Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:45 (1566911): wrapper (7.7.26015): starting
02:12:45 (1566911): wrapper: running run_atlas (--nthreads 4)
[2024-06-28 02:12:45] Arguments: --nthreads 4
[2024-06-28 02:12:45] Threads: 4
[2024-06-28 02:12:45] Checking for CVMFS
[2024-06-28 02:12:45] No cvmfs_config command found, will try listing directly
[2024-06-28 02:12:45] CVMFS is ok
[2024-06-28 02:12:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-28 02:12:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-28 02:12:45] Further information can be found at the LHC@home message board.
[2024-06-28 02:12:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-28 02:12:45] Checking for apptainer binary...
[2024-06-28 02:12:45] which: no apptainer in ((null))
[2024-06-28 02:12:45] apptainer is not installed, using version from CVMFS
[2024-06-28 02:12:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-28 02:12:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-28 02:12:46] apptainer works
[2024-06-28 02:12:46] Set ATHENA_PROC_NUMBER=4
[2024-06-28 02:12:46] Set ATHENA_CORE_NUMBER=4
[2024-06-28 02:12:46] Starting ATLAS job with PandaID=6246089022
[2024-06-28 02:12:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 04:28:47]  *** The last 200 lines of the pilot log: ***
[2024-06-28 04:28:47] 2024-06-28 02:28:32,808 | INFO     | intersect: -127748943965.49132
[2024-06-28 04:28:47] 2024-06-28 02:28:32,808 | INFO     | chi2: 3.857679335586584
[2024-06-28 04:28:47] 2024-06-28 02:28:32,809 | INFO     | model: linear, x: [1719533597.0, 1719533658.0, 1719533719.0, 1719533780.0, 1719533841.0, 1719533902.0, 1719533963.0, 1719534024.0, 1719534085.0, 1719534146.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,809 | INFO     | sum of square deviations: 650252192.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,810 | INFO     | sum of deviations: 52075667517.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,810 | INFO     | mean x: 1719537470.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,810 | INFO     | mean y: 2236291.3046875
[2024-06-28 04:28:47] 2024-06-28 02:28:32,810 | INFO     | -- intersect: -137707505712.36542
[2024-06-28 04:28:47] 2024-06-28 02:28:32,810 | INFO     | intersect: -137707505712.36542
[2024-06-28 04:28:47] 2024-06-28 02:28:32,811 | INFO     | chi2: 3.848772463666802
[2024-06-28 04:28:47] 2024-06-28 02:28:32,811 | INFO     | current chi2=3.848772463666802 (change=0.23088678827234468 %)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,811 | INFO     | right removable region: 127
[2024-06-28 04:28:47] 2024-06-28 02:28:32,811 | INFO     | model: linear, x: [1719533902.0, 1719533963.0, 1719534024.0, 1719534085.0, 1719534146.0, 1719534207.0, 1719534268.0, 1719534329.0, 1719534390.0, 1719534451.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,812 | INFO     | sum of square deviations: 650252192.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,812 | INFO     | sum of deviations: 26482990790.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,812 | INFO     | mean x: 1719537775.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,813 | INFO     | mean y: 2293491.546875
[2024-06-28 04:28:47] 2024-06-28 02:28:32,813 | INFO     | -- intersect: -70029770424.39235
[2024-06-28 04:28:47] 2024-06-28 02:28:32,813 | INFO     | intersect: -70029770424.39235
[2024-06-28 04:28:47] 2024-06-28 02:28:32,813 | INFO     | chi2: 1.6836441273356477
[2024-06-28 04:28:47] 2024-06-28 02:28:32,813 | INFO     | current chi2=1.6836441273356477 (change=56.35603737707663 %)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,814 | INFO     | model: linear, x: [1719534207.0, 1719534268.0, 1719534329.0, 1719534390.0, 1719534451.0, 1719534512.0, 1719534573.0, 1719534634.0, 1719534695.0, 1719534756.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,814 | INFO     | sum of square deviations: 576985702.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | sum of deviations: 1661385934.9999998
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | mean x: 1719537928.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | mean y: 2345176.5691056913
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | -- intersect: -4948931983.983899
