Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:02:08 (1450223): wrapper (7.7.26015): starting
00:02:08 (1450223): wrapper: running run_atlas (--nthreads 4)
[2024-06-28 00:02:08] Arguments: --nthreads 4
[2024-06-28 00:02:08] Threads: 4
[2024-06-28 00:02:08] Checking for CVMFS
[2024-06-28 00:02:08] No cvmfs_config command found, will try listing directly
[2024-06-28 00:02:08] CVMFS is ok
[2024-06-28 00:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-28 00:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-28 00:02:08] Further information can be found at the LHC@home message board.
[2024-06-28 00:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-28 00:02:08] Checking for apptainer binary...
[2024-06-28 00:02:08] which: no apptainer in ((null))
[2024-06-28 00:02:08] apptainer is not installed, using version from CVMFS
[2024-06-28 00:02:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-28 00:02:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-28 00:02:09] apptainer works
[2024-06-28 00:02:09] Set ATHENA_PROC_NUMBER=4
[2024-06-28 00:02:09] Set ATHENA_CORE_NUMBER=4
[2024-06-28 00:02:09] Starting ATLAS job with PandaID=6246089012
[2024-06-28 00:02:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 02:12:33]  *** The last 200 lines of the pilot log: ***
[2024-06-28 02:12:33] 2024-06-28 00:12:11,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-28 02:12:33] 2024-06-28 00:12:11,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-28 02:12:33] 2024-06-28 00:12:11,379 | INFO     | fitting pss+swap vs Time
[2024-06-28 02:12:33] 2024-06-28 00:12:11,379 | INFO     | model: linear, x: [1719525759.0, 1719525820.0, 1719525881.0, 1719525942.0, 1719526003.0, 1719526064.0, 1719526125.0, 1719526186.0, 1719526247.0, 1719526308.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,379 | INFO     | sum of square deviations: 650252192.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,380 | INFO     | sum of deviations: 42232877280.5
[2024-06-28 02:12:33] 2024-06-28 00:12:11,380 | INFO     | mean x: 1719529632.5
[2024-06-28 02:12:33] 2024-06-28 00:12:11,380 | INFO     | mean y: 2210104.7734375
[2024-06-28 02:12:33] 2024-06-28 00:12:11,380 | INFO     | -- intersect: -111678588273.15155
[2024-06-28 02:12:33] 2024-06-28 00:12:11,381 | INFO     | intersect: -111678588273.15155
[2024-06-28 02:12:33] 2024-06-28 00:12:11,381 | INFO     | chi2: 4.216321868420737
[2024-06-28 02:12:33] 2024-06-28 00:12:11,381 | INFO     | model: linear, x: [1719525759.0, 1719525820.0, 1719525881.0, 1719525942.0, 1719526003.0, 1719526064.0, 1719526125.0, 1719526186.0, 1719526247.0, 1719526308.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,381 | INFO     | sum of square deviations: 576985702.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,382 | INFO     | sum of deviations: 47889469713.99999
[2024-06-28 02:12:33] 2024-06-28 00:12:11,382 | INFO     | mean x: 1719529480.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,382 | INFO     | mean y: 2221361.8048780486
[2024-06-28 02:12:33] 2024-06-28 00:12:11,382 | INFO     | -- intersect: -142717701626.49503
[2024-06-28 02:12:33] 2024-06-28 00:12:11,382 | INFO     | intersect: -142717701626.49503
[2024-06-28 02:12:33] 2024-06-28 00:12:11,383 | INFO     | chi2: 3.455394220035553
[2024-06-28 02:12:33] 2024-06-28 00:12:11,383 | INFO     | current chi2=3.455394220035553 (change=18.047190706296732 %)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,383 | INFO     | right removable region: 122
[2024-06-28 02:12:33] 2024-06-28 00:12:11,383 | INFO     | model: linear, x: [1719526064.0, 1719526125.0, 1719526186.0, 1719526247.0, 1719526308.0, 1719526369.0, 1719526430.0, 1719526491.0, 1719526552.0, 1719526613.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,383 | INFO     | sum of square deviations: 576985702.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,384 | INFO     | sum of deviations: 17128644327.999994
[2024-06-28 02:12:33] 2024-06-28 00:12:11,384 | INFO     | mean x: 1719529785.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,384 | INFO     | mean y: 2262037.7560975607
[2024-06-28 02:12:33] 2024-06-28 00:12:11,384 | INFO     | -- intersect: -51044434607.54015
