Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:51:57 (867191): wrapper (7.7.26015): starting
14:51:57 (867191): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 14:51:57] Arguments: --nthreads 4
[2024-06-27 14:51:57] Threads: 4
[2024-06-27 14:51:57] Checking for CVMFS
[2024-06-27 14:51:57] No cvmfs_config command found, will try listing directly
[2024-06-27 14:52:11] CVMFS is ok
[2024-06-27 14:52:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 14:52:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 14:52:11] Further information can be found at the LHC@home message board.
[2024-06-27 14:52:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 14:52:11] Checking for apptainer binary...
[2024-06-27 14:52:11] which: no apptainer in ((null))
[2024-06-27 14:52:11] apptainer is not installed, using version from CVMFS
[2024-06-27 14:52:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 14:52:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-27 14:52:12] apptainer works
[2024-06-27 14:52:12] Set ATHENA_PROC_NUMBER=4
[2024-06-27 14:52:12] Set ATHENA_CORE_NUMBER=4
[2024-06-27 14:52:12] Starting ATLAS job with PandaID=6246090437
[2024-06-27 14:52:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 17:03:19]  *** The last 200 lines of the pilot log: ***
[2024-06-27 17:03:19] 2024-06-27 15:03:05,113 | INFO     | -- intersect: -94563052797.958
[2024-06-27 17:03:19] 2024-06-27 15:03:05,113 | INFO     | intersect: -94563052797.958
[2024-06-27 17:03:19] 2024-06-27 15:03:05,114 | INFO     | chi2: 3.6317701132473856
[2024-06-27 17:03:19] 2024-06-27 15:03:05,114 | INFO     | model: linear, x: [1719492789.0, 1719492850.0, 1719492911.0, 1719492972.0, 1719493033.0, 1719493094.0, 1719493155.0, 1719493216.0, 1719493277.0, 1719493338.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,114 | INFO     | sum of square deviations: 576985702.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,114 | INFO     | sum of deviations: 35301949402.00001
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | mean x: 1719496510.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | mean y: 2321543.4227642277
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | -- intersect: -105202328385.5552
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | intersect: -105202328385.5552
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | chi2: 3.6238005510488467
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | current chi2=3.6238005510488467 (change=0.21944016140969014 %)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | right removable region: 122
[2024-06-27 17:03:19] 2024-06-27 15:03:05,115 | INFO     | model: linear, x: [1719493094.0, 1719493155.0, 1719493216.0, 1719493277.0, 1719493338.0, 1719493399.0, 1719493460.0, 1719493521.0, 1719493582.0, 1719493643.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,116 | INFO     | sum of square deviations: 576985702.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,116 | INFO     | sum of deviations: 7617318208.999999
[2024-06-27 17:03:19] 2024-06-27 15:03:05,116 | INFO     | mean x: 1719496815.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,116 | INFO     | mean y: 2380731.861788618
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | -- intersect: -22698276067.458694
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | intersect: -22698276067.458694
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | chi2: 1.267545308540891
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | current chi2=1.267545308540891 (change=65.0984156756689 %)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | model: linear, x: [1719493399.0, 1719493460.0, 1719493521.0, 1719493582.0, 1719493643.0, 1719493704.0, 1719493765.0, 1719493826.0, 1719493887.0, 1719493948.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,117 | INFO     | sum of square deviations: 509440249.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,118 | INFO     | sum of deviations: -12782577297.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,118 | INFO     | mean x: 1719496967.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,118 | INFO     | mean y: 2426803.2966101696
[2024-06-27 17:03:19] 2024-06-27 15:03:05,118 | INFO     | -- intersect: 43147040762.358345
[2024-06-27 17:03:19] 2024-06-27 15:03:05,118 | INFO     | intersect: 43147040762.358345
[2024-06-27 17:03:19] 2024-06-27 15:03:05,119 | INFO     | chi2: 0.09099616106675269
[2024-06-27 17:03:19] 2024-06-27 15:03:05,119 | INFO     | current chi2=0.09099616106675269 (change=92.82107231563177 %)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,119 | INFO     | model: linear, x: [1719493704.0, 1719493765.0, 1719493826.0, 1719493887.0, 1719493948.0, 1719494009.0, 1719494070.0, 1719494131.0, 1719494192.0, 1719494253.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,119 | INFO     | sum of square deviations: 447383272.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | sum of deviations: -13806513446.000002
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | mean x: 1719497120.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | mean y: 2429092.0619469024
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | -- intersect: 53067131313.73616
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | intersect: 53067131313.73616
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | chi2: 0.031709457607352755
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | current chi2=0.031709457607352755 (change=65.15297213022929 %)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,120 | INFO     | model: linear, x: [1719494009.0, 1719494070.0, 1719494131.0, 1719494192.0, 1719494253.0, 1719494314.0, 1719494375.0, 1719494436.0, 1719494497.0, 1719494558.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,121 | INFO     | sum of square deviations: 390582207.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,121 | INFO     | sum of deviations: -12431277992.500002
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | mean x: 1719497272.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | mean y: 2425444.046296296
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | -- intersect: 54729825255.664
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | intersect: 54729825255.664
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | chi2: 0.029458975710724308
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | current chi2=0.029458975710724308 (change=7.097194548375397 %)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | left removable region: 40
[2024-06-27 17:03:19] 2024-06-27 15:03:05,122 | INFO     | model: linear, x: [1719495229.0, 1719495290.0, 1719495351.0, 1719495412.0, 1719495473.0, 1719495534.0, 1719495595.0, 1719495656.0, 1719495717.0, 1719495778.0, 1719
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | sum of square deviations: 170944600.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | sum of deviations: -7628113806.0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | mean x: 1719497699.5
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | mean y: 2417357.2926829266
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | -- intersect: 76732095291.40906
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | intersect: 76732095291.40906
[2024-06-27 17:03:19] 2024-06-27 15:03:05,123 | INFO     | chi2: 0.02054156234640082
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | -- intersect: 76732095291.40906
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | current memory leak: -44.62 B/s (using 82 data points, chi2=0.02)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | ..............................
