2024-06-27 20:20:00,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:20:23] 2024-06-27 20:20:02,905 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 13:20:23] 2024-06-27 20:20:02,906 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246090019/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 13:20:23] 2024-06-27 20:20:02,906 | INFO     | extracted standard info from prmon json
[2024-06-27 13:20:23] 2024-06-27 20:20:02,906 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 13:20:23] 2024-06-27 20:20:02,907 | WARNING  | GPU info not found in prmon json
[2024-06-27 13:20:23] 2024-06-27 20:20:02,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 13:20:23] 2024-06-27 20:20:02,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 13:20:23] 2024-06-27 20:20:02,908 | INFO     | fitting pss+swap vs Time
[2024-06-27 13:20:23] 2024-06-27 20:20:02,908 | INFO     | model: linear, x: [1719514768.0, 1719514826.0, 1719514889.0, 1719514949.0, 1719515014.0, 1719515070.0, 1719515132.0, 1719515194.0, 1719515255.0, 1719515317.0, 1719
[2024-06-27 13:20:23] 2024-06-27 20:20:02,908 | INFO     | sum of square deviations: 147002042.8333334
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | sum of deviations: 31766760937.16667
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | mean x: 1719517114.8333333
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | mean y: 2652214.3205128205
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | -- intersect: -371580545280.4761
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | intersect: -371580545280.4761
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | chi2: 2.3468279250405097
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | -- intersect: -371580545280.4761
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | current memory leak: 216.10 B/s (using 78 data points, chi2=2.35)
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | ..............................
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . Timing measurements:
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . get job = 0 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . initial setup = 2 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . payload setup = 4 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . stage-in = 0 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,909 | INFO     | . payload execution = 5132 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,910 | INFO     | . stage-out = 0 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,910 | INFO     | . log creation = 0 s
[2024-06-27 13:20:23] 2024-06-27 20:20:02,910 | INFO     | ..............................
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | 
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | job summary report
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | --------------------------------------------------
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | PanDA job id: 6246090019
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | task id: 40102759
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | errors: (none)
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | pilot state: finished 
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | transexitcode: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | exeerrorcode: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | exeerrordiag: 
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | exitcode: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:03,003 | INFO     | exitmsg: OK
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | cpuconsumptiontime: 26162 s
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | nevents: 400
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | neventsw: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | pid: 99972
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | pgrp: 99972
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | corecount: 12
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | event service: False
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | sizes: {0: 2387008, 3: 2387214, 11: 2387242, 5140: 2413472, 5141: 2422426, 5144: 2422482, 5152: 2422780}
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | --------------------------------------------------
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | 
[2024-06-27 13:20:23] 2024-06-27 20:20:03,004 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | job 6246090019 has completed (purged errors)
[2024-06-27 13:20:23] 2024-06-27 20:20:03,029 | INFO     | overall cleanup function is called
[2024-06-27 13:20:23] 2024-06-27 20:20:04,036 | INFO     | --- collectZombieJob: --- 10, [99972]
[2024-06-27 13:20:23] 2024-06-27 20:20:04,036 | INFO     | zombie collector waiting for pid 99972
[2024-06-27 13:20:23] 2024-06-27 20:20:04,036 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 13:20:23] 2024-06-27 20:20:05,041 | INFO     | collected zombie processes
[2024-06-27 13:20:23] 2024-06-27 20:20:05,041 | INFO     | will now attempt to kill all subprocesses of pid=99972
[2024-06-27 13:20:23] 2024-06-27 20:20:05,116 | INFO     | process IDs to be killed: [99972] (in reverse order)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,172 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 13:20:23] 2024-06-27 20:20:05,177 | INFO     | did not find any defunct processes belonging to 99972
