Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:16:30 (69536): wrapper (7.7.26015): starting
14:16:30 (69536): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 14:16:30] Arguments: --nthreads 12
[2024-06-27 14:16:30] Threads: 12
[2024-06-27 14:16:30] Checking for CVMFS
[2024-06-27 14:16:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 14:16:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 14:16:30] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 14:16:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 14:16:30] 2.10.1.0 202352 243044 137372 134361 3 59 29819609 45568001 3897 130560 0 1510978343 99.764 919619063 17379 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-06-27 14:16:30] CVMFS is ok
[2024-06-27 14:16:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 14:16:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 14:16:30] Further information can be found at the LHC@home message board.
[2024-06-27 14:16:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 14:16:30] Checking for apptainer binary...
[2024-06-27 14:16:30] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 14:16:30] Running /usr/bin/apptainer --version
[2024-06-27 14:16:30] apptainer version 1.3.2-1.el7
[2024-06-27 14:16:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 14:16:31] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0067.triumf.lcg
[2024-06-27 14:16:31] apptainer works
[2024-06-27 14:16:31] Set ATHENA_PROC_NUMBER=12
[2024-06-27 14:16:31] Set ATHENA_CORE_NUMBER=12
[2024-06-27 14:16:31] Starting ATLAS job with PandaID=6246089931
[2024-06-27 14:16:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 15:11:32]  *** The last 200 lines of the pilot log: ***
[2024-06-27 15:11:32]  mtime=0
[2024-06-27 15:11:32]  protocol_id=None
[2024-06-27 15:11:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 15:11:32]  replicas=None
[2024-06-27 15:11:32]  scope=mc23_13p6TeV
[2024-06-27 15:11:32]  status=None
[2024-06-27 15:11:32]  status_code=0
[2024-06-27 15:11:32]  storage_token=
[2024-06-27 15:11:32]  surl=/home/boinc/slots/0/PanDA_Pilot-6246089931/log.40102720._000020.job.log.tgz.1
[2024-06-27 15:11:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/b4/log.40102720._000020.job.log.tgz.1
[2024-06-27 15:11:32]  workdir=None
[2024-06-27 15:11:32] ]
[2024-06-27 15:11:32] 2024-06-27 22:11:04,184 | INFO     | transferring file log.40102720._000020.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246089931/log.40102720._000020.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 15:11:32] 2024-06-27 22:11:04,185 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246089931/log.40102720._000020.job.log.tgz.1 /home/boinc/slots/0/log.40102720._000020.job.log.t
[2024-06-27 15:11:32] 2024-06-27 22:11:04,662 | INFO     | adding to output.list: log.40102720._000020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/b4/log.40102720._000020.job.log.tg
[2024-06-27 15:11:32] 2024-06-27 22:11:04,662 | INFO     | summary of transferred files:
[2024-06-27 15:11:32] 2024-06-27 22:11:04,662 | INFO     |  -- lfn=log.40102720._000020.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 15:11:32] 2024-06-27 22:11:04,662 | INFO     | stage-out finished correctly
[2024-06-27 15:11:32] 2024-06-27 22:11:05,125 | INFO     | monitor loop #258: job 0:6246089931 is in state 'finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:05,126 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 15:11:32] 2024-06-27 22:11:05,670 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 15:11:32] 2024-06-27 22:11:05,959 | INFO     | job 6246089931 has state=finished
[2024-06-27 15:11:32] 2024-06-27 22:11:05,960 | INFO     | preparing for final server update for job 6246089931 in state='finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:05,960 | INFO     | this job has now completed (state=finished)
[2024-06-27 15:11:32] 2024-06-27 22:11:05,960 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 15:11:32] 2024-06-27 22:11:05,960 | INFO     | job 6246089931 has finished - writing final server update
[2024-06-27 15:11:32] 2024-06-27 22:11:05,961 | INFO     | total number of processed events: 400 (read)
[2024-06-27 15:11:32] 2024-06-27 22:11:05,966 | INFO     | executing command: lscpu
