Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
10:13:55 (197074): wrapper (7.7.26015): starting
10:13:55 (197074): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 10:13:55] Arguments: --nthreads 12
[2024-06-27 10:13:55] Threads: 12
[2024-06-27 10:13:55] Checking for CVMFS
[2024-06-27 10:13:55] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 10:13:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 10:13:55] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 10:13:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 10:13:55] 2.9.2.0 77876 242800 130308 134353 1 371 43308462 45568000 3564 130560 0 1430624943 99.779 928506672 16980 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-06-27 10:13:55] CVMFS is ok
[2024-06-27 10:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 10:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 10:13:55] Further information can be found at the LHC@home message board.
[2024-06-27 10:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 10:13:55] Checking for apptainer binary...
[2024-06-27 10:13:55] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 10:13:55] Running /usr/bin/apptainer --version
[2024-06-27 10:13:55] apptainer version 1.3.2-1.el7
[2024-06-27 10:13:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 10:13:56] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0099.triumf.lcg
[2024-06-27 10:13:56] apptainer works
[2024-06-27 10:13:56] Set ATHENA_PROC_NUMBER=12
[2024-06-27 10:13:56] Set ATHENA_CORE_NUMBER=12
[2024-06-27 10:13:56] Starting ATLAS job with PandaID=6246091844
[2024-06-27 10:13:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 11:24:38]  *** The last 200 lines of the pilot log: ***
[2024-06-27 11:24:38]  lfn=log.40102795._000035.job.log.tgz.1
[2024-06-27 11:24:38]  mtime=0
[2024-06-27 11:24:38]  protocol_id=None
[2024-06-27 11:24:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 11:24:38]  replicas=None
[2024-06-27 11:24:38]  scope=mc23_13p6TeV
[2024-06-27 11:24:38]  status=None
[2024-06-27 11:24:38]  status_code=0
[2024-06-27 11:24:38]  storage_token=
[2024-06-27 11:24:38]  surl=/home/boinc/slots/0/PanDA_Pilot-6246091844/log.40102795._000035.job.log.tgz.1
[2024-06-27 11:24:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/c1/log.40102795._000035.job.log.tgz.1
[2024-06-27 11:24:38]  workdir=None
[2024-06-27 11:24:38] ]
[2024-06-27 11:24:38] 2024-06-27 18:24:07,415 | INFO     | transferring file log.40102795._000035.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246091844/log.40102795._000035.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 11:24:38] 2024-06-27 18:24:07,416 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246091844/log.40102795._000035.job.log.tgz.1 /home/boinc/slots/0/log.40102795._000035.job.log.t
[2024-06-27 11:24:38] 2024-06-27 18:24:07,452 | INFO     | adding to output.list: log.40102795._000035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2c/c1/log.40102795._000035.job.log.tg
[2024-06-27 11:24:38] 2024-06-27 18:24:07,454 | INFO     | summary of transferred files:
[2024-06-27 11:24:38] 2024-06-27 18:24:07,454 | INFO     |  -- lfn=log.40102795._000035.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 11:24:38] 2024-06-27 18:24:07,454 | INFO     | stage-out finished correctly
[2024-06-27 11:24:38] 2024-06-27 18:24:07,845 | INFO     | monitor loop #327: job 0:6246091844 is in state 'finished'
[2024-06-27 11:24:38] 2024-06-27 18:24:07,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:24:38] 2024-06-27 18:24:08,466 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 11:24:38] 2024-06-27 18:24:09,970 | INFO     | job 6246091844 has state=finished
[2024-06-27 11:24:38] 2024-06-27 18:24:09,970 | INFO     | preparing for final server update for job 6246091844 in state='finished'
