Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:10:18 (269990): wrapper (7.7.26015): starting
08:10:18 (269990): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 08:10:18] Arguments: --nthreads 12
[2024-06-27 08:10:18] Threads: 12
[2024-06-27 08:10:18] Checking for CVMFS
[2024-06-27 08:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:10:18] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:10:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:10:18] 2.9.2.0 77876 242677 116696 134353 0 114 41912921 45568001 7118 130560 0 1430308855 99.779 928124638 16977 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 08:10:18] CVMFS is ok
[2024-06-27 08:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:10:18] Further information can be found at the LHC@home message board.
[2024-06-27 08:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:10:18] Checking for apptainer binary...
[2024-06-27 08:10:18] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:10:18] Running /usr/bin/apptainer --version
[2024-06-27 08:10:18] apptainer version 1.3.2-1.el7
[2024-06-27 08:10:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:10:19] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0099.triumf.lcg
[2024-06-27 08:10:19] apptainer works
[2024-06-27 08:10:19] Set ATHENA_PROC_NUMBER=12
[2024-06-27 08:10:19] Set ATHENA_CORE_NUMBER=12
[2024-06-27 08:10:19] Starting ATLAS job with PandaID=6246089313
[2024-06-27 08:10:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 09:11:34]  *** The last 200 lines of the pilot log: ***
[2024-06-27 09:11:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-27 09:11:34]  is_tar=False
[2024-06-27 09:11:34]  lfn=log.40102688._000046.job.log.tgz.1
[2024-06-27 09:11:34]  mtime=0
[2024-06-27 09:11:34]  protocol_id=None
[2024-06-27 09:11:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 09:11:34]  replicas=None
[2024-06-27 09:11:34]  scope=mc23_13p6TeV
[2024-06-27 09:11:34]  status=None
[2024-06-27 09:11:34]  status_code=0
[2024-06-27 09:11:34]  storage_token=
[2024-06-27 09:11:34]  surl=/home/boinc/slots/0/PanDA_Pilot-6246089313/log.40102688._000046.job.log.tgz.1
[2024-06-27 09:11:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/b8/log.40102688._000046.job.log.tgz.1
[2024-06-27 09:11:34]  workdir=None
[2024-06-27 09:11:34] ]
[2024-06-27 09:11:34] 2024-06-27 16:11:02,895 | INFO     | transferring file log.40102688._000046.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246089313/log.40102688._000046.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 09:11:34] 2024-06-27 16:11:02,895 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246089313/log.40102688._000046.job.log.tgz.1 /home/boinc/slots/0/log.40102688._000046.job.log.t
[2024-06-27 09:11:34] 2024-06-27 16:11:02,936 | INFO     | adding to output.list: log.40102688._000046.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/b8/log.40102688._000046.job.log.tg
[2024-06-27 09:11:34] 2024-06-27 16:11:02,937 | INFO     | summary of transferred files:
[2024-06-27 09:11:34] 2024-06-27 16:11:02,938 | INFO     |  -- lfn=log.40102688._000046.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 09:11:34] 2024-06-27 16:11:02,938 | INFO     | stage-out finished correctly
[2024-06-27 09:11:34] 2024-06-27 16:11:03,745 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 09:11:34] 2024-06-27 16:11:04,045 | INFO     | monitor loop #280: job 0:6246089313 is in state 'finished'
[2024-06-27 09:11:34] 2024-06-27 16:11:04,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 09:11:34] 2024-06-27 16:11:04,400 | INFO     | job 6246089313 has state=finished
[2024-06-27 09:11:34] 2024-06-27 16:11:04,400 | INFO     | preparing for final server update for job 6246089313 in state='finished'
[2024-06-27 09:11:34] 2024-06-27 16:11:04,401 | INFO     | this job has now completed (state=finished)