[2024-06-27 15:11:32] 2024-06-27 22:11:06,249 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 15:11:32] 2024-06-27 22:11:06,249 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 15:11:32] 2024-06-27 22:11:06,651 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 15:11:32] 2024-06-27 22:11:07,627 | INFO     | monitor loop #259: job 0:6246089931 is in state 'finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:07,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 15:11:32] 2024-06-27 22:11:10,130 | INFO     | monitor loop #260: job 0:6246089931 is in state 'finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:10,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 15:11:32] 2024-06-27 22:11:12,633 | INFO     | monitor loop #261: job 0:6246089931 is in state 'finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:12,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 15:11:32] 2024-06-27 22:11:15,134 | INFO     | monitor loop #262: job 0:6246089931 is in state 'finished'
[2024-06-27 15:11:32] 2024-06-27 22:11:15,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,291 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 15:11:32] 2024-06-27 22:11:16,291 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246089931/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,292 | INFO     | extracted standard info from prmon json
[2024-06-27 15:11:32] 2024-06-27 22:11:16,292 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 15:11:32] 2024-06-27 22:11:16,292 | WARNING  | GPU info not found in prmon json
[2024-06-27 15:11:32] 2024-06-27 22:11:16,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 15:11:32] 2024-06-27 22:11:16,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 15:11:32] 2024-06-27 22:11:16,293 | INFO     | fitting pss+swap vs Time
[2024-06-27 15:11:32] 2024-06-27 22:11:16,293 | INFO     | model: linear, x: [1719523327.0, 1719523388.0, 1719523449.0, 1719523510.0, 1719523571.0, 1719523632.0, 1719523693.0, 1719523754.0, 1719523815.0, 1719523876.0, 1719
[2024-06-27 15:11:32] 2024-06-27 22:11:16,293 | INFO     | sum of square deviations: 32188611.65957445
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | sum of deviations: 16767664902.59574
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | mean x: 1719524730.0851064
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | mean y: 2474264.85106383
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | -- intersect: -895730922711.8184
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | intersect: -895730922711.8184
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | chi2: 2.344825738873995
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | -- intersect: -895730922711.8184
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | current memory leak: 520.92 B/s (using 47 data points, chi2=2.34)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | ..............................
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | . Timing measurements:
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | . get job = 0 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | . initial setup = 2 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,294 | INFO     | . payload setup = 4 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,295 | INFO     | . stage-in = 0 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,295 | INFO     | . payload execution = 3239 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,295 | INFO     | . stage-out = 1 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,295 | INFO     | . log creation = 0 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,295 | INFO     | ..............................
[2024-06-27 15:11:32] 2024-06-27 22:11:16,487 | INFO     | 
[2024-06-27 15:11:32] 2024-06-27 22:11:16,487 | INFO     | job summary report
[2024-06-27 15:11:32] 2024-06-27 22:11:16,487 | INFO     | --------------------------------------------------
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | PanDA job id: 6246089931
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | task id: 40102720
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | errors: (none)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | pilot state: finished 