[2024-06-27 11:24:38] 2024-06-27 18:24:09,971 | INFO     | this job has now completed (state=finished)
[2024-06-27 11:24:38] 2024-06-27 18:24:09,971 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 11:24:38] 2024-06-27 18:24:09,971 | INFO     | job 6246091844 has finished - writing final server update
[2024-06-27 11:24:38] 2024-06-27 18:24:09,972 | INFO     | total number of processed events: 400 (read)
[2024-06-27 11:24:38] 2024-06-27 18:24:09,978 | INFO     | executing command: lscpu
[2024-06-27 11:24:38] 2024-06-27 18:24:10,047 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 11:24:38] 2024-06-27 18:24:10,047 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 11:24:38] 2024-06-27 18:24:10,116 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 11:24:38] 2024-06-27 18:24:10,348 | INFO     | monitor loop #328: job 0:6246091844 is in state 'finished'
[2024-06-27 11:24:38] 2024-06-27 18:24:10,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:24:38] 2024-06-27 18:24:12,852 | INFO     | monitor loop #329: job 0:6246091844 is in state 'finished'
[2024-06-27 11:24:38] 2024-06-27 18:24:12,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:24:38] 2024-06-27 18:24:15,355 | INFO     | monitor loop #330: job 0:6246091844 is in state 'finished'
[2024-06-27 11:24:38] 2024-06-27 18:24:15,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,225 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 11:24:38] 2024-06-27 18:24:17,226 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246091844/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,227 | INFO     | extracted standard info from prmon json
[2024-06-27 11:24:38] 2024-06-27 18:24:17,227 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 11:24:38] 2024-06-27 18:24:17,228 | WARNING  | GPU info not found in prmon json
[2024-06-27 11:24:38] 2024-06-27 18:24:17,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 11:24:38] 2024-06-27 18:24:17,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 11:24:38] 2024-06-27 18:24:17,230 | INFO     | fitting pss+swap vs Time
[2024-06-27 11:24:38] 2024-06-27 18:24:17,230 | INFO     | model: linear, x: [1719508793.0, 1719508854.0, 1719508915.0, 1719508976.0, 1719509037.0, 1719509098.0, 1719509159.0, 1719509220.0, 1719509281.0, 1719509342.0, 1719
[2024-06-27 11:24:38] 2024-06-27 18:24:17,230 | INFO     | sum of square deviations: 73882315.5
[2024-06-27 11:24:38] 2024-06-27 18:24:17,230 | INFO     | sum of deviations: 22994073738.500004
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | mean x: 1719510653.5
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | mean y: 2732503.1129032257
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | -- intersect: -535153136572.4215
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | intersect: -535153136572.4215
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | chi2: 2.0804262366492834
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | -- intersect: -535153136572.4215
[2024-06-27 11:24:38] 2024-06-27 18:24:17,231 | INFO     | current memory leak: 311.23 B/s (using 62 data points, chi2=2.08)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | ..............................
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . Timing measurements:
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . get job = 0 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . initial setup = 2 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . payload setup = 9 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . stage-in = 0 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . payload execution = 4163 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . stage-out = 0 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | . log creation = 0 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,232 | INFO     | ..............................