[2024-06-28 02:12:33] 2024-06-28 00:12:11,385 | INFO     | intersect: -51044434607.54015
[2024-06-28 02:12:33] 2024-06-28 00:12:11,385 | INFO     | chi2: 2.208869650391096
[2024-06-28 02:12:33] 2024-06-28 00:12:11,385 | INFO     | current chi2=2.208869650391096 (change=47.61145568759794 %)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,385 | INFO     | model: linear, x: [1719526369.0, 1719526430.0, 1719526491.0, 1719526552.0, 1719526613.0, 1719526674.0, 1719526735.0, 1719526796.0, 1719526857.0, 1719526918.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,385 | INFO     | sum of square deviations: 509440249.5
[2024-06-28 02:12:33] 2024-06-28 00:12:11,386 | INFO     | sum of deviations: -4359652371.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,386 | INFO     | mean x: 1719529937.5
[2024-06-28 02:12:33] 2024-06-28 00:12:11,386 | INFO     | mean y: 2310686.033898305
[2024-06-28 02:12:33] 2024-06-28 00:12:11,386 | INFO     | -- intersect: 14717584511.345098
[2024-06-28 02:12:33] 2024-06-28 00:12:11,387 | INFO     | intersect: 14717584511.345098
[2024-06-28 02:12:33] 2024-06-28 00:12:11,387 | INFO     | chi2: 0.8753796163149361
[2024-06-28 02:12:33] 2024-06-28 00:12:11,387 | INFO     | current chi2=0.8753796163149361 (change=60.369792931876084 %)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,387 | INFO     | model: linear, x: [1719526674.0, 1719526735.0, 1719526796.0, 1719526857.0, 1719526918.0, 1719526979.0, 1719527040.0, 1719527101.0, 1719527162.0, 1719527223.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,387 | INFO     | sum of square deviations: 447383272.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,388 | INFO     | sum of deviations: -7087132744.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,388 | INFO     | mean x: 1719530090.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,388 | INFO     | mean y: 2317156.7168141594
[2024-06-28 02:12:33] 2024-06-28 00:12:11,388 | INFO     | -- intersect: 27241909622.150497
[2024-06-28 02:12:33] 2024-06-28 00:12:11,388 | INFO     | intersect: 27241909622.150497
[2024-06-28 02:12:33] 2024-06-28 00:12:11,389 | INFO     | chi2: 0.795993560295868
[2024-06-28 02:12:33] 2024-06-28 00:12:11,389 | INFO     | current chi2=0.795993560295868 (change=9.068757661191338 %)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,389 | INFO     | left removable region: 30
[2024-06-28 02:12:33] 2024-06-28 00:12:11,389 | INFO     | model: linear, x: [1719527589.0, 1719527650.0, 1719527711.0, 1719527772.0, 1719527833.0, 1719527894.0, 1719527955.0, 1719528016.0, 1719528077.0, 1719528138.0, 1719
[2024-06-28 02:12:33] 2024-06-28 00:12:11,389 | INFO     | sum of square deviations: 241429643.0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | sum of deviations: 1209720584.9999998
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | mean x: 1719530364.5
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | mean y: 2330228.8913043477
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | -- intersect: -8613642742.034237
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | intersect: -8613642742.034237
[2024-06-28 02:12:33] 2024-06-28 00:12:11,390 | INFO     | chi2: 5.875972288568382e-05
[2024-06-28 02:12:33] 2024-06-28 00:12:11,391 | INFO     | -- intersect: -8613642742.034237
[2024-06-28 02:12:33] 2024-06-28 00:12:11,391 | INFO     | current memory leak: 5.01 B/s (using 92 data points, chi2=0.00)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,391 | INFO     | ..............................
[2024-06-28 02:12:33] 2024-06-28 00:12:11,391 | INFO     | . Timing measurements:
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . get job = 0 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . initial setup = 1 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . payload setup = 4 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . stage-in = 0 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . payload execution = 7763 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . stage-out = 0 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | . log creation = 0 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,392 | INFO     | ..............................