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | transexitcode: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | exeerrorcode: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:16,488 | INFO     | exeerrordiag: 
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | exitcode: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | exitmsg: OK
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | cpuconsumptiontime: 25271 s
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | nevents: 400
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | neventsw: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | pid: 79561
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | pgrp: 79561
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | corecount: 12
[2024-06-27 15:11:32] 2024-06-27 22:11:16,489 | INFO     | event service: False
[2024-06-27 15:11:32] 2024-06-27 22:11:16,490 | INFO     | sizes: {0: 2387023, 4: 2387229, 11: 2387257, 3247: 2412804, 3248: 2412803, 3251: 2421813, 3252: 2421997, 3263: 2422167}
[2024-06-27 15:11:32] 2024-06-27 22:11:16,490 | INFO     | --------------------------------------------------
[2024-06-27 15:11:32] 2024-06-27 22:11:16,490 | INFO     | 
[2024-06-27 15:11:32] 2024-06-27 22:11:16,490 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | job 6246089931 has completed (purged errors)
[2024-06-27 15:11:32] 2024-06-27 22:11:16,932 | INFO     | overall cleanup function is called
[2024-06-27 15:11:32] 2024-06-27 22:11:17,940 | INFO     | --- collectZombieJob: --- 10, [79561]
[2024-06-27 15:11:32] 2024-06-27 22:11:17,940 | INFO     | zombie collector waiting for pid 79561
[2024-06-27 15:11:32] 2024-06-27 22:11:17,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 15:11:32] 2024-06-27 22:11:18,945 | INFO     | collected zombie processes
[2024-06-27 15:11:32] 2024-06-27 22:11:18,946 | INFO     | will now attempt to kill all subprocesses of pid=79561
[2024-06-27 15:11:32] 2024-06-27 22:11:19,417 | INFO     | process IDs to be killed: [79561] (in reverse order)
[2024-06-27 15:11:32] 2024-06-27 22:11:19,480 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 15:11:32] 2024-06-27 22:11:19,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 15:11:32] 2024-06-27 22:11:19,484 | INFO     | did not find any defunct processes belonging to 79561
[2024-06-27 15:11:32] 2024-06-27 22:11:19,488 | INFO     | did not find any defunct processes belonging to 79561
[2024-06-27 15:11:32] 2024-06-27 22:11:19,488 | INFO     | ready for new job
[2024-06-27 15:11:32] 2024-06-27 22:11:19,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 15:11:32] 2024-06-27 22:11:19,489 | INFO     | *************************************
[2024-06-27 15:11:32] 2024-06-27 22:11:19,489 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 15:11:32] 2024-06-27 22:11:19,489 | INFO     | *************************************
[2024-06-27 15:11:32] 2024-06-27 22:11:19,489 | INFO     | 
[2024-06-27 15:11:32] 2024-06-27 22:11:19,492 | INFO     | architecture information:
[2024-06-27 15:11:32] 2024-06-27 22:11:19,492 | INFO     | executing command: cat /etc/os-release
[2024-06-27 15:11:32] 2024-06-27 22:11:19,505 | INFO     | cat /etc/os-release:
[2024-06-27 15:11:32] NAME="CentOS Linux"
[2024-06-27 15:11:32] VERSION="7 (Core)"
[2024-06-27 15:11:32] ID="centos"
[2024-06-27 15:11:32] ID_LIKE="rhel fedora"
[2024-06-27 15:11:32] VERSION_ID="7"
[2024-06-27 15:11:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 15:11:32] ANSI_COLOR="0;31"
[2024-06-27 15:11:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 15:11:32] HOME_URL="https://www.centos.org/"
[2024-06-27 15:11:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 15:11:32] 
[2024-06-27 15:11:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 15:11:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 15:11:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 15:11:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 15:11:32] 
[2024-06-27 15:11:32] 2024-06-27 22:11:19,506 | INFO     | *************************************
[2024-06-27 15:11:32] 2024-06-27 22:11:20,009 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 15:11:32] 2024-06-27 22:11:20,035 | INFO     | sufficient remaining disk space (2014975098880 B)