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | intersect: -4948931983.983899
[2024-06-28 04:28:47] 2024-06-28 02:28:32,815 | INFO     | chi2: 0.08918183266986807
[2024-06-28 04:28:47] 2024-06-28 02:28:32,816 | INFO     | current chi2=0.08918183266986807 (change=94.70304732324891 %)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,816 | INFO     | model: linear, x: [1719534512.0, 1719534573.0, 1719534634.0, 1719534695.0, 1719534756.0, 1719534817.0, 1719534878.0, 1719534939.0, 1719535000.0, 1719535061.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,816 | INFO     | sum of square deviations: 509440249.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,817 | INFO     | sum of deviations: -2153567637.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,817 | INFO     | mean x: 1719538080.5
[2024-06-28 04:28:47] 2024-06-28 02:28:32,817 | INFO     | mean y: 2353592.872881356
[2024-06-28 04:28:47] 2024-06-28 02:28:32,817 | INFO     | -- intersect: 7271393613.264261
[2024-06-28 04:28:47] 2024-06-28 02:28:32,817 | INFO     | intersect: 7271393613.264261
[2024-06-28 04:28:47] 2024-06-28 02:28:32,818 | INFO     | chi2: 0.002087326404472827
[2024-06-28 04:28:47] 2024-06-28 02:28:32,818 | INFO     | current chi2=0.002087326404472827 (change=97.65947128245315 %)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,818 | INFO     | model: linear, x: [1719534817.0, 1719534878.0, 1719534939.0, 1719535000.0, 1719535061.0, 1719535122.0, 1719535183.0, 1719535244.0, 1719535305.0, 1719535366.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,818 | INFO     | sum of square deviations: 447383272.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,819 | INFO     | sum of deviations: -2186361267.999999
[2024-06-28 04:28:47] 2024-06-28 02:28:32,819 | INFO     | mean x: 1719538233.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,819 | INFO     | mean y: 2353668.8230088498
[2024-06-28 04:28:47] 2024-06-28 02:28:32,819 | INFO     | -- intersect: 8405734006.826254
[2024-06-28 04:28:47] 2024-06-28 02:28:32,820 | INFO     | intersect: 8405734006.826254
[2024-06-28 04:28:47] 2024-06-28 02:28:32,820 | INFO     | chi2: 0.0017641123028050583
[2024-06-28 04:28:47] 2024-06-28 02:28:32,820 | INFO     | current chi2=0.0017641123028050583 (change=15.484597951483256 %)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,820 | INFO     | left removable region: 40
[2024-06-28 04:28:47] 2024-06-28 02:28:32,820 | INFO     | model: linear, x: [1719536037.0, 1719536098.0, 1719536159.0, 1719536220.0, 1719536281.0, 1719536342.0, 1719536403.0, 1719536464.0, 1719536525.0, 1719536586.0, 1719
[2024-06-28 04:28:47] 2024-06-28 02:28:32,821 | INFO     | sum of square deviations: 204163828.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,821 | INFO     | sum of deviations: -1317681740.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,821 | INFO     | mean x: 1719538660.0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,821 | INFO     | mean y: 2351676.3103448274
[2024-06-28 04:28:47] 2024-06-28 02:28:32,821 | INFO     | -- intersect: 11100324885.874521
[2024-06-28 04:28:47] 2024-06-28 02:28:32,822 | INFO     | intersect: 11100324885.874521
[2024-06-28 04:28:47] 2024-06-28 02:28:32,822 | INFO     | chi2: 0.0014879342379740712
[2024-06-28 04:28:47] 2024-06-28 02:28:32,822 | INFO     | -- intersect: 11100324885.874521
[2024-06-28 04:28:47] 2024-06-28 02:28:32,822 | INFO     | current memory leak: -6.45 B/s (using 87 data points, chi2=0.00)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | ..............................
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . Timing measurements:
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . get job = 0 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . initial setup = 1 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . payload setup = 5 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . stage-in = 0 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . payload execution = 8107 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,823 | INFO     | . stage-out = 0 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,824 | INFO     | . log creation = 0 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,824 | INFO     | ..............................