[2024-06-27 09:11:34] 2024-06-27 16:11:04,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 09:11:34] 2024-06-27 16:11:04,402 | INFO     | job 6246089313 has finished - writing final server update
[2024-06-27 09:11:34] 2024-06-27 16:11:04,402 | INFO     | total number of processed events: 400 (read)
[2024-06-27 09:11:34] 2024-06-27 16:11:04,409 | INFO     | executing command: lscpu
[2024-06-27 09:11:34] 2024-06-27 16:11:04,470 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 09:11:34] 2024-06-27 16:11:04,471 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 09:11:34] 2024-06-27 16:11:04,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 09:11:34] 2024-06-27 16:11:06,549 | INFO     | monitor loop #281: job 0:6246089313 is in state 'finished'
[2024-06-27 09:11:34] 2024-06-27 16:11:06,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 09:11:34] 2024-06-27 16:11:09,053 | INFO     | monitor loop #282: job 0:6246089313 is in state 'finished'
[2024-06-27 09:11:34] 2024-06-27 16:11:09,054 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,557 | INFO     | monitor loop #283: job 0:6246089313 is in state 'finished'
[2024-06-27 09:11:34] 2024-06-27 16:11:11,558 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,767 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 09:11:34] 2024-06-27 16:11:11,768 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246089313/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,770 | INFO     | extracted standard info from prmon json
[2024-06-27 09:11:34] 2024-06-27 16:11:11,770 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 09:11:34] 2024-06-27 16:11:11,770 | WARNING  | GPU info not found in prmon json
[2024-06-27 09:11:34] 2024-06-27 16:11:11,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 09:11:34] 2024-06-27 16:11:11,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 09:11:34] 2024-06-27 16:11:11,773 | INFO     | fitting pss+swap vs Time
[2024-06-27 09:11:34] 2024-06-27 16:11:11,773 | INFO     | model: linear, x: [1719501374.0, 1719501435.0, 1719501496.0, 1719501557.0, 1719501618.0, 1719501679.0, 1719501740.0, 1719501801.0, 1719501862.0, 1719501923.0, 1719
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | sum of square deviations: 43582182.980769195
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | sum of deviations: 20445350963.519238
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | mean x: 1719502929.5192308
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | mean y: 2637437.980769231
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | -- intersect: -806653626024.8386
[2024-06-27 09:11:34] 2024-06-27 16:11:11,774 | INFO     | intersect: -806653626024.8386
[2024-06-27 09:11:34] 2024-06-27 16:11:11,775 | INFO     | chi2: 2.014937877063917
[2024-06-27 09:11:34] 2024-06-27 16:11:11,775 | INFO     | -- intersect: -806653626024.8386
[2024-06-27 09:11:34] 2024-06-27 16:11:11,775 | INFO     | current memory leak: 469.12 B/s (using 52 data points, chi2=2.01)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | ..............................
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . Timing measurements:
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . get job = 0 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . initial setup = 2 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . payload setup = 7 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . stage-in = 0 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . payload execution = 3599 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . stage-out = 0 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | . log creation = 0 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,776 | INFO     | ..............................