[2024-06-28 02:12:33] 2024-06-28 00:12:11,469 | INFO     | 
[2024-06-28 02:12:33] 2024-06-28 00:12:11,469 | INFO     | job summary report
[2024-06-28 02:12:33] 2024-06-28 00:12:11,469 | INFO     | --------------------------------------------------
[2024-06-28 02:12:33] 2024-06-28 00:12:11,469 | INFO     | PanDA job id: 6246089012
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | task id: 40102679
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | errors: (none)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | pilot state: finished 
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | transexitcode: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | exeerrorcode: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | exeerrordiag: 
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | exitcode: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | exitmsg: OK
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | cpuconsumptiontime: 28403 s
[2024-06-28 02:12:33] 2024-06-28 00:12:11,470 | INFO     | nevents: 400
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | neventsw: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | pid: 1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | pgrp: 1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | corecount: 4
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | event service: False
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | sizes: {0: 2387022, 3: 2387228, 11: 2387256, 7771: 2414908, 7773: 2423946, 7780: 2424060}
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | --------------------------------------------------
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | 
[2024-06-28 02:12:33] 2024-06-28 00:12:11,471 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,495 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 02:12:33] 2024-06-28 00:12:11,496 | INFO     | job 6246089012 has completed (purged errors)
[2024-06-28 02:12:33] 2024-06-28 00:12:11,496 | INFO     | overall cleanup function is called
[2024-06-28 02:12:33] 2024-06-28 00:12:12,503 | INFO     | --- collectZombieJob: --- 10, [1460755]
[2024-06-28 02:12:33] 2024-06-28 00:12:12,503 | INFO     | zombie collector waiting for pid 1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:12,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 02:12:33] 2024-06-28 00:12:13,508 | INFO     | collected zombie processes
[2024-06-28 02:12:33] 2024-06-28 00:12:13,509 | INFO     | will now attempt to kill all subprocesses of pid=1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:13,613 | INFO     | process IDs to be killed: [1460755] (in reverse order)
[2024-06-28 02:12:33] 2024-06-28 00:12:13,685 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 02:12:33] 2024-06-28 00:12:13,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 02:12:33] 2024-06-28 00:12:13,690 | INFO     | did not find any defunct processes belonging to 1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:13,695 | INFO     | did not find any defunct processes belonging to 1460755
[2024-06-28 02:12:33] 2024-06-28 00:12:13,695 | INFO     | ready for new job
[2024-06-28 02:12:33] 2024-06-28 00:12:13,696 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 02:12:33] 2024-06-28 00:12:13,697 | INFO     | *************************************
[2024-06-28 02:12:33] 2024-06-28 00:12:13,697 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 02:12:33] 2024-06-28 00:12:13,698 | INFO     | *************************************
[2024-06-28 02:12:33] 2024-06-28 00:12:13,698 | INFO     | 
[2024-06-28 02:12:33] 2024-06-28 00:12:13,700 | INFO     | architecture information:
[2024-06-28 02:12:33] 2024-06-28 00:12:13,700 | INFO     | executing command: cat /etc/os-release
[2024-06-28 02:12:33] 2024-06-28 00:12:13,716 | INFO     | cat /etc/os-release:
[2024-06-28 02:12:33] NAME="CentOS Linux"
[2024-06-28 02:12:33] VERSION="7 (Core)"
[2024-06-28 02:12:33] ID="centos"
[2024-06-28 02:12:33] ID_LIKE="rhel fedora"
[2024-06-28 02:12:33] VERSION_ID="7"
[2024-06-28 02:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 02:12:33] ANSI_COLOR="0;31"
[2024-06-28 02:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 02:12:33] HOME_URL="https://www.centos.org/"
[2024-06-28 02:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 02:12:33] 