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | . Timing measurements:
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | . get job = 0 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | . initial setup = 1 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | . payload setup = 7 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,124 | INFO     | . stage-in = 0 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,125 | INFO     | . payload execution = 7787 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,125 | INFO     | . stage-out = 0 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,125 | INFO     | . log creation = 0 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,125 | INFO     | ..............................
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | 
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | job summary report
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | --------------------------------------------------
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | PanDA job id: 6246090437
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | task id: 40102775
[2024-06-27 17:03:19] 2024-06-27 15:03:05,190 | INFO     | errors: (none)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | pilot state: finished 
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | transexitcode: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | exeerrorcode: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | exeerrordiag: 
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | exitcode: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | exitmsg: OK
[2024-06-27 17:03:19] 2024-06-27 15:03:05,191 | INFO     | cpuconsumptiontime: 28230 s
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | nevents: 400
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | neventsw: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | pid: 878481
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | pgrp: 878481
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | corecount: 4
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | event service: False
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | sizes: {0: 2386845, 1: 2387044, 6: 2387250, 11: 2387278, 7798: 2414788, 7800: 2423954, 7806: 2424068}
[2024-06-27 17:03:19] 2024-06-27 15:03:05,192 | INFO     | --------------------------------------------------
[2024-06-27 17:03:19] 2024-06-27 15:03:05,193 | INFO     | 
[2024-06-27 17:03:19] 2024-06-27 15:03:05,193 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-27 17:03:19] 2024-06-27 15:03:05,215 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,216 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | job 6246090437 has completed (purged errors)
[2024-06-27 17:03:19] 2024-06-27 15:03:05,218 | INFO     | overall cleanup function is called
[2024-06-27 17:03:19] 2024-06-27 15:03:06,225 | INFO     | --- collectZombieJob: --- 10, [878481]
[2024-06-27 17:03:19] 2024-06-27 15:03:06,225 | INFO     | zombie collector waiting for pid 878481
[2024-06-27 17:03:19] 2024-06-27 15:03:06,225 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 17:03:19] 2024-06-27 15:03:07,230 | INFO     | collected zombie processes
[2024-06-27 17:03:19] 2024-06-27 15:03:07,231 | INFO     | will now attempt to kill all subprocesses of pid=878481
[2024-06-27 17:03:19] 2024-06-27 15:03:07,331 | INFO     | process IDs to be killed: [878481] (in reverse order)
[2024-06-27 17:03:19] 2024-06-27 15:03:07,397 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 17:03:19] 2024-06-27 15:03:07,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 17:03:19] 2024-06-27 15:03:07,402 | INFO     | did not find any defunct processes belonging to 878481
[2024-06-27 17:03:19] 2024-06-27 15:03:07,406 | INFO     | did not find any defunct processes belonging to 878481
[2024-06-27 17:03:19] 2024-06-27 15:03:07,407 | INFO     | ready for new job
[2024-06-27 17:03:19] 2024-06-27 15:03:07,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 17:03:19] 2024-06-27 15:03:07,409 | INFO     | *************************************
[2024-06-27 17:03:19] 2024-06-27 15:03:07,409 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 17:03:19] 2024-06-27 15:03:07,409 | INFO     | *************************************
[2024-06-27 17:03:19] 2024-06-27 15:03:07,409 | INFO     | 
[2024-06-27 17:03:19] 2024-06-27 15:03:07,411 | INFO     | architecture information:
[2024-06-27 17:03:19] 2024-06-27 15:03:07,412 | INFO     | executing command: cat /etc/os-release
[2024-06-27 17:03:19] 2024-06-27 15:03:07,427 | INFO     | cat /etc/os-release:
[2024-06-27 17:03:19] NAME="CentOS Linux"
[2024-06-27 17:03:19] VERSION="7 (Core)"