[2024-06-27 13:20:23] 2024-06-27 20:20:05,180 | INFO     | did not find any defunct processes belonging to 99972
[2024-06-27 13:20:23] 2024-06-27 20:20:05,180 | INFO     | ready for new job
[2024-06-27 13:20:23] 2024-06-27 20:20:05,180 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 13:20:23] 2024-06-27 20:20:05,182 | INFO     | *************************************
[2024-06-27 13:20:23] 2024-06-27 20:20:05,182 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 13:20:23] 2024-06-27 20:20:05,182 | INFO     | *************************************
[2024-06-27 13:20:23] 2024-06-27 20:20:05,182 | INFO     | 
[2024-06-27 13:20:23] 2024-06-27 20:20:05,185 | INFO     | architecture information:
[2024-06-27 13:20:23] 2024-06-27 20:20:05,185 | INFO     | executing command: cat /etc/os-release
[2024-06-27 13:20:23] 2024-06-27 20:20:05,197 | INFO     | cat /etc/os-release:
[2024-06-27 13:20:23] NAME="CentOS Linux"
[2024-06-27 13:20:23] VERSION="7 (Core)"
[2024-06-27 13:20:23] ID="centos"
[2024-06-27 13:20:23] ID_LIKE="rhel fedora"
[2024-06-27 13:20:23] VERSION_ID="7"
[2024-06-27 13:20:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 13:20:23] ANSI_COLOR="0;31"
[2024-06-27 13:20:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 13:20:23] HOME_URL="https://www.centos.org/"
[2024-06-27 13:20:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 13:20:23] 
[2024-06-27 13:20:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 13:20:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 13:20:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 13:20:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 13:20:23] 
[2024-06-27 13:20:23] 2024-06-27 20:20:05,197 | INFO     | *************************************
[2024-06-27 13:20:23] 2024-06-27 20:20:05,700 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 13:20:23] 2024-06-27 20:20:05,718 | INFO     | sufficient remaining disk space (2062273216512 B)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 13:20:23] 2024-06-27 20:20:05,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,719 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 13:20:23] 2024-06-27 20:20:05,720 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 13:20:23] 2024-06-27 20:20:05,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 13:20:23] 2024-06-27 20:20:05,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 13:20:23] 2024-06-27 20:20:05,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 13:20:23] 2024-06-27 20:20:05,947 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 13:20:23] 2024-06-27 20:20:05,947 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 13:20:23] 2024-06-27 20:20:05,947 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:20:23] 2024-06-27 20:20:05,947 | INFO     | will abort loop
[2024-06-27 13:20:23] 2024-06-27 20:20:06,375 | INFO     | all data control threads have been joined
[2024-06-27 13:20:23] 2024-06-27 20:20:06,508 | INFO     | all payload control threads have been joined
[2024-06-27 13:20:23] 2024-06-27 20:20:06,724 | INFO     | [job] retrieve thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:06,784 | INFO     | [payload] validate_post thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:06,836 | INFO     | [payload] failed_post thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:06,950 | INFO     | [job] job monitor thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,077 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,332 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,380 | INFO     | all job control threads have been joined
[2024-06-27 13:20:23] 2024-06-27 20:20:07,380 | INFO     | [data] control thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,509 | INFO     | [data] copytool_in thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,514 | INFO     | [payload] control thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,725 | INFO     | [data] copytool_out thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:07,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:20:23] 2024-06-27 20:20:07,992 | INFO     | [job] validate thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:08,165 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:08,385 | INFO     | [job] control thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:08,978 | INFO     | [job] queue monitor thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:09,784 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:15,845 | INFO     | job.realtimelogging is not enabled
[2024-06-27 13:20:23] 2024-06-27 20:20:16,850 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 13:20:23] 2024-06-27 20:20:17,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140318353753920)>', '<ExcThread(monitor, started 140317789517568)>']
[2024-06-27 13:20:23] 2024-06-27 20:20:17,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 13:20:23] 2024-06-27 20:20:17,777 | INFO     | [monitor] control thread has ended
[2024-06-27 13:20:23] 2024-06-27 20:20:22,329 | INFO     | all workflow threads have been joined