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | 
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | job summary report
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | --------------------------------------------------
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | PanDA job id: 6246091844
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | task id: 40102795
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | errors: (none)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 11:24:38] 2024-06-27 18:24:17,497 | INFO     | pilot state: finished 
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | transexitcode: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | exeerrorcode: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | exeerrordiag: 
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | exitcode: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | exitmsg: OK
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | cpuconsumptiontime: 38107 s
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | nevents: 400
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | neventsw: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | pid: 207169
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | pgrp: 207169
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | corecount: 12
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | event service: False
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | sizes: {0: 2387064, 1: 2387064, 8: 2387298, 11: 2387326, 4177: 2422084, 4178: 2422084, 4187: 2422382}
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | --------------------------------------------------
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | 
[2024-06-27 11:24:38] 2024-06-27 18:24:17,498 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 11:24:38] 2024-06-27 18:24:17,541 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 11:24:38] 2024-06-27 18:24:17,544 | INFO     | job 6246091844 has completed (purged errors)
[2024-06-27 11:24:38] 2024-06-27 18:24:17,545 | INFO     | overall cleanup function is called
[2024-06-27 11:24:38] 2024-06-27 18:24:18,554 | INFO     | --- collectZombieJob: --- 10, [207169]
[2024-06-27 11:24:38] 2024-06-27 18:24:18,555 | INFO     | zombie collector waiting for pid 207169
[2024-06-27 11:24:38] 2024-06-27 18:24:18,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 11:24:38] 2024-06-27 18:24:19,560 | INFO     | collected zombie processes
[2024-06-27 11:24:38] 2024-06-27 18:24:19,561 | INFO     | will now attempt to kill all subprocesses of pid=207169
[2024-06-27 11:24:38] 2024-06-27 18:24:19,662 | INFO     | process IDs to be killed: [207169] (in reverse order)
[2024-06-27 11:24:38] 2024-06-27 18:24:19,749 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 11:24:38] 2024-06-27 18:24:19,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 11:24:38] 2024-06-27 18:24:19,758 | INFO     | did not find any defunct processes belonging to 207169
[2024-06-27 11:24:38] 2024-06-27 18:24:19,762 | INFO     | did not find any defunct processes belonging to 207169
[2024-06-27 11:24:38] 2024-06-27 18:24:19,762 | INFO     | ready for new job
[2024-06-27 11:24:38] 2024-06-27 18:24:19,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 11:24:38] 2024-06-27 18:24:19,763 | INFO     | *************************************
[2024-06-27 11:24:38] 2024-06-27 18:24:19,763 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 11:24:38] 2024-06-27 18:24:19,764 | INFO     | *************************************
[2024-06-27 11:24:38] 2024-06-27 18:24:19,764 | INFO     | 
[2024-06-27 11:24:38] 2024-06-27 18:24:19,766 | INFO     | architecture information:
[2024-06-27 11:24:38] 2024-06-27 18:24:19,767 | INFO     | executing command: cat /etc/os-release
[2024-06-27 11:24:38] 2024-06-27 18:24:19,798 | INFO     | cat /etc/os-release:
[2024-06-27 11:24:38] NAME="CentOS Linux"
[2024-06-27 11:24:38] VERSION="7 (Core)"
[2024-06-27 11:24:38] ID="centos"
[2024-06-27 11:24:38] ID_LIKE="rhel fedora"
[2024-06-27 11:24:38] VERSION_ID="7"
[2024-06-27 11:24:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 11:24:38] ANSI_COLOR="0;31"
[2024-06-27 11:24:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 11:24:38] HOME_URL="https://www.centos.org/"
[2024-06-27 11:24:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 11:24:38] 
[2024-06-27 11:24:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 11:24:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 11:24:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 11:24:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 11:24:38] 