[2024-06-27 15:11:32] 2024-06-27 22:11:20,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 15:11:32] 2024-06-27 22:11:20,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 15:11:32] 2024-06-27 22:11:20,036 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 15:11:32] 2024-06-27 22:11:20,037 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 15:11:32] 2024-06-27 22:11:20,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 15:11:32] 2024-06-27 22:11:20,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 15:11:32] 2024-06-27 22:11:20,086 | INFO     | all data control threads have been joined
[2024-06-27 15:11:32] 2024-06-27 22:11:20,140 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 15:11:32] 2024-06-27 22:11:20,140 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 15:11:32] 2024-06-27 22:11:20,140 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 15:11:32] 2024-06-27 22:11:20,140 | INFO     | will abort loop
[2024-06-27 15:11:32] 2024-06-27 22:11:20,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 15:11:32] 2024-06-27 22:11:20,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 15:11:32] 2024-06-27 22:11:21,042 | INFO     | [job] retrieve thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:21,091 | INFO     | [data] control thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:21,133 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:21,145 | INFO     | [job] job monitor thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:21,238 | INFO     | all job control threads have been joined
[2024-06-27 15:11:32] 2024-06-27 22:11:21,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 15:11:32] 2024-06-27 22:11:21,413 | INFO     | all payload control threads have been joined
[2024-06-27 15:11:32] 2024-06-27 22:11:21,679 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:21,735 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,025 | INFO     | [payload] validate_post thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,229 | INFO     | [data] copytool_out thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,244 | INFO     | [job] control thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,359 | INFO     | [job] queue monitor thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,418 | INFO     | [payload] control thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,438 | INFO     | [job] validate thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,478 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,501 | INFO     | [data] copytool_in thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:22,640 | INFO     | [payload] failed_post thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:24,761 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 15:11:32] 2024-06-27 22:11:26,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186961610560)>', '<ExcThread(monitor, started 140186239358720)>']
[2024-06-27 15:11:32] 2024-06-27 22:11:27,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 15:11:32] 2024-06-27 22:11:27,061 | INFO     | [monitor] control thread has ended
[2024-06-27 15:11:32] 2024-06-27 22:11:31,238 | INFO     | all workflow threads have been joined
[2024-06-27 15:11:32] 2024-06-27 22:11:31,238 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 15:11:32] 2024-06-27 22:11:31,238 | INFO     | traces error code: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:31,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 15:11:32] 2024-06-27 22:11:31,524 [wrapper] ==== pilot stdout END ====
[2024-06-27 15:11:32] 2024-06-27 22:11:31,601 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 15:11:32] 2024-06-27 22:11:31,801 [wrapper] pilotpid: 73177
[2024-06-27 15:11:32] 2024-06-27 22:11:31,901 [wrapper] Pilot exit status: 0
[2024-06-27 15:11:32] 2024-06-27 22:11:32,056 [wrapper] pandaids: 6246089931
[2024-06-27 15:11:32] 2024-06-27 22:11:32,098 [wrapper] cleanup supervisor_pilot 185409 73178
[2024-06-27 15:11:32] 2024-06-27 22:11:32,101 [wrapper] Test setup, not cleaning
[2024-06-27 15:11:32] 2024-06-27 22:11:32,103 [wrapper] ==== wrapper stdout END ====
[2024-06-27 15:11:32] 2024-06-27 22:11:32,105 [wrapper] ==== wrapper stderr END ====
[2024-06-27 15:11:32] 2024-06-27 22:11:32,109 [wrapper] apfmon messages muted
[2024-06-27 15:11:32]  *** Error codes and diagnostics ***
[2024-06-27 15:11:32]     "exeErrorCode": 0,