[2024-06-27 09:11:34] 2024-06-27 16:11:11,830 | INFO     | 
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | job summary report
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | --------------------------------------------------
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | PanDA job id: 6246089313
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | task id: 40102688
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | errors: (none)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 09:11:34] 2024-06-27 16:11:11,831 | INFO     | pilot state: finished 
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | transexitcode: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | exeerrorcode: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | exeerrordiag: 
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | exitcode: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | exitmsg: OK
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | cpuconsumptiontime: 26760 s
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | nevents: 400
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | neventsw: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:11,832 | INFO     | pid: 1939
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | pgrp: 1939
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | corecount: 12
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | event service: False
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | sizes: {0: 2386831, 1: 2387030, 6: 2387236, 11: 2387264, 3610: 2412782, 3611: 2421736, 3612: 2421920, 3620: 2422090}
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | --------------------------------------------------
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | 
[2024-06-27 09:11:34] 2024-06-27 16:11:11,833 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 09:11:34] 2024-06-27 16:11:11,876 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,876 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,876 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,878 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,879 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 09:11:34] 2024-06-27 16:11:11,879 | INFO     | job 6246089313 has completed (purged errors)
[2024-06-27 09:11:34] 2024-06-27 16:11:11,879 | INFO     | overall cleanup function is called
[2024-06-27 09:11:34] 2024-06-27 16:11:12,889 | INFO     | --- collectZombieJob: --- 10, [1939]
[2024-06-27 09:11:34] 2024-06-27 16:11:12,889 | INFO     | zombie collector waiting for pid 1939
[2024-06-27 09:11:34] 2024-06-27 16:11:12,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 09:11:34] 2024-06-27 16:11:13,890 | INFO     | collected zombie processes
[2024-06-27 09:11:34] 2024-06-27 16:11:13,890 | INFO     | will now attempt to kill all subprocesses of pid=1939
[2024-06-27 09:11:34] 2024-06-27 16:11:13,999 | INFO     | process IDs to be killed: [1939] (in reverse order)
[2024-06-27 09:11:34] 2024-06-27 16:11:14,087 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 09:11:34] 2024-06-27 16:11:14,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 09:11:34] 2024-06-27 16:11:14,096 | INFO     | did not find any defunct processes belonging to 1939
[2024-06-27 09:11:34] 2024-06-27 16:11:14,100 | INFO     | did not find any defunct processes belonging to 1939
[2024-06-27 09:11:34] 2024-06-27 16:11:14,100 | INFO     | ready for new job
[2024-06-27 09:11:34] 2024-06-27 16:11:14,100 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 09:11:34] 2024-06-27 16:11:14,101 | INFO     | *************************************
[2024-06-27 09:11:34] 2024-06-27 16:11:14,101 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 09:11:34] 2024-06-27 16:11:14,101 | INFO     | *************************************
[2024-06-27 09:11:34] 2024-06-27 16:11:14,102 | INFO     | 
[2024-06-27 09:11:34] 2024-06-27 16:11:14,104 | INFO     | architecture information:
[2024-06-27 09:11:34] 2024-06-27 16:11:14,104 | INFO     | executing command: cat /etc/os-release
[2024-06-27 09:11:34] 2024-06-27 16:11:14,139 | INFO     | cat /etc/os-release:
[2024-06-27 09:11:34] NAME="CentOS Linux"
[2024-06-27 09:11:34] VERSION="7 (Core)"
[2024-06-27 09:11:34] ID="centos"
[2024-06-27 09:11:34] ID_LIKE="rhel fedora"
[2024-06-27 09:11:34] VERSION_ID="7"
[2024-06-27 09:11:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 09:11:34] ANSI_COLOR="0;31"
[2024-06-27 09:11:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 09:11:34] HOME_URL="https://www.centos.org/"