[2024-06-27 17:03:19] ID="centos"
[2024-06-27 17:03:19] ID_LIKE="rhel fedora"
[2024-06-27 17:03:19] VERSION_ID="7"
[2024-06-27 17:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 17:03:19] ANSI_COLOR="0;31"
[2024-06-27 17:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 17:03:19] HOME_URL="https://www.centos.org/"
[2024-06-27 17:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 17:03:19] 
[2024-06-27 17:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 17:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 17:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 17:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 17:03:19] 
[2024-06-27 17:03:19] 2024-06-27 15:03:07,427 | INFO     | *************************************
[2024-06-27 17:03:19] 2024-06-27 15:03:07,930 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-27 17:03:19] 2024-06-27 15:03:07,951 | INFO     | sufficient remaining disk space (1671830700032 B)
[2024-06-27 17:03:19] 2024-06-27 15:03:07,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 17:03:19] 2024-06-27 15:03:07,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 17:03:19] 2024-06-27 15:03:07,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 17:03:19] 2024-06-27 15:03:07,952 | INFO     | aborting loop
[2024-06-27 17:03:19] 2024-06-27 15:03:08,019 | INFO     | all job control threads have been joined
[2024-06-27 17:03:19] 2024-06-27 15:03:08,118 | INFO     | all data control threads have been joined
[2024-06-27 17:03:19] 2024-06-27 15:03:08,709 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 17:03:19] 2024-06-27 15:03:08,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 17:03:19] 2024-06-27 15:03:08,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 17:03:19] 2024-06-27 15:03:08,721 | INFO     | all payload control threads have been joined
[2024-06-27 17:03:19] 2024-06-27 15:03:08,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 17:03:19] 2024-06-27 15:03:08,957 | INFO     | [job] retrieve thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:08,958 | INFO     | [job] job monitor thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:08,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 17:03:19] 2024-06-27 15:03:09,024 | INFO     | [job] control thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,115 | INFO     | [payload] validate_post thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,124 | INFO     | [data] control thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,465 | INFO     | [data] copytool_in thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,726 | INFO     | [payload] control thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,765 | INFO     | [job] validate thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:09,828 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:10,087 | INFO     | [payload] failed_post thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:10,100 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:10,147 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:10,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 17:03:19] 2024-06-27 15:03:10,346 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:10,898 | INFO     | [data] copytool_out thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:11,203 | INFO     | [job] queue monitor thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:12,974 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 17:03:19] 2024-06-27 15:03:14,163 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47723400172608)>', '<ExcThread(monitor, started 47723584648960)>']
[2024-06-27 17:03:19] 2024-06-27 15:03:14,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 17:03:19] 2024-06-27 15:03:14,739 | INFO     | [monitor] control thread has ended
[2024-06-27 17:03:19] 2024-06-27 15:03:19,166 | INFO     | all workflow threads have been joined
[2024-06-27 17:03:19] 2024-06-27 15:03:19,168 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 17:03:19] 2024-06-27 15:03:19,168 | INFO     | traces error code: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:19,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 17:03:19] 2024-06-27 15:03:19,260 [wrapper] ==== pilot stdout END ====
[2024-06-27 17:03:19] 2024-06-27 15:03:19,263 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 17:03:19] 2024-06-27 15:03:19,266 [wrapper] pilotpid: 871591
[2024-06-27 17:03:19] 2024-06-27 15:03:19,268 [wrapper] Pilot exit status: 0
[2024-06-27 17:03:19] 2024-06-27 15:03:19,278 [wrapper] pandaids: 6246090437
[2024-06-27 17:03:19] 2024-06-27 15:03:19,326 [wrapper] cleanup supervisor_pilot  976581 871592
[2024-06-27 17:03:19] 2024-06-27 15:03:19,329 [wrapper] Test setup, not cleaning
