Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:17 (5582): wrapper (7.7.26015): starting
08:49:17 (5582): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:49:17] Arguments: --nthreads 8
[2024-06-27 08:49:17] Threads: 8
[2024-06-27 08:49:17] Checking for CVMFS
[2024-06-27 08:49:17] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:49:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:49:17] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:49:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:49:17] 2.11.2.0 5300 16835 147132 134351 3 382 12799868 18431967 20753 130560 0 514217 96.960 3269656 53130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:49:17] CVMFS is ok
[2024-06-27 08:49:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:49:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:49:17] Further information can be found at the LHC@home message board.
[2024-06-27 08:49:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:49:17] Checking for apptainer binary...
[2024-06-27 08:49:17] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:49:17] Running /usr/bin/apptainer --version
[2024-06-27 08:49:17] apptainer version 1.3.2-1.el7
[2024-06-27 08:49:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:49:18] c-212-10.aglt2.org
[2024-06-27 08:49:18] apptainer works
[2024-06-27 08:49:18] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:49:18] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:49:18] Starting ATLAS job with PandaID=6246089761
[2024-06-27 08:49:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 13:06:27]  *** The last 200 lines of the pilot log: ***
[2024-06-27 13:06:27] 2024-06-27 17:05:51,129 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 13:06:27] 2024-06-27 17:05:51,129 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 13:06:27] 2024-06-27 17:05:51,176 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 13:06:27] 2024-06-27 17:05:53,222 | INFO     | monitor loop #1090: job 0:6246089761 is in state 'finished'
[2024-06-27 13:06:27] 2024-06-27 17:05:53,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:06:27] 2024-06-27 17:05:55,728 | INFO     | monitor loop #1091: job 0:6246089761 is in state 'finished'
[2024-06-27 13:06:27] 2024-06-27 17:05:55,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:06:27] 2024-06-27 17:05:58,233 | INFO     | monitor loop #1092: job 0:6246089761 is in state 'finished'
[2024-06-27 13:06:27] 2024-06-27 17:05:58,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:06:27] 2024-06-27 17:06:00,737 | INFO     | monitor loop #1093: job 0:6246089761 is in state 'finished'
[2024-06-27 13:06:27] 2024-06-27 17:06:00,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:06:27] 2024-06-27 17:06:03,240 | INFO     | monitor loop #1094: job 0:6246089761 is in state 'finished'
[2024-06-27 13:06:27] 2024-06-27 17:06:03,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,624 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 13:06:27] 2024-06-27 17:06:05,624 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6246089761/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,625 | INFO     | extracted standard info from prmon json
[2024-06-27 13:06:27] 2024-06-27 17:06:05,625 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 13:06:27] 2024-06-27 17:06:05,625 | WARNING  | GPU info not found in prmon json
[2024-06-27 13:06:27] 2024-06-27 17:06:05,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 13:06:27] 2024-06-27 17:06:05,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 13:06:27] 2024-06-27 17:06:05,629 | INFO     | fitting pss+swap vs Time
[2024-06-27 13:06:27] 2024-06-27 17:06:05,629 | INFO     | model: linear, x: [1719492637.0, 1719492698.0, 1719492759.0, 1719492820.0, 1719492881.0, 1719492942.0, 1719493003.0, 1719493064.0, 1719493125.0, 1719493186.0, 1719
[2024-06-27 13:06:27] 2024-06-27 17:06:05,630 | INFO     | sum of square deviations: 4903377416.326722
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | sum of deviations: 407811635591.2312
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | mean x: 1719500262.0517929
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | mean y: 2248658.597609562
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | -- intersect: -143007794160.46158
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | intersect: -143007794160.46158
[2024-06-27 13:06:27] 2024-06-27 17:06:05,631 | INFO     | chi2: 14.570786532794356
[2024-06-27 13:06:27] 2024-06-27 17:06:05,632 | INFO     | model: linear, x: [1719492637.0, 1719492698.0, 1719492759.0, 1719492820.0, 1719492881.0, 1719492942.0, 1719493003.0, 1719493064.0, 1719493125.0, 1719493186.0, 1719
[2024-06-27 13:06:27] 2024-06-27 17:06:05,632 | INFO     | sum of square deviations: 4616148088.813038
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | sum of deviations: 398032400531.77264
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | mean x: 1719500109.5528455
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | mean y: 2243465.825203252
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | -- intersect: -148263527725.22665
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | intersect: -148263527725.22665
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | chi2: 14.47297558416969