[2024-06-27 09:11:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 09:11:34] 
[2024-06-27 09:11:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 09:11:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 09:11:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 09:11:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 09:11:34] 
[2024-06-27 09:11:34] 2024-06-27 16:11:14,140 | INFO     | *************************************
[2024-06-27 09:11:34] 2024-06-27 16:11:14,643 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 09:11:34] 2024-06-27 16:11:14,677 | INFO     | sufficient remaining disk space (2086662045696 B)
[2024-06-27 09:11:34] 2024-06-27 16:11:14,678 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 09:11:34] 2024-06-27 16:11:14,679 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 09:11:34] 2024-06-27 16:11:14,679 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 09:11:34] 2024-06-27 16:11:14,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 09:11:34] 2024-06-27 16:11:14,680 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 09:11:34] 2024-06-27 16:11:14,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 09:11:34] 2024-06-27 16:11:14,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 09:11:34] 2024-06-27 16:11:14,803 | INFO     | all job control threads have been joined
[2024-06-27 09:11:34] 2024-06-27 16:11:15,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 09:11:34] 2024-06-27 16:11:15,066 | INFO     | aborting loop
[2024-06-27 09:11:34] 2024-06-27 16:11:15,078 | INFO     | all data control threads have been joined
[2024-06-27 09:11:34] 2024-06-27 16:11:15,679 | INFO     | [job] retrieve thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:15,808 | INFO     | [job] control thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 09:11:34] 2024-06-27 16:11:16,021 | INFO     | [payload] validate_post thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,072 | INFO     | [job] job monitor thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,083 | INFO     | [data] control thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,182 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,183 | INFO     | all payload control threads have been joined
[2024-06-27 09:11:34] 2024-06-27 16:11:16,268 | INFO     | [payload] failed_post thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,523 | INFO     | [job] validate thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,648 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,657 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,661 | INFO     | [data] copytool_in thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:16,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 09:11:34] 2024-06-27 16:11:17,189 | INFO     | [payload] control thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:17,843 | INFO     | [job] queue monitor thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:18,019 | INFO     | [data] copytool_out thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:18,681 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:25,507 | INFO     | job.realtimelogging is not enabled
[2024-06-27 09:11:34] 2024-06-27 16:11:26,513 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 09:11:34] 2024-06-27 16:11:27,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587689252672)>', '<ExcThread(monitor, started 140587382576896)>']
[2024-06-27 09:11:34] 2024-06-27 16:11:28,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 09:11:34] 2024-06-27 16:11:28,728 | INFO     | [monitor] control thread has ended
[2024-06-27 09:11:34] 2024-06-27 16:11:32,954 | INFO     | all workflow threads have been joined
[2024-06-27 09:11:34] 2024-06-27 16:11:32,971 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 09:11:34] 2024-06-27 16:11:32,972 | INFO     | traces error code: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:32,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 09:11:34] 2024-06-27 16:11:33,093 [wrapper] ==== pilot stdout END ====
[2024-06-27 09:11:34] 2024-06-27 16:11:33,098 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 09:11:34] 2024-06-27 16:11:33,103 [wrapper] pilotpid: 273631
[2024-06-27 09:11:34] 2024-06-27 16:11:33,107 [wrapper] Pilot exit status: 0
[2024-06-27 09:11:34] 2024-06-27 16:11:33,126 [wrapper] pandaids: 6246089313
[2024-06-27 09:11:34] 2024-06-27 16:11:33,179 [wrapper] cleanup supervisor_pilot  90605 273632
[2024-06-27 09:11:34] 2024-06-27 16:11:33,186 [wrapper] Test setup, not cleaning