[2024-06-28 04:28:47] 2024-06-28 02:28:32,904 | INFO     | 
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | job summary report
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | --------------------------------------------------
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | PanDA job id: 6246089022
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | task id: 40102679
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | errors: (none)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | pilot state: finished 
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | transexitcode: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,905 | INFO     | exeerrorcode: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | exeerrordiag: 
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | exitcode: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | exitmsg: OK
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | cpuconsumptiontime: 29637 s
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | nevents: 400
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | neventsw: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | pid: 1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | pgrp: 1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:32,906 | INFO     | corecount: 4
[2024-06-28 04:28:47] 2024-06-28 02:28:32,907 | INFO     | event service: False
[2024-06-28 04:28:47] 2024-06-28 02:28:32,907 | INFO     | sizes: {0: 2387022, 4: 2387228, 11: 2387256, 8116: 2424002, 8124: 2424116}
[2024-06-28 04:28:47] 2024-06-28 02:28:32,907 | INFO     | --------------------------------------------------
[2024-06-28 04:28:47] 2024-06-28 02:28:32,907 | INFO     | 
[2024-06-28 04:28:47] 2024-06-28 02:28:32,907 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-28 04:28:47] 2024-06-28 02:28:32,931 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,932 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,934 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,934 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 04:28:47] 2024-06-28 02:28:32,934 | INFO     | job 6246089022 has completed (purged errors)
[2024-06-28 04:28:47] 2024-06-28 02:28:32,934 | INFO     | overall cleanup function is called
[2024-06-28 04:28:47] 2024-06-28 02:28:33,942 | INFO     | --- collectZombieJob: --- 10, [1577457]
[2024-06-28 04:28:47] 2024-06-28 02:28:33,942 | INFO     | zombie collector waiting for pid 1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:33,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 04:28:47] 2024-06-28 02:28:34,947 | INFO     | collected zombie processes
[2024-06-28 04:28:47] 2024-06-28 02:28:34,947 | INFO     | will now attempt to kill all subprocesses of pid=1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:35,032 | INFO     | process IDs to be killed: [1577457] (in reverse order)
[2024-06-28 04:28:47] 2024-06-28 02:28:35,109 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 04:28:47] 2024-06-28 02:28:35,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 04:28:47] 2024-06-28 02:28:35,114 | INFO     | did not find any defunct processes belonging to 1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:35,119 | INFO     | did not find any defunct processes belonging to 1577457
[2024-06-28 04:28:47] 2024-06-28 02:28:35,119 | INFO     | ready for new job
[2024-06-28 04:28:47] 2024-06-28 02:28:35,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 04:28:47] 2024-06-28 02:28:35,121 | INFO     | *************************************
[2024-06-28 04:28:47] 2024-06-28 02:28:35,121 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 04:28:47] 2024-06-28 02:28:35,121 | INFO     | *************************************
[2024-06-28 04:28:47] 2024-06-28 02:28:35,121 | INFO     | 
[2024-06-28 04:28:47] 2024-06-28 02:28:35,124 | INFO     | architecture information:
[2024-06-28 04:28:47] 2024-06-28 02:28:35,124 | INFO     | executing command: cat /etc/os-release
[2024-06-28 04:28:47] 2024-06-28 02:28:35,137 | INFO     | cat /etc/os-release:
[2024-06-28 04:28:47] NAME="CentOS Linux"
[2024-06-28 04:28:47] VERSION="7 (Core)"
[2024-06-28 04:28:47] ID="centos"
[2024-06-28 04:28:47] ID_LIKE="rhel fedora"
[2024-06-28 04:28:47] VERSION_ID="7"
[2024-06-28 04:28:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 04:28:47] ANSI_COLOR="0;31"
[2024-06-28 04:28:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 04:28:47] HOME_URL="https://www.centos.org/"
[2024-06-28 04:28:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 04:28:47] 