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | current chi2=14.47297558416969 (change=0.6712811858476105 %)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,633 | INFO     | right removable region: 245
[2024-06-27 13:06:27] 2024-06-27 17:06:05,634 | INFO     | model: linear, x: [1719492942.0, 1719493003.0, 1719493064.0, 1719493125.0, 1719493186.0, 1719493247.0, 1719493308.0, 1719493369.0, 1719493430.0, 1719493491.0, 1719
[2024-06-27 13:06:27] 2024-06-27 17:06:05,634 | INFO     | sum of square deviations: 4616140158.813038
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | sum of deviations: 337965135618.92676
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | mean x: 1719500414.5528455
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | mean y: 2285681.8902439023
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | -- intersect: -125888863808.37593
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | intersect: -125888863808.37593
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | chi2: 11.079403288415703
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | current chi2=11.079403288415703 (change=23.961529026045532 %)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,635 | INFO     | left removable region: 10
[2024-06-27 13:06:27] 2024-06-27 17:06:05,636 | INFO     | model: linear, x: [1719493247.0, 1719493308.0, 1719493369.0, 1719493430.0, 1719493491.0, 1719493552.0, 1719493613.0, 1719493674.0, 1719493735.0, 1719493796.0, 1719
[2024-06-27 13:06:27] 2024-06-27 17:06:05,636 | INFO     | sum of square deviations: 4024176364.280848
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | sum of deviations: 275010126157.6554
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | mean x: 1719500384.055319
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | mean y: 2311099.795744681
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | -- intersect: -117507453567.71219
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | intersect: -117507453567.71219
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | chi2: 9.2159803312453
[2024-06-27 13:06:27] 2024-06-27 17:06:05,637 | INFO     | -- intersect: -117507453567.71219
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | current memory leak: 68.34 B/s (using 235 data points, chi2=9.22)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | ..............................
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . Timing measurements:
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . get job = 0 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . initial setup = 2 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . payload setup = 14 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . stage-in = 0 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . payload execution = 15322 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . stage-out = 1 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | . log creation = 0 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,638 | INFO     | ..............................
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | 
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | job summary report
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | --------------------------------------------------
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | PanDA job id: 6246089761
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | task id: 40102733
[2024-06-27 13:06:27] 2024-06-27 17:06:05,897 | INFO     | errors: (none)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | pilot state: finished 
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | transexitcode: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | exeerrorcode: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | exeerrordiag: 
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | exitcode: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | exitmsg: OK
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | cpuconsumptiontime: 41718 s
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | nevents: 400
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | neventsw: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | pid: 69341
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | pgrp: 69341
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | corecount: 8
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | event service: False
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | sizes: {0: 2386987, 10: 2387193, 11: 2387221, 15340: 2417932, 15342: 2426892, 15345: 2426948, 15362: 2427246}
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | --------------------------------------------------
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | 
[2024-06-27 13:06:27] 2024-06-27 17:06:05,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 13:06:27] 2024-06-27 17:06:05,925 | INFO     | job 6246089761 has completed (purged errors)
[2024-06-27 13:06:27] 2024-06-27 17:06:05,926 | INFO     | overall cleanup function is called
[2024-06-27 13:06:27] 2024-06-27 17:06:06,932 | INFO     | --- collectZombieJob: --- 10, [69341]
[2024-06-27 13:06:27] 2024-06-27 17:06:06,932 | INFO     | zombie collector waiting for pid 69341
[2024-06-27 13:06:27] 2024-06-27 17:06:06,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 13:06:27] 2024-06-27 17:06:07,938 | INFO     | collected zombie processes
[2024-06-27 13:06:27] 2024-06-27 17:06:07,938 | INFO     | will now attempt to kill all subprocesses of pid=69341