[2024-06-27 13:20:23] 2024-06-27 20:20:22,329 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 13:20:23] 2024-06-27 20:20:22,329 | INFO     | traces error code: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:22,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 13:20:23] 2024-06-27 20:20:22,419 [wrapper] ==== pilot stdout END ====
[2024-06-27 13:20:23] 2024-06-27 20:20:22,421 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 13:20:23] 2024-06-27 20:20:22,424 [wrapper] pilotpid: 87365
[2024-06-27 13:20:23] 2024-06-27 20:20:22,426 [wrapper] Pilot exit status: 0
[2024-06-27 13:20:23] 2024-06-27 20:20:22,433 [wrapper] pandaids: 6246090019
[2024-06-27 13:20:23] 2024-06-27 20:20:22,488 [wrapper] cleanup supervisor_pilot 221804 87366
[2024-06-27 13:20:23] 2024-06-27 20:20:22,491 [wrapper] Test setup, not cleaning
[2024-06-27 13:20:23] 2024-06-27 20:20:22,494 [wrapper] ==== wrapper stdout END ====
[2024-06-27 13:20:23] 2024-06-27 20:20:22,497 [wrapper] ==== wrapper stderr END ====
[2024-06-27 13:20:23] 2024-06-27 20:20:22,502 [wrapper] apfmon messages muted
[2024-06-27 13:20:23]  *** Error codes and diagnostics ***
[2024-06-27 13:20:23]     "exeErrorCode": 0,
[2024-06-27 13:20:23]     "exeErrorDiag": "",
[2024-06-27 13:20:23]     "pilotErrorCode": 0,
[2024-06-27 13:20:23]     "pilotErrorDiag": "",
[2024-06-27 13:20:23]  *** Listing of results directory ***
[2024-06-27 13:20:23] total 553324
[2024-06-27 13:20:23] -rwx------ 1 boinc boinc     32220 Jun 27 05:41 runpilot2-wrapper.sh
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:49 queuedata.json
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc       100 Jun 27 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 13:20:23] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 11:53 run_atlas
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc       105 Jun 27 11:53 job.xml
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc 393282782 Jun 27 11:53 EVNT.34668092._000001.pool.root.1
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc     17537 Jun 27 11:53 start_atlas.sh
[2024-06-27 13:20:23] drwxrwx--x 2 boinc boinc      4096 Jun 27 11:53 shared
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc    482490 Jun 27 11:53 input.tar.gz
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc      6628 Jun 27 11:53 init_data.xml
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc         0 Jun 27 11:53 boinc_lockfile
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc      2600 Jun 27 11:53 pandaJob.out
[2024-06-27 13:20:23] -rw------- 1 boinc boinc       424 Jun 27 11:53 setup.sh.local
[2024-06-27 13:20:23] -rw------- 1 boinc boinc   1034827 Jun 27 11:53 agis_schedconf.cvmfs.json
[2024-06-27 13:20:23] -rw------- 1 boinc boinc         0 Jun 27 11:53 agis_ddmendpoints.agis.ALL.json
[2024-06-27 13:20:23] -rw------- 1 boinc boinc   1321363 Jun 27 11:53 cric_ddmendpoints.json
[2024-06-27 13:20:23] drwx------ 4 boinc boinc      4096 Jun 27 11:53 pilot3
[2024-06-27 13:20:23] -rw------- 1 boinc boinc 168171366 Jun 27 13:19 HITS.40102759._000014.pool.root.1
[2024-06-27 13:20:23] -rw------- 1 boinc boinc        95 Jun 27 13:19 pilot_heartbeat.json
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc       529 Jun 27 13:19 boinc_task_state.xml
[2024-06-27 13:20:23] -rw------- 1 boinc boinc      1057 Jun 27 13:19 memory_monitor_summary.json
[2024-06-27 13:20:23] -rw------- 1 boinc boinc    366649 Jun 27 13:19 log.40102759._000014.job.log.tgz.1
[2024-06-27 13:20:23] -rw------- 1 boinc boinc      7766 Jun 27 13:20 heartbeat.json
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc        27 Jun 27 13:20 wrapper_checkpoint.txt
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc      8192 Jun 27 13:20 boinc_mmap_file
[2024-06-27 13:20:23] -rw------- 1 boinc boinc      4591 Jun 27 13:20 pilotlog.txt
[2024-06-27 13:20:23] -rw------- 1 boinc boinc    434598 Jun 27 13:20 log.40102759._000014.job.log.1
[2024-06-27 13:20:23] -rw------- 1 boinc boinc       357 Jun 27 13:20 output.list
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc       620 Jun 27 13:20 runtime_log
[2024-06-27 13:20:23] -rw------- 1 boinc boinc    819200 Jun 27 13:20 result.tar.gz
[2024-06-27 13:20:23] -rw------- 1 boinc boinc       653 Jun 27 13:20 w4dKDm5b3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmsvoKDm6WCDkm.diag
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc     11286 Jun 27 13:20 runtime_log.err
[2024-06-27 13:20:23] -rw-r--r-- 1 boinc boinc     21982 Jun 27 13:20 stderr.txt
[2024-06-27 13:20:23] HITS file was successfully produced:
[2024-06-27 13:20:23] -rw------- 1 boinc boinc 168171366 Jun 27 13:19 shared/HITS.pool.root.1
[2024-06-27 13:20:23]  *** Contents of shared directory: ***
[2024-06-27 13:20:23] total 549600
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc 393282782 Jun 27 11:53 ATLAS.root_0
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc     17537 Jun 27 11:53 start_atlas.sh
[2024-06-27 13:20:23] -rw-r--r-- 2 boinc boinc    482490 Jun 27 11:53 input.tar.gz
[2024-06-27 13:20:23] -rw------- 1 boinc boinc 168171366 Jun 27 13:19 HITS.pool.root.1
[2024-06-27 13:20:23] -rw------- 1 boinc boinc    819200 Jun 27 13:20 result.tar.gz
13:20:24 (83739): run_atlas exited; CPU time 26051.603248
13:20:24 (83739): called boinc_finish(0)

</stderr_txt>
]]>

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