[2024-06-28 02:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 02:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 02:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 02:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 02:12:33] 
[2024-06-28 02:12:33] 2024-06-28 00:12:13,716 | INFO     | *************************************
[2024-06-28 02:12:33] 2024-06-28 00:12:14,219 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-28 02:12:33] 2024-06-28 00:12:14,238 | INFO     | sufficient remaining disk space (1674531831808 B)
[2024-06-28 02:12:33] 2024-06-28 00:12:14,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 02:12:33] 2024-06-28 00:12:14,238 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 02:12:33] 2024-06-28 00:12:14,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 02:12:33] 2024-06-28 00:12:14,422 | INFO     | aborting loop
[2024-06-28 02:12:33] 2024-06-28 00:12:14,452 | INFO     | all data control threads have been joined
[2024-06-28 02:12:33] 2024-06-28 00:12:14,882 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 02:12:33] 2024-06-28 00:12:14,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 02:12:33] 2024-06-28 00:12:14,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 02:12:33] 2024-06-28 00:12:15,244 | INFO     | [job] retrieve thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,284 | INFO     | [payload] validate_post thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 02:12:33] 2024-06-28 00:12:15,381 | INFO     | [payload] failed_post thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,427 | INFO     | [job] job monitor thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,458 | INFO     | [data] control thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 02:12:33] 2024-06-28 00:12:15,523 | INFO     | all payload control threads have been joined
[2024-06-28 02:12:33] 2024-06-28 00:12:15,533 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,592 | INFO     | [job] validate thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:15,764 | INFO     | all job control threads have been joined
[2024-06-28 02:12:33] 2024-06-28 00:12:15,998 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:16,016 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:16,400 | INFO     | [data] copytool_in thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:16,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 02:12:33] 2024-06-28 00:12:16,529 | INFO     | [payload] control thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:16,769 | INFO     | [job] control thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:17,365 | INFO     | [data] copytool_out thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:17,483 | INFO     | [job] queue monitor thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:19,493 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:24,983 | INFO     | job.realtimelogging is not enabled
[2024-06-28 02:12:33] 2024-06-28 00:12:25,989 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 02:12:33] 2024-06-28 00:12:28,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47460774577216)>', '<ExcThread(monitor, started 47460961154816)>']
[2024-06-28 02:12:33] 2024-06-28 00:12:28,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 02:12:33] 2024-06-28 00:12:28,950 | INFO     | [monitor] control thread has ended
[2024-06-28 02:12:33] 2024-06-28 00:12:33,120 | INFO     | all workflow threads have been joined
[2024-06-28 02:12:33] 2024-06-28 00:12:33,120 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 02:12:33] 2024-06-28 00:12:33,120 | INFO     | traces error code: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:33,121 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 02:12:33] 2024-06-28 00:12:33,213 [wrapper] ==== pilot stdout END ====
[2024-06-28 02:12:33] 2024-06-28 00:12:33,216 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 02:12:33] 2024-06-28 00:12:33,220 [wrapper] pilotpid: 1453891
[2024-06-28 02:12:33] 2024-06-28 00:12:33,223 [wrapper] Pilot exit status: 0
[2024-06-28 02:12:33] 2024-06-28 00:12:33,233 [wrapper] pandaids: 6246089012
[2024-06-28 02:12:33] 2024-06-28 00:12:33,282 [wrapper] cleanup supervisor_pilot 1557237 1453892
[2024-06-28 02:12:33] 2024-06-28 00:12:33,285 [wrapper] Test setup, not cleaning
[2024-06-28 02:12:33] 2024-06-28 00:12:33,289 [wrapper] ==== wrapper stdout END ====
[2024-06-28 02:12:33] 2024-06-28 00:12:33,292 [wrapper] ==== wrapper stderr END ====