[2024-06-28 04:28:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 04:28:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 04:28:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 04:28:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 04:28:47] 
[2024-06-28 04:28:47] 2024-06-28 02:28:35,138 | INFO     | *************************************
[2024-06-28 04:28:47] 2024-06-28 02:28:35,641 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-28 04:28:47] 2024-06-28 02:28:35,660 | INFO     | sufficient remaining disk space (1675311972352 B)
[2024-06-28 04:28:47] 2024-06-28 02:28:35,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 04:28:47] 2024-06-28 02:28:35,661 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 04:28:47] 2024-06-28 02:28:35,661 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-28 04:28:47] 2024-06-28 02:28:35,661 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 04:28:47] 2024-06-28 02:28:35,662 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 04:28:47] 2024-06-28 02:28:35,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 04:28:47] 2024-06-28 02:28:35,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 04:28:47] 2024-06-28 02:28:35,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 04:28:47] 2024-06-28 02:28:36,127 | INFO     | all payload control threads have been joined
[2024-06-28 04:28:47] 2024-06-28 02:28:36,423 | INFO     | all job control threads have been joined
[2024-06-28 04:28:47] 2024-06-28 02:28:36,468 | INFO     | all data control threads have been joined
[2024-06-28 04:28:47] 2024-06-28 02:28:36,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 04:28:47] 2024-06-28 02:28:36,639 | INFO     | aborting loop
[2024-06-28 04:28:47] 2024-06-28 02:28:36,666 | INFO     | [job] retrieve thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:36,777 | INFO     | [job] validate thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:36,923 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,037 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,132 | INFO     | [payload] control thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,359 | INFO     | [payload] failed_post thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,386 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,428 | INFO     | [job] control thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,473 | INFO     | [data] control thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,547 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,644 | INFO     | [job] job monitor thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,667 | INFO     | [data] copytool_out thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,842 | INFO     | [data] copytool_in thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:37,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 04:28:47] 2024-06-28 02:28:38,267 | INFO     | [payload] validate_post thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:38,921 | INFO     | [job] queue monitor thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:39,731 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 04:28:47] 2024-06-28 02:28:41,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47913326715968)>', '<ExcThread(monitor, started 47913506989824)>']
[2024-06-28 04:28:47] 2024-06-28 02:28:42,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 04:28:47] 2024-06-28 02:28:42,698 | INFO     | [monitor] control thread has ended
[2024-06-28 04:28:47] 2024-06-28 02:28:46,818 | INFO     | all workflow threads have been joined
[2024-06-28 04:28:47] 2024-06-28 02:28:46,818 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 04:28:47] 2024-06-28 02:28:46,818 | INFO     | traces error code: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:46,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 04:28:47] 2024-06-28 02:28:46,915 [wrapper] ==== pilot stdout END ====
[2024-06-28 04:28:47] 2024-06-28 02:28:46,918 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 04:28:47] 2024-06-28 02:28:46,921 [wrapper] pilotpid: 1570566
[2024-06-28 04:28:47] 2024-06-28 02:28:46,924 [wrapper] Pilot exit status: 0
[2024-06-28 04:28:47] 2024-06-28 02:28:46,935 [wrapper] pandaids: 6246089022
[2024-06-28 04:28:47] 2024-06-28 02:28:46,985 [wrapper] cleanup supervisor_pilot 1688809 1570567
[2024-06-28 04:28:47] 2024-06-28 02:28:46,989 [wrapper] Test setup, not cleaning
[2024-06-28 04:28:47] 2024-06-28 02:28:46,992 [wrapper] ==== wrapper stdout END ====
