Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:24 (11876): wrapper (7.7.26015): starting
08:46:24 (11876): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:46:24] Arguments: --nthreads 8
[2024-06-27 08:46:24] Threads: 8
[2024-06-27 08:46:24] Checking for CVMFS
[2024-06-27 08:46:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:46:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:46:25] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:46:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:46:25] 2.11.2.0 16934 8359 176372 134351 1 168 14083656 18432001 11735 130560 0 77063802 99.602 56104116 43037 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:46:25] CVMFS is ok
[2024-06-27 08:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:46:25] Further information can be found at the LHC@home message board.
[2024-06-27 08:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:46:25] Checking for apptainer binary...
[2024-06-27 08:46:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:46:25] Running /usr/bin/apptainer --version
[2024-06-27 08:46:25] apptainer version 1.3.2-1.el7
[2024-06-27 08:46:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:46:26] c-211-40.aglt2.org
[2024-06-27 08:46:26] apptainer works
[2024-06-27 08:46:26] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:46:26] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:46:26] Starting ATLAS job with PandaID=6246090080
[2024-06-27 08:46:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 12:19:14]  *** The last 200 lines of the pilot log: ***
[2024-06-27 12:19:14] 2024-06-27 16:18:51,063 | INFO     | stage-out finished correctly
[2024-06-27 12:19:14] 2024-06-27 16:18:52,641 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 12:19:14] 2024-06-27 16:18:52,870 | INFO     | job 6246090080 has state=finished
[2024-06-27 12:19:14] 2024-06-27 16:18:52,870 | INFO     | preparing for final server update for job 6246090080 in state='finished'
[2024-06-27 12:19:14] 2024-06-27 16:18:52,871 | INFO     | this job has now completed (state=finished)
[2024-06-27 12:19:14] 2024-06-27 16:18:52,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 12:19:14] 2024-06-27 16:18:52,871 | INFO     | job 6246090080 has finished - writing final server update
[2024-06-27 12:19:14] 2024-06-27 16:18:52,871 | INFO     | total number of processed events: 400 (read)
[2024-06-27 12:19:14] 2024-06-27 16:18:52,875 | INFO     | executing command: lscpu
[2024-06-27 12:19:14] 2024-06-27 16:18:52,916 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-27 12:19:14] 2024-06-27 16:18:52,916 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 12:19:14] 2024-06-27 16:18:52,952 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 12:19:14] 2024-06-27 16:18:57,232 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 12:19:14] 2024-06-27 16:18:57,232 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6246090080/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,237 | INFO     | extracted standard info from prmon json
[2024-06-27 12:19:14] 2024-06-27 16:18:57,237 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 12:19:14] 2024-06-27 16:18:57,237 | WARNING  | GPU info not found in prmon json
[2024-06-27 12:19:14] 2024-06-27 16:18:57,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 12:19:14] 2024-06-27 16:18:57,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 12:19:14] 2024-06-27 16:18:57,241 | INFO     | fitting pss+swap vs Time
[2024-06-27 12:19:14] 2024-06-27 16:18:57,241 | INFO     | model: linear, x: [1719492421.0, 1719492482.0, 1719492543.0, 1719492604.0, 1719492665.0, 1719492726.0, 1719492787.0, 1719492848.0, 1719492909.0, 1719492970.0, 1719
[2024-06-27 12:19:14] 2024-06-27 16:18:57,241 | INFO     | sum of square deviations: 2830787129.6172223
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | sum of deviations: 297748877475.23895
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | mean x: 1719498765.0813396
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | mean y: 2210027.5741626793
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | -- intersect: -180858732063.91333
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | intersect: -180858732063.91333
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | chi2: 14.334920001893655
[2024-06-27 12:19:14] 2024-06-27 16:18:57,243 | INFO     | model: linear, x: [1719492421.0, 1719492482.0, 1719492543.0, 1719492604.0, 1719492665.0, 1719492726.0, 1719492787.0, 1719492848.0, 1719492909.0, 1719492970.0, 1719
[2024-06-27 12:19:14] 2024-06-27 16:18:57,244 | INFO     | sum of square deviations: 2632444409.583331
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | sum of deviations: 302673629362.16656
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | mean x: 1719498612.5833333
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | mean y: 2213606.8725490198
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | -- intersect: -197702582687.83246
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | intersect: -197702582687.83246
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | chi2: 13.329777541584438
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | current chi2=13.329777541584438 (change=7.01184562018091 %)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | right removable region: 203
[2024-06-27 12:19:14] 2024-06-27 16:18:57,245 | INFO     | model: linear, x: [1719492726.0, 1719492787.0, 1719492848.0, 1719492909.0, 1719492970.0, 1719493031.0, 1719493092.0, 1719493153.0, 1719493214.0, 1719493275.0, 1719
[2024-06-27 12:19:14] 2024-06-27 16:18:57,246 | INFO     | sum of square deviations: 2632434039.583331
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | sum of deviations: 242456705536.75003