[2024-06-27 11:24:38] 2024-06-27 18:24:19,799 | INFO     | *************************************
[2024-06-27 11:24:38] 2024-06-27 18:24:20,302 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 11:24:38] 2024-06-27 18:24:20,336 | INFO     | sufficient remaining disk space (2085251710976 B)
[2024-06-27 11:24:38] 2024-06-27 18:24:20,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 11:24:38] 2024-06-27 18:24:20,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 11:24:38] 2024-06-27 18:24:20,337 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 11:24:38] 2024-06-27 18:24:20,338 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 11:24:38] 2024-06-27 18:24:20,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 11:24:38] 2024-06-27 18:24:20,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 11:24:38] 2024-06-27 18:24:20,367 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 11:24:38] 2024-06-27 18:24:20,367 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 11:24:38] 2024-06-27 18:24:20,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:24:38] 2024-06-27 18:24:20,368 | INFO     | will abort loop
[2024-06-27 11:24:38] 2024-06-27 18:24:20,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 11:24:38] 2024-06-27 18:24:20,881 | INFO     | all data control threads have been joined
[2024-06-27 11:24:38] 2024-06-27 18:24:21,044 | INFO     | all payload control threads have been joined
[2024-06-27 11:24:38] 2024-06-27 18:24:21,343 | INFO     | [job] retrieve thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:21,373 | INFO     | [job] job monitor thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:21,744 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:21,750 | INFO     | all job control threads have been joined
[2024-06-27 11:24:38] 2024-06-27 18:24:21,767 | INFO     | [job] validate thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:21,886 | INFO     | [data] control thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,049 | INFO     | [payload] control thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,139 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,167 | INFO     | [payload] validate_post thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,296 | INFO     | [data] copytool_in thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:24:38] 2024-06-27 18:24:22,482 | INFO     | [payload] failed_post thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,531 | INFO     | [data] copytool_out thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,711 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:22,751 | INFO     | [job] control thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:23,305 | INFO     | [job] queue monitor thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:23,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 11:24:38] 2024-06-27 18:24:27,541 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:30,760 | INFO     | job.realtimelogging is not enabled
[2024-06-27 11:24:38] 2024-06-27 18:24:31,761 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 11:24:38] 2024-06-27 18:24:32,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440832223040)>', '<ExcThread(monitor, started 140440263194368)>']
[2024-06-27 11:24:38] 2024-06-27 18:24:33,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 11:24:38] 2024-06-27 18:24:33,401 | INFO     | [monitor] control thread has ended
[2024-06-27 11:24:38] 2024-06-27 18:24:37,490 | INFO     | all workflow threads have been joined
[2024-06-27 11:24:38] 2024-06-27 18:24:37,490 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 11:24:38] 2024-06-27 18:24:37,491 | INFO     | traces error code: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:37,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 11:24:38] 2024-06-27 18:24:37,620 [wrapper] ==== pilot stdout END ====
[2024-06-27 11:24:38] 2024-06-27 18:24:37,625 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 11:24:38] 2024-06-27 18:24:37,630 [wrapper] pilotpid: 200748
[2024-06-27 11:24:38] 2024-06-27 18:24:37,635 [wrapper] Pilot exit status: 0
[2024-06-27 11:24:38] 2024-06-27 18:24:37,659 [wrapper] pandaids: 6246091844
[2024-06-27 11:24:38] 2024-06-27 18:24:37,711 [wrapper] cleanup supervisor_pilot 248013 200749
[2024-06-27 11:24:38] 2024-06-27 18:24:37,719 [wrapper] Test setup, not cleaning
[2024-06-27 11:24:38] 2024-06-27 18:24:37,726 [wrapper] ==== wrapper stdout END ====