[2024-06-27 09:11:34] 2024-06-27 16:11:33,193 [wrapper] ==== wrapper stdout END ====
[2024-06-27 09:11:34] 2024-06-27 16:11:33,201 [wrapper] ==== wrapper stderr END ====
[2024-06-27 09:11:34] 2024-06-27 16:11:33,215 [wrapper] apfmon messages muted
[2024-06-27 09:11:34]  *** Error codes and diagnostics ***
[2024-06-27 09:11:34]     "exeErrorCode": 0,
[2024-06-27 09:11:34]     "exeErrorDiag": "",
[2024-06-27 09:11:34]     "pilotErrorCode": 0,
[2024-06-27 09:11:34]     "pilotErrorDiag": "",
[2024-06-27 09:11:34]  *** Listing of results directory ***
[2024-06-27 09:11:34] total 557268
[2024-06-27 09:11:34] -rwx------ 1 boinc boinc     32220 Jun 27 05:40 runpilot2-wrapper.sh
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:41 queuedata.json
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc       100 Jun 27 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 09:11:34] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 08:10 run_atlas
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc       105 Jun 27 08:10 job.xml
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc 393856107 Jun 27 08:10 EVNT.34667618._000002.pool.root.1
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc      6627 Jun 27 08:10 init_data.xml
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 08:10 start_atlas.sh
[2024-06-27 09:11:34] drwxrwx--x 2 boinc boinc      4096 Jun 27 08:10 shared
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc    482507 Jun 27 08:10 input.tar.gz
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc         0 Jun 27 08:10 boinc_lockfile
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc      2593 Jun 27 08:10 pandaJob.out
[2024-06-27 09:11:34] -rw------- 1 boinc boinc       424 Jun 27 08:10 setup.sh.local
[2024-06-27 09:11:34] -rw------- 1 boinc boinc   1034827 Jun 27 08:10 agis_schedconf.cvmfs.json
[2024-06-27 09:11:34] -rw------- 1 boinc boinc         0 Jun 27 08:10 agis_ddmendpoints.agis.ALL.json
[2024-06-27 09:11:34] -rw------- 1 boinc boinc   1321363 Jun 27 08:10 cric_ddmendpoints.json
[2024-06-27 09:11:34] drwx------ 4 boinc boinc      4096 Jun 27 08:10 pilot3
[2024-06-27 09:11:34] -rw------- 1 boinc boinc 171823893 Jun 27 09:10 HITS.40102688._000046.pool.root.1
[2024-06-27 09:11:34] -rw------- 1 boinc boinc        95 Jun 27 09:10 pilot_heartbeat.json
[2024-06-27 09:11:34] -rw------- 1 boinc boinc      1056 Jun 27 09:10 memory_monitor_summary.json
[2024-06-27 09:11:34] -rw------- 1 boinc boinc    363083 Jun 27 09:11 log.40102688._000046.job.log.tgz.1
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc       529 Jun 27 09:11 boinc_task_state.xml
[2024-06-27 09:11:34] -rw------- 1 boinc boinc      7765 Jun 27 09:11 heartbeat.json
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc      8192 Jun 27 09:11 boinc_mmap_file
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc        27 Jun 27 09:11 wrapper_checkpoint.txt
[2024-06-27 09:11:34] -rw------- 1 boinc boinc      4405 Jun 27 09:11 pilotlog.txt
[2024-06-27 09:11:34] -rw------- 1 boinc boinc    344111 Jun 27 09:11 log.40102688._000046.job.log.1
[2024-06-27 09:11:34] -rw------- 1 boinc boinc       357 Jun 27 09:11 output.list
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc       620 Jun 27 09:11 runtime_log
[2024-06-27 09:11:34] -rw------- 1 boinc boinc    727040 Jun 27 09:11 result.tar.gz
[2024-06-27 09:11:34] -rw------- 1 boinc boinc       656 Jun 27 09:11 SGZKDmvb3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmsoKDmK4rlcm.diag
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc     11286 Jun 27 09:11 runtime_log.err
[2024-06-27 09:11:34] -rw-r--r-- 1 boinc boinc     21870 Jun 27 09:11 stderr.txt
[2024-06-27 09:11:34] HITS file was successfully produced:
[2024-06-27 09:11:34] -rw------- 1 boinc boinc 171823893 Jun 27 09:10 shared/HITS.pool.root.1
[2024-06-27 09:11:34]  *** Contents of shared directory: ***
[2024-06-27 09:11:34] total 553636
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc 393856107 Jun 27 08:10 ATLAS.root_0
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc     17537 Jun 27 08:10 start_atlas.sh
[2024-06-27 09:11:34] -rw-r--r-- 2 boinc boinc    482507 Jun 27 08:10 input.tar.gz
[2024-06-27 09:11:34] -rw------- 1 boinc boinc 171823893 Jun 27 09:10 HITS.pool.root.1
[2024-06-27 09:11:34] -rw------- 1 boinc boinc    727040 Jun 27 09:11 result.tar.gz
09:11:36 (269990): run_atlas exited; CPU time 26554.751316
09:11:36 (269990): called boinc_finish(0)

</stderr_txt>
]]>

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