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | mean x: 1719498917.5833333
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | mean y: 2252442.9264705884
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | -- intersect: -158369823157.96924
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | intersect: -158369823157.96924
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | chi2: 11.20144864448499
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | current chi2=11.20144864448499 (change=21.859008330668956 %)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,247 | INFO     | left removable region: 10
[2024-06-27 12:19:14] 2024-06-27 16:18:57,248 | INFO     | model: linear, x: [1719493031.0, 1719493092.0, 1719493153.0, 1719493214.0, 1719493275.0, 1719493336.0, 1719493397.0, 1719493458.0, 1719493519.0, 1719493580.0, 1719
[2024-06-27 12:19:14] 2024-06-27 16:18:57,248 | INFO     | sum of square deviations: 2229141933.5025973
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | sum of deviations: 204856588265.3938
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | mean x: 1719498887.0880828
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | mean y: 2292188.3886010363
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | -- intersect: -158018455724.0259
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | intersect: -158018455724.0259
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | chi2: 8.704240079438245
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | -- intersect: -158018455724.0259
[2024-06-27 12:19:14] 2024-06-27 16:18:57,249 | INFO     | current memory leak: 91.90 B/s (using 193 data points, chi2=8.70)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | ..............................
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . Timing measurements:
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . get job = 0 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . initial setup = 1 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . payload setup = 6 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . stage-in = 0 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . payload execution = 12710 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . stage-out = 1 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | . log creation = 0 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,250 | INFO     | ..............................
[2024-06-27 12:19:14] 2024-06-27 16:18:57,375 | WARNING  | process 40128 is no longer using CPU - aborting
[2024-06-27 12:19:14] 2024-06-27 16:18:57,375 | INFO     | aborting job monitoring since job object (job id=6246090080) has expired
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | 
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | job summary report
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | --------------------------------------------------
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | PanDA job id: 6246090080
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | task id: 40102755
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | errors: (none)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 12:19:14] 2024-06-27 16:18:57,439 | INFO     | pilot state: finished 
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | transexitcode: 0
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | exeerrorcode: 0
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | exeerrordiag: 
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | exitcode: 0
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | exitmsg: OK
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | cpuconsumptiontime: 41004 s
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | nevents: 400
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | neventsw: 0
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | pid: 40128
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | pgrp: 40128
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | corecount: 8
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | event service: False
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | sizes: {0: 2387005, 3: 2387211, 11: 2387239, 12720: 2416995, 12722: 2425955, 12723: 2426011, 12728: 2426309}
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | --------------------------------------------------
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | 
[2024-06-27 12:19:14] 2024-06-27 16:18:57,440 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-27 12:19:14] 2024-06-27 16:18:57,459 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,460 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,461 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 12:19:14] 2024-06-27 16:18:57,461 | INFO     | job 6246090080 has completed (purged errors)
[2024-06-27 12:19:14] 2024-06-27 16:18:57,461 | INFO     | overall cleanup function is called
[2024-06-27 12:19:14] 2024-06-27 16:18:58,469 | INFO     | --- collectZombieJob: --- 10, [40128]
[2024-06-27 12:19:14] 2024-06-27 16:18:58,469 | INFO     | zombie collector waiting for pid 40128
[2024-06-27 12:19:14] 2024-06-27 16:18:58,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 12:19:14] 2024-06-27 16:18:59,475 | INFO     | collected zombie processes
[2024-06-27 12:19:14] 2024-06-27 16:18:59,475 | INFO     | will now attempt to kill all subprocesses of pid=40128
[2024-06-27 12:19:14] 2024-06-27 16:18:59,627 | INFO     | process IDs to be killed: [40128] (in reverse order)
[2024-06-27 12:19:14] 2024-06-27 16:18:59,723 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 12:19:14] 2024-06-27 16:18:59,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 12:19:14] 2024-06-27 16:18:59,731 | INFO     | did not find any defunct processes belonging to 40128