[2024-06-27 17:03:19] 2024-06-27 15:03:19,333 [wrapper] ==== wrapper stdout END ====
[2024-06-27 17:03:19] 2024-06-27 15:03:19,336 [wrapper] ==== wrapper stderr END ====
[2024-06-27 17:03:19] 2024-06-27 15:03:19,341 [wrapper] apfmon messages muted
[2024-06-27 17:03:19]  *** Error codes and diagnostics ***
[2024-06-27 17:03:19]     "exeErrorCode": 0,
[2024-06-27 17:03:19]     "exeErrorDiag": "",
[2024-06-27 17:03:19]     "pilotErrorCode": 0,
[2024-06-27 17:03:19]     "pilotErrorDiag": "",
[2024-06-27 17:03:19]  *** Listing of results directory ***
[2024-06-27 17:03:19] total 550676
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc    469766 Jun 27 14:41 pilot3.tar.gz
[2024-06-27 17:03:19] -rwx------ 1 boinc boinc     32220 Jun 27 14:41 runpilot2-wrapper.sh
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc      5654 Jun 27 14:41 queuedata.json
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc       100 Jun 27 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 17:03:19] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 14:51 run_atlas
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc       105 Jun 27 14:51 job.xml
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc      6456 Jun 27 14:51 init_data.xml
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc 389611355 Jun 27 14:51 EVNT.34668224._000001.pool.root.1
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc     17537 Jun 27 14:51 start_atlas.sh
[2024-06-27 17:03:19] drwxrwx--x 2 boinc boinc      4096 Jun 27 14:51 shared
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc    482505 Jun 27 14:51 input.tar.gz
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc         0 Jun 27 14:51 boinc_lockfile
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc      2594 Jun 27 14:52 pandaJob.out
[2024-06-27 17:03:19] -rw------- 1 boinc boinc       424 Jun 27 14:52 setup.sh.local
[2024-06-27 17:03:19] -rw------- 1 boinc boinc   1034827 Jun 27 14:52 agis_schedconf.cvmfs.json
[2024-06-27 17:03:19] -rw------- 1 boinc boinc         0 Jun 27 14:52 agis_ddmendpoints.agis.ALL.json
[2024-06-27 17:03:19] -rw------- 1 boinc boinc   1321363 Jun 27 14:52 cric_ddmendpoints.json
[2024-06-27 17:03:19] drwx------ 4 boinc boinc      4096 Jun 27 14:52 pilot3
[2024-06-27 17:03:19] -rw------- 1 boinc boinc 168605824 Jun 27 17:02 HITS.40102775._000020.pool.root.1
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc       529 Jun 27 17:02 boinc_task_state.xml
[2024-06-27 17:03:19] -rw------- 1 boinc boinc      1040 Jun 27 17:02 memory_monitor_summary.json
[2024-06-27 17:03:19] -rw------- 1 boinc boinc    281756 Jun 27 17:02 log.40102775._000020.job.log.tgz.1
[2024-06-27 17:03:19] -rw------- 1 boinc boinc        95 Jun 27 17:03 pilot_heartbeat.json
[2024-06-27 17:03:19] -rw------- 1 boinc boinc      7766 Jun 27 17:03 heartbeat.json
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc        27 Jun 27 17:03 wrapper_checkpoint.txt
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc      8192 Jun 27 17:03 boinc_mmap_file
[2024-06-27 17:03:19] -rw------- 1 boinc boinc      4222 Jun 27 17:03 pilotlog.txt
[2024-06-27 17:03:19] -rw------- 1 boinc boinc    785532 Jun 27 17:03 log.40102775._000020.job.log.1
[2024-06-27 17:03:19] -rw------- 1 boinc boinc       357 Jun 27 17:03 output.list
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc       620 Jun 27 17:03 runtime_log
[2024-06-27 17:03:19] -rw------- 1 boinc boinc   1085440 Jun 27 17:03 result.tar.gz
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc     11409 Jun 27 17:03 runtime_log.err
[2024-06-27 17:03:19] -rw------- 1 boinc boinc       654 Jun 27 17:03 hVqNDmTc3g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm4HZKDmOkChHm.diag
[2024-06-27 17:03:19] -rw-r--r-- 1 boinc boinc     21250 Jun 27 17:03 stderr.txt
[2024-06-27 17:03:19] HITS file was successfully produced:
[2024-06-27 17:03:19] -rw------- 1 boinc boinc 168605824 Jun 27 17:02 shared/HITS.pool.root.1
[2024-06-27 17:03:19]  *** Contents of shared directory: ***
[2024-06-27 17:03:19] total 546696
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc 389611355 Jun 27 14:51 ATLAS.root_0
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc     17537 Jun 27 14:51 start_atlas.sh
[2024-06-27 17:03:19] -rw-r--r-- 2 boinc boinc    482505 Jun 27 14:51 input.tar.gz
[2024-06-27 17:03:19] -rw------- 1 boinc boinc 168605824 Jun 27 17:02 HITS.pool.root.1
[2024-06-27 17:03:19] -rw------- 1 boinc boinc   1085440 Jun 27 17:03 result.tar.gz
17:03:21 (867191): run_atlas exited; CPU time 28141.170163
17:03:21 (867191): called boinc_finish(0)

</stderr_txt>
]]>

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