[2024-06-28 04:28:47] 2024-06-28 02:28:46,994 [wrapper] ==== wrapper stderr END ====
[2024-06-28 04:28:47] 2024-06-28 02:28:46,999 [wrapper] apfmon messages muted
[2024-06-28 04:28:47]  *** Error codes and diagnostics ***
[2024-06-28 04:28:47]     "exeErrorCode": 0,
[2024-06-28 04:28:47]     "exeErrorDiag": "",
[2024-06-28 04:28:47]     "pilotErrorCode": 0,
[2024-06-28 04:28:47]     "pilotErrorDiag": "",
[2024-06-28 04:28:47]  *** Listing of results directory ***
[2024-06-28 04:28:47] total 566608
[2024-06-28 04:28:47] -rwx------ 1 boinc boinc     32220 Jun 27 14:40 runpilot2-wrapper.sh
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:41 pilot3.tar.gz
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:41 queuedata.json
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc       100 Jun 28 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 04:28:47] -rwxr-xr-x 1 boinc boinc      7986 Jun 28 02:12 run_atlas
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc       105 Jun 28 02:12 job.xml
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc      6457 Jun 28 02:12 init_data.xml
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc 397792840 Jun 28 02:12 EVNT.34667576._000002.pool.root.1
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc     17537 Jun 28 02:12 start_atlas.sh
[2024-06-28 04:28:47] drwxrwx--x 2 boinc boinc      4096 Jun 28 02:12 shared
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc    482495 Jun 28 02:12 input.tar.gz
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc         0 Jun 28 02:12 boinc_lockfile
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc      2584 Jun 28 02:12 pandaJob.out
[2024-06-28 04:28:47] -rw------- 1 boinc boinc       424 Jun 28 02:12 setup.sh.local
[2024-06-28 04:28:47] -rw------- 1 boinc boinc   1036914 Jun 28 02:12 agis_schedconf.cvmfs.json
[2024-06-28 04:28:47] -rw------- 1 boinc boinc         0 Jun 28 02:12 agis_ddmendpoints.agis.ALL.json
[2024-06-28 04:28:47] -rw------- 1 boinc boinc   1321378 Jun 28 02:12 cric_ddmendpoints.json
[2024-06-28 04:28:47] drwx------ 4 boinc boinc      4096 Jun 28 02:12 pilot3
[2024-06-28 04:28:47] -rw------- 1 boinc boinc 176671295 Jun 28 04:27 HITS.40102679._000041.pool.root.1
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc       529 Jun 28 04:27 boinc_task_state.xml
[2024-06-28 04:28:47] -rw------- 1 boinc boinc        95 Jun 28 04:28 pilot_heartbeat.json
[2024-06-28 04:28:47] -rw------- 1 boinc boinc      1039 Jun 28 04:28 memory_monitor_summary.json
[2024-06-28 04:28:47] -rw------- 1 boinc boinc    279339 Jun 28 04:28 log.40102679._000041.job.log.tgz.1
[2024-06-28 04:28:47] -rw------- 1 boinc boinc      7748 Jun 28 04:28 heartbeat.json
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc      8192 Jun 28 04:28 boinc_mmap_file
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc        27 Jun 28 04:28 wrapper_checkpoint.txt
[2024-06-28 04:28:47] -rw------- 1 boinc boinc      4345 Jun 28 04:28 pilotlog.txt
[2024-06-28 04:28:47] -rw------- 1 boinc boinc    814108 Jun 28 04:28 log.40102679._000041.job.log.1
[2024-06-28 04:28:47] -rw------- 1 boinc boinc       357 Jun 28 04:28 output.list
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc       620 Jun 28 04:28 runtime_log
[2024-06-28 04:28:47] -rw------- 1 boinc boinc   1116160 Jun 28 04:28 result.tar.gz
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc     11409 Jun 28 04:28 runtime_log.err
[2024-06-28 04:28:47] -rw------- 1 boinc boinc       654 Jun 28 04:28 nKQODmUb3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmmroKDmJzvTJo.diag
[2024-06-28 04:28:47] -rw-r--r-- 1 boinc boinc     21287 Jun 28 04:28 stderr.txt
[2024-06-28 04:28:47] HITS file was successfully produced:
[2024-06-28 04:28:47] -rw------- 1 boinc boinc 176671295 Jun 28 04:27 shared/HITS.pool.root.1
[2024-06-28 04:28:47]  *** Contents of shared directory: ***
[2024-06-28 04:28:47] total 562596
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc 397792840 Jun 28 02:12 ATLAS.root_0
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc     17537 Jun 28 02:12 start_atlas.sh
[2024-06-28 04:28:47] -rw-r--r-- 2 boinc boinc    482495 Jun 28 02:12 input.tar.gz
[2024-06-28 04:28:47] -rw------- 1 boinc boinc 176671295 Jun 28 04:27 HITS.pool.root.1
[2024-06-28 04:28:47] -rw------- 1 boinc boinc   1116160 Jun 28 04:28 result.tar.gz
04:28:49 (1566911): run_atlas exited; CPU time 29563.569904
04:28:49 (1566911): called boinc_finish(0)

</stderr_txt>
]]>

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