[2024-06-28 02:12:33] 2024-06-28 00:12:33,298 [wrapper] apfmon messages muted
[2024-06-28 02:12:33]  *** Error codes and diagnostics ***
[2024-06-28 02:12:33]     "exeErrorCode": 0,
[2024-06-28 02:12:33]     "exeErrorDiag": "",
[2024-06-28 02:12:33]     "pilotErrorCode": 0,
[2024-06-28 02:12:33]     "pilotErrorDiag": "",
[2024-06-28 02:12:33]  *** Listing of results directory ***
[2024-06-28 02:12:33] total 562436
[2024-06-28 02:12:33] -rwx------ 1 boinc boinc     32220 Jun 27 14:40 runpilot2-wrapper.sh
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:41 pilot3.tar.gz
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:41 queuedata.json
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc       100 Jun 28 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 02:12:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 28 00:02 run_atlas
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc       105 Jun 28 00:02 job.xml
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc 397792840 Jun 28 00:02 EVNT.34667576._000002.pool.root.1
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc     17537 Jun 28 00:02 start_atlas.sh
[2024-06-28 02:12:33] drwxrwx--x 2 boinc boinc      4096 Jun 28 00:02 shared
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc    482495 Jun 28 00:02 input.tar.gz
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc      6457 Jun 28 00:02 init_data.xml
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc         0 Jun 28 00:02 boinc_lockfile
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc      2584 Jun 28 00:02 pandaJob.out
[2024-06-28 02:12:33] -rw------- 1 boinc boinc       424 Jun 28 00:02 setup.sh.local
[2024-06-28 02:12:33] -rw------- 1 boinc boinc   1036868 Jun 28 00:02 agis_schedconf.cvmfs.json
[2024-06-28 02:12:33] -rw------- 1 boinc boinc         0 Jun 28 00:02 agis_ddmendpoints.agis.ALL.json
[2024-06-28 02:12:33] -rw------- 1 boinc boinc   1321378 Jun 28 00:02 cric_ddmendpoints.json
[2024-06-28 02:12:33] drwx------ 4 boinc boinc      4096 Jun 28 00:02 pilot3
[2024-06-28 02:12:33] -rw------- 1 boinc boinc        95 Jun 28 02:11 pilot_heartbeat.json
[2024-06-28 02:12:33] -rw------- 1 boinc boinc 172482062 Jun 28 02:11 HITS.40102679._000031.pool.root.1
[2024-06-28 02:12:33] -rw------- 1 boinc boinc      1037 Jun 28 02:11 memory_monitor_summary.json
[2024-06-28 02:12:33] -rw------- 1 boinc boinc    264547 Jun 28 02:12 log.40102679._000031.job.log.tgz.1
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc       529 Jun 28 02:12 boinc_task_state.xml
[2024-06-28 02:12:33] -rw------- 1 boinc boinc      7745 Jun 28 02:12 heartbeat.json
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc      8192 Jun 28 02:12 boinc_mmap_file
[2024-06-28 02:12:33] -rw------- 1 boinc boinc      4294 Jun 28 02:12 pilotlog.txt
[2024-06-28 02:12:33] -rw------- 1 boinc boinc    789711 Jun 28 02:12 log.40102679._000031.job.log.1
[2024-06-28 02:12:33] -rw------- 1 boinc boinc       357 Jun 28 02:12 output.list
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc       620 Jun 28 02:12 runtime_log
[2024-06-28 02:12:33] -rw------- 1 boinc boinc   1075200 Jun 28 02:12 result.tar.gz
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc     11409 Jun 28 02:12 runtime_log.err
[2024-06-28 02:12:33] -rw------- 1 boinc boinc       654 Jun 28 02:12 BKBODmUb3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmcroKDm8CTHhm.diag
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc        27 Jun 28 02:12 wrapper_checkpoint.txt
[2024-06-28 02:12:33] -rw-r--r-- 1 boinc boinc     21239 Jun 28 02:12 stderr.txt
[2024-06-28 02:12:33] HITS file was successfully produced:
[2024-06-28 02:12:33] -rw------- 1 boinc boinc 172482062 Jun 28 02:11 shared/HITS.pool.root.1
[2024-06-28 02:12:33]  *** Contents of shared directory: ***
[2024-06-28 02:12:33] total 558464
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc 397792840 Jun 28 00:02 ATLAS.root_0
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc     17537 Jun 28 00:02 start_atlas.sh
[2024-06-28 02:12:33] -rw-r--r-- 2 boinc boinc    482495 Jun 28 00:02 input.tar.gz
[2024-06-28 02:12:33] -rw------- 1 boinc boinc 172482062 Jun 28 02:11 HITS.pool.root.1
[2024-06-28 02:12:33] -rw------- 1 boinc boinc   1075200 Jun 28 02:12 result.tar.gz
02:12:35 (1450223): run_atlas exited; CPU time 28321.421695
02:12:35 (1450223): called boinc_finish(0)

</stderr_txt>
]]>

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