[2024-06-27 15:11:32]     "exeErrorDiag": "",
[2024-06-27 15:11:32]     "pilotErrorCode": 0,
[2024-06-27 15:11:32]     "pilotErrorDiag": "",
[2024-06-27 15:11:32]  *** Listing of results directory ***
[2024-06-27 15:11:32] total 561716
[2024-06-27 15:11:32] -rwx------ 1 boinc boinc     32220 Jun 27 05:40 runpilot2-wrapper.sh
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:41 pilot3.tar.gz
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:41 queuedata.json
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc       100 Jun 27 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 15:11:32] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 14:16 run_atlas
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc       105 Jun 27 14:16 job.xml
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc      6628 Jun 27 14:16 init_data.xml
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc 396149988 Jun 27 14:16 EVNT.34667785._000001.pool.root.1
[2024-06-27 15:11:32] drwxrwx--x 2 boinc boinc      4096 Jun 27 14:16 shared
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc    482506 Jun 27 14:16 input.tar.gz
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc     17537 Jun 27 14:16 start_atlas.sh
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc         0 Jun 27 14:16 boinc_lockfile
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc      2600 Jun 27 14:16 pandaJob.out
[2024-06-27 15:11:32] -rw------- 1 boinc boinc       424 Jun 27 14:16 setup.sh.local
[2024-06-27 15:11:32] -rw------- 1 boinc boinc   1036884 Jun 27 14:16 agis_schedconf.cvmfs.json
[2024-06-27 15:11:32] -rw------- 1 boinc boinc         0 Jun 27 14:16 agis_ddmendpoints.agis.ALL.json
[2024-06-27 15:11:32] -rw------- 1 boinc boinc   1321378 Jun 27 14:16 cric_ddmendpoints.json
[2024-06-27 15:11:32] drwx------ 4 boinc boinc      4096 Jun 27 14:16 pilot3
[2024-06-27 15:11:32] -rw------- 1 boinc boinc 174139701 Jun 27 15:10 HITS.40102720._000020.pool.root.1
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc       529 Jun 27 15:10 boinc_task_state.xml
[2024-06-27 15:11:32] -rw------- 1 boinc boinc        95 Jun 27 15:10 pilot_heartbeat.json
[2024-06-27 15:11:32] -rw------- 1 boinc boinc      1058 Jun 27 15:10 memory_monitor_summary.json
[2024-06-27 15:11:32] -rw------- 1 boinc boinc    356615 Jun 27 15:11 log.40102720._000020.job.log.tgz.1
[2024-06-27 15:11:32] -rw------- 1 boinc boinc      7763 Jun 27 15:11 heartbeat.json
[2024-06-27 15:11:32] -rw------- 1 boinc boinc      4519 Jun 27 15:11 pilotlog.txt
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc      8192 Jun 27 15:11 boinc_mmap_file
[2024-06-27 15:11:32] -rw------- 1 boinc boinc    322183 Jun 27 15:11 log.40102720._000020.job.log.1
[2024-06-27 15:11:32] -rw------- 1 boinc boinc       357 Jun 27 15:11 output.list
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc       620 Jun 27 15:11 runtime_log
[2024-06-27 15:11:32] -rw------- 1 boinc boinc    696320 Jun 27 15:11 result.tar.gz
[2024-06-27 15:11:32] -rw------- 1 boinc boinc       652 Jun 27 15:11 WF8KDmVb3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmPsoKDm1CYbMm.diag
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc     11286 Jun 27 15:11 runtime_log.err
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc        27 Jun 27 15:11 wrapper_checkpoint.txt
[2024-06-27 15:11:32] -rw-r--r-- 1 boinc boinc     22094 Jun 27 15:11 stderr.txt
[2024-06-27 15:11:32] HITS file was successfully produced:
[2024-06-27 15:11:32] -rw------- 1 boinc boinc 174139701 Jun 27 15:10 shared/HITS.pool.root.1
[2024-06-27 15:11:32]  *** Contents of shared directory: ***
[2024-06-27 15:11:32] total 558108
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc 396149988 Jun 27 14:16 ATLAS.root_0
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc    482506 Jun 27 14:16 input.tar.gz
[2024-06-27 15:11:32] -rw-r--r-- 2 boinc boinc     17537 Jun 27 14:16 start_atlas.sh
[2024-06-27 15:11:32] -rw------- 1 boinc boinc 174139701 Jun 27 15:10 HITS.pool.root.1
[2024-06-27 15:11:32] -rw------- 1 boinc boinc    696320 Jun 27 15:11 result.tar.gz
15:11:34 (69536): run_atlas exited; CPU time 25186.671627
15:11:34 (69536): called boinc_finish(0)

</stderr_txt>
]]>

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