[2024-06-27 13:06:27] 2024-06-27 17:06:08,375 | INFO     | process IDs to be killed: [69341] (in reverse order)
[2024-06-27 13:06:27] 2024-06-27 17:06:08,843 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 13:06:27] 2024-06-27 17:06:08,844 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 13:06:27] 2024-06-27 17:06:08,855 | INFO     | did not find any defunct processes belonging to 69341
[2024-06-27 13:06:27] 2024-06-27 17:06:08,888 | INFO     | did not find any defunct processes belonging to 69341
[2024-06-27 13:06:27] 2024-06-27 17:06:08,888 | INFO     | ready for new job
[2024-06-27 13:06:27] 2024-06-27 17:06:08,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 13:06:27] 2024-06-27 17:06:08,889 | INFO     | *************************************
[2024-06-27 13:06:27] 2024-06-27 17:06:08,890 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 13:06:27] 2024-06-27 17:06:08,890 | INFO     | *************************************
[2024-06-27 13:06:27] 2024-06-27 17:06:08,890 | INFO     | 
[2024-06-27 13:06:27] 2024-06-27 17:06:08,894 | INFO     | architecture information:
[2024-06-27 13:06:27] 2024-06-27 17:06:08,894 | INFO     | executing command: cat /etc/os-release
[2024-06-27 13:06:27] 2024-06-27 17:06:08,952 | INFO     | cat /etc/os-release:
[2024-06-27 13:06:27] NAME="CentOS Linux"
[2024-06-27 13:06:27] VERSION="7 (Core)"
[2024-06-27 13:06:27] ID="centos"
[2024-06-27 13:06:27] ID_LIKE="rhel fedora"
[2024-06-27 13:06:27] VERSION_ID="7"
[2024-06-27 13:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 13:06:27] ANSI_COLOR="0;31"
[2024-06-27 13:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 13:06:27] HOME_URL="https://www.centos.org/"
[2024-06-27 13:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 13:06:27] 
[2024-06-27 13:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 13:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 13:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 13:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 13:06:27] 
[2024-06-27 13:06:27] 2024-06-27 17:06:08,953 | INFO     | *************************************
[2024-06-27 13:06:27] 2024-06-27 17:06:09,458 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-27 13:06:27] 2024-06-27 17:06:09,477 | INFO     | sufficient remaining disk space (102833848320 B)
[2024-06-27 13:06:27] 2024-06-27 17:06:09,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 13:06:27] 2024-06-27 17:06:09,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 13:06:27] 2024-06-27 17:06:09,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 13:06:27] 2024-06-27 17:06:09,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:06:27] 2024-06-27 17:06:09,479 | INFO     | aborting loop
[2024-06-27 13:06:27] 2024-06-27 17:06:09,631 | INFO     | all data control threads have been joined
[2024-06-27 13:06:27] 2024-06-27 17:06:10,273 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 13:06:27] 2024-06-27 17:06:10,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 13:06:27] 2024-06-27 17:06:10,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 13:06:27] 2024-06-27 17:06:10,484 | INFO     | [job] retrieve thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,485 | INFO     | [job] job monitor thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,510 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,525 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,639 | INFO     | [data] control thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,692 | INFO     | [payload] validate_post thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:10,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:06:27] 2024-06-27 17:06:10,904 | INFO     | all payload control threads have been joined
[2024-06-27 13:06:27] 2024-06-27 17:06:10,940 | INFO     | [job] validate thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,085 | INFO     | [payload] failed_post thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,181 | INFO     | all job control threads have been joined
[2024-06-27 13:06:27] 2024-06-27 17:06:11,203 | INFO     | [data] copytool_in thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,219 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,485 | INFO     | [data] copytool_out thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,727 | INFO     | [job] queue monitor thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:11,909 | INFO     | [payload] control thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:12,189 | INFO     | [job] control thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:12,761 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 13:06:27] 2024-06-27 17:06:16,771 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:20,423 | INFO     | job.realtimelogging is not enabled
[2024-06-27 13:06:27] 2024-06-27 17:06:21,429 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 13:06:27] 2024-06-27 17:06:21,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132645365568)>', '<ExcThread(monitor, started 140132208330496)>']
[2024-06-27 13:06:27] 2024-06-27 17:06:22,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 13:06:27] 2024-06-27 17:06:22,363 | INFO     | [monitor] control thread has ended
[2024-06-27 13:06:27] 2024-06-27 17:06:26,696 | INFO     | all workflow threads have been joined