[2024-06-27 11:24:38] 2024-06-27 18:24:37,735 [wrapper] ==== wrapper stderr END ====
[2024-06-27 11:24:38] 2024-06-27 18:24:37,748 [wrapper] apfmon messages muted
[2024-06-27 11:24:38]  *** Error codes and diagnostics ***
[2024-06-27 11:24:38]     "exeErrorCode": 0,
[2024-06-27 11:24:38]     "exeErrorDiag": "",
[2024-06-27 11:24:38]     "pilotErrorCode": 0,
[2024-06-27 11:24:38]     "pilotErrorDiag": "",
[2024-06-27 11:24:38]  *** Listing of results directory ***
[2024-06-27 11:24:38] total 552252
[2024-06-27 11:24:38] -rwx------ 1 boinc boinc     32220 Jun 27 05:41 runpilot2-wrapper.sh
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:41 queuedata.json
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:42 pilot3.tar.gz
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc       100 Jun 27 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 11:24:38] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 10:13 run_atlas
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc       105 Jun 27 10:13 job.xml
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc      6627 Jun 27 10:13 init_data.xml
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc 391687337 Jun 27 10:13 EVNT.34668409._000002.pool.root.1
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc     17537 Jun 27 10:13 start_atlas.sh
[2024-06-27 11:24:38] drwxrwx--x 2 boinc boinc      4096 Jun 27 10:13 shared
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc    482522 Jun 27 10:13 input.tar.gz
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc         0 Jun 27 10:13 boinc_lockfile
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc      2655 Jun 27 10:13 pandaJob.out
[2024-06-27 11:24:38] -rw------- 1 boinc boinc       424 Jun 27 10:13 setup.sh.local
[2024-06-27 11:24:38] -rw------- 1 boinc boinc   1034827 Jun 27 10:14 agis_schedconf.cvmfs.json
[2024-06-27 11:24:38] -rw------- 1 boinc boinc         0 Jun 27 10:14 agis_ddmendpoints.agis.ALL.json
[2024-06-27 11:24:38] -rw------- 1 boinc boinc   1321363 Jun 27 10:14 cric_ddmendpoints.json
[2024-06-27 11:24:38] drwx------ 4 boinc boinc      4096 Jun 27 10:14 pilot3
[2024-06-27 11:24:38] -rw------- 1 boinc boinc        95 Jun 27 11:23 pilot_heartbeat.json
[2024-06-27 11:24:38] -rw------- 1 boinc boinc 168772816 Jun 27 11:23 HITS.40102795._000035.pool.root.1
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc       529 Jun 27 11:23 boinc_task_state.xml
[2024-06-27 11:24:38] -rw------- 1 boinc boinc      1044 Jun 27 11:24 memory_monitor_summary.json
[2024-06-27 11:24:38] -rw------- 1 boinc boinc    356248 Jun 27 11:24 log.40102795._000035.job.log.tgz.1
[2024-06-27 11:24:38] -rw------- 1 boinc boinc      7752 Jun 27 11:24 heartbeat.json
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc      8192 Jun 27 11:24 boinc_mmap_file
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc        27 Jun 27 11:24 wrapper_checkpoint.txt
[2024-06-27 11:24:38] -rw------- 1 boinc boinc      4591 Jun 27 11:24 pilotlog.txt
[2024-06-27 11:24:38] -rw------- 1 boinc boinc    396940 Jun 27 11:24 log.40102795._000035.job.log.1
[2024-06-27 11:24:38] -rw------- 1 boinc boinc       357 Jun 27 11:24 output.list
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc       620 Jun 27 11:24 runtime_log
[2024-06-27 11:24:38] -rw------- 1 boinc boinc    768000 Jun 27 11:24 result.tar.gz
[2024-06-27 11:24:38] -rw------- 1 boinc boinc       657 Jun 27 11:24 UWIODmcc3g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm6JZKDmXeYNan.diag
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc     11286 Jun 27 11:24 runtime_log.err
[2024-06-27 11:24:38] -rw-r--r-- 1 boinc boinc     21977 Jun 27 11:24 stderr.txt
[2024-06-27 11:24:38] HITS file was successfully produced:
[2024-06-27 11:24:38] -rw------- 1 boinc boinc 168772816 Jun 27 11:23 shared/HITS.pool.root.1
[2024-06-27 11:24:38]  *** Contents of shared directory: ***
[2024-06-27 11:24:38] total 548580
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc 391687337 Jun 27 10:13 ATLAS.root_0
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc     17537 Jun 27 10:13 start_atlas.sh
[2024-06-27 11:24:38] -rw-r--r-- 2 boinc boinc    482522 Jun 27 10:13 input.tar.gz
[2024-06-27 11:24:38] -rw------- 1 boinc boinc 168772816 Jun 27 11:23 HITS.pool.root.1
[2024-06-27 11:24:38] -rw------- 1 boinc boinc    768000 Jun 27 11:24 result.tar.gz
11:24:40 (197074): run_atlas exited; CPU time 37945.370050
11:24:40 (197074): called boinc_finish(0)

</stderr_txt>
]]>

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