[2024-06-27 13:06:27] 2024-06-27 17:06:26,696 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 13:06:27] 2024-06-27 17:06:26,696 | INFO     | traces error code: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:26,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 13:06:27] 2024-06-27 17:06:27,041 [wrapper] ==== pilot stdout END ====
[2024-06-27 13:06:27] 2024-06-27 17:06:27,079 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 13:06:27] 2024-06-27 17:06:27,086 [wrapper] pilotpid: 28796
[2024-06-27 13:06:27] 2024-06-27 17:06:27,099 [wrapper] Pilot exit status: 0
[2024-06-27 13:06:27] 2024-06-27 17:06:27,167 [wrapper] pandaids: 6246089761
[2024-06-27 13:06:27] 2024-06-27 17:06:27,303 [wrapper] cleanup supervisor_pilot 23909 28797
[2024-06-27 13:06:27] 2024-06-27 17:06:27,311 [wrapper] Test setup, not cleaning
[2024-06-27 13:06:27] 2024-06-27 17:06:27,317 [wrapper] ==== wrapper stdout END ====
[2024-06-27 13:06:27] 2024-06-27 17:06:27,335 [wrapper] ==== wrapper stderr END ====
[2024-06-27 13:06:27] 2024-06-27 17:06:27,393 [wrapper] apfmon messages muted
[2024-06-27 13:06:27]  *** Error codes and diagnostics ***
[2024-06-27 13:06:27]     "exeErrorCode": 0,
[2024-06-27 13:06:27]     "exeErrorDiag": "",
[2024-06-27 13:06:27]     "pilotErrorCode": 0,
[2024-06-27 13:06:27]     "pilotErrorDiag": "",
[2024-06-27 13:06:27]  *** Listing of results directory ***
[2024-06-27 13:06:27] total 576544
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 13:06:27] -rwx------ 1 boincer umatlas     32220 Jun 27 08:40 runpilot2-wrapper.sh
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:41 pilot3.tar.gz
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 13:06:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:49 run_atlas
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:49 job.xml
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas 397006785 Jun 27 08:49 EVNT.34667889._000001.pool.root.1
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:49 start_atlas.sh
[2024-06-27 13:06:27] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:49 shared
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas    482492 Jun 27 08:49 input.tar.gz
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:49 boinc_lockfile
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas      2578 Jun 27 08:49 pandaJob.out
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas       467 Jun 27 08:49 setup.sh.local
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas   1034827 Jun 27 08:49 agis_schedconf.cvmfs.json
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas   1321363 Jun 27 08:49 cric_ddmendpoints.json
[2024-06-27 13:06:27] drwx------ 4 boincer umatlas      4096 Jun 27 08:49 pilot3
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas      6389 Jun 27 13:04 init_data.xml
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas 186323288 Jun 27 13:05 HITS.40102733._000004.pool.root.1
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas       530 Jun 27 13:05 boinc_task_state.xml
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas      1079 Jun 27 13:05 memory_monitor_summary.json
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas         0 Jun 27 13:05 agis_ddmendpoints.agis.ALL.json
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas    396252 Jun 27 13:05 log.40102733._000004.job.log.tgz.1
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas        95 Jun 27 13:05 pilot_heartbeat.json
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas      7746 Jun 27 13:06 heartbeat.json
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 13:06 boinc_mmap_file
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas        28 Jun 27 13:06 wrapper_checkpoint.txt
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas      4284 Jun 27 13:06 pilotlog.txt
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas   1357370 Jun 27 13:06 log.40102733._000004.job.log.1
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas       357 Jun 27 13:06 output.list
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas       620 Jun 27 13:06 runtime_log
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas   1771520 Jun 27 13:06 result.tar.gz
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas       650 Jun 27 13:06 YQULDmwb3g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmdGZKDmC4qPtn.diag
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 13:06 runtime_log.err
[2024-06-27 13:06:27] -rw-r--r-- 1 boincer umatlas     21886 Jun 27 13:06 stderr.txt
[2024-06-27 13:06:27] HITS file was successfully produced:
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas 186323288 Jun 27 13:05 shared/HITS.pool.root.1
[2024-06-27 13:06:27]  *** Contents of shared directory: ***
[2024-06-27 13:06:27] total 571892
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas 397006785 Jun 27 08:49 ATLAS.root_0
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:49 start_atlas.sh
[2024-06-27 13:06:27] -rw-r--r-- 2 boincer umatlas    482492 Jun 27 08:49 input.tar.gz
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas 186323288 Jun 27 13:05 HITS.pool.root.1
[2024-06-27 13:06:27] -rw------- 1 boincer umatlas   1771520 Jun 27 13:06 result.tar.gz
13:06:29 (5582): run_atlas exited; CPU time 40707.780434
13:06:29 (5582): called boinc_finish(0)

</stderr_txt>
]]>

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