[2024-06-27 12:19:14] 2024-06-27 16:18:59,738 | INFO     | did not find any defunct processes belonging to 40128
[2024-06-27 12:19:14] 2024-06-27 16:18:59,738 | INFO     | ready for new job
[2024-06-27 12:19:14] 2024-06-27 16:18:59,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 12:19:14] 2024-06-27 16:18:59,740 | INFO     | *************************************
[2024-06-27 12:19:14] 2024-06-27 16:18:59,740 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 12:19:14] 2024-06-27 16:18:59,740 | INFO     | *************************************
[2024-06-27 12:19:14] 2024-06-27 16:18:59,740 | INFO     | 
[2024-06-27 12:19:14] 2024-06-27 16:18:59,743 | INFO     | architecture information:
[2024-06-27 12:19:14] 2024-06-27 16:18:59,743 | INFO     | executing command: cat /etc/os-release
[2024-06-27 12:19:14] 2024-06-27 16:18:59,758 | INFO     | cat /etc/os-release:
[2024-06-27 12:19:14] NAME="CentOS Linux"
[2024-06-27 12:19:14] VERSION="7 (Core)"
[2024-06-27 12:19:14] ID="centos"
[2024-06-27 12:19:14] ID_LIKE="rhel fedora"
[2024-06-27 12:19:14] VERSION_ID="7"
[2024-06-27 12:19:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 12:19:14] ANSI_COLOR="0;31"
[2024-06-27 12:19:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 12:19:14] HOME_URL="https://www.centos.org/"
[2024-06-27 12:19:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 12:19:14] 
[2024-06-27 12:19:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 12:19:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 12:19:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 12:19:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 12:19:14] 
[2024-06-27 12:19:14] 2024-06-27 16:18:59,759 | INFO     | *************************************
[2024-06-27 12:19:14] 2024-06-27 16:19:00,261 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-27 12:19:14] 2024-06-27 16:19:00,431 | INFO     | sufficient remaining disk space (76423364608 B)
[2024-06-27 12:19:14] 2024-06-27 16:19:00,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 12:19:14] 2024-06-27 16:19:00,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 12:19:14] 2024-06-27 16:19:00,543 | INFO     | all payload control threads have been joined
[2024-06-27 12:19:14] 2024-06-27 16:19:00,737 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 12:19:14] 2024-06-27 16:19:00,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 12:19:14] 2024-06-27 16:19:00,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 12:19:14] 2024-06-27 16:19:00,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:19:14] 2024-06-27 16:19:00,883 | INFO     | aborting loop
[2024-06-27 12:19:14] 2024-06-27 16:19:01,092 | INFO     | all job control threads have been joined
[2024-06-27 12:19:14] 2024-06-27 16:19:01,253 | INFO     | all data control threads have been joined
[2024-06-27 12:19:14] 2024-06-27 16:19:01,437 | INFO     | [job] retrieve thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,548 | INFO     | [payload] control thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,620 | INFO     | [job] validate thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 12:19:14] 2024-06-27 16:19:01,774 | INFO     | [data] copytool_in thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,791 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,823 | INFO     | [payload] validate_post thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:01,888 | INFO     | [job] job monitor thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,014 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,097 | INFO     | [job] control thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,258 | INFO     | [data] control thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:19:14] 2024-06-27 16:19:02,409 | INFO     | [payload] failed_post thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,453 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:02,549 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:03,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 12:19:14] 2024-06-27 16:19:03,343 | INFO     | [job] queue monitor thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:03,625 | INFO     | [data] copytool_out thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:07,235 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 12:19:14] 2024-06-27 16:19:08,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816577918784)>', '<ExcThread(monitor, started 139816016541440)>']
[2024-06-27 12:19:14] 2024-06-27 16:19:08,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 12:19:14] 2024-06-27 16:19:08,771 | INFO     | [monitor] control thread has ended
[2024-06-27 12:19:14] 2024-06-27 16:19:13,769 | INFO     | all workflow threads have been joined
[2024-06-27 12:19:14] 2024-06-27 16:19:13,769 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 12:19:14] 2024-06-27 16:19:13,769 | INFO     | traces error code: 0
[2024-06-27 12:19:14] 2024-06-27 16:19:13,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 12:19:14] 2024-06-27 16:19:13,851 [wrapper] ==== pilot stdout END ====
[2024-06-27 12:19:14] 2024-06-27 16:19:13,853 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 12:19:14] 2024-06-27 16:19:13,855 [wrapper] pilotpid: 20751
[2024-06-27 12:19:14] 2024-06-27 16:19:13,856 [wrapper] Pilot exit status: 0
[2024-06-27 12:19:14] 2024-06-27 16:19:13,864 [wrapper] pandaids: 6246090080
[2024-06-27 12:19:14] 2024-06-27 16:19:13,923 [wrapper] cleanup supervisor_pilot 25129 20752
[2024-06-27 12:19:14] 2024-06-27 16:19:13,926 [wrapper] Test setup, not cleaning
[2024-06-27 12:19:14] 2024-06-27 16:19:13,928 [wrapper] ==== wrapper stdout END ====
[2024-06-27 12:19:14] 2024-06-27 16:19:13,929 [wrapper] ==== wrapper stderr END ====
[2024-06-27 12:19:14] 2024-06-27 16:19:13,937 [wrapper] apfmon messages muted
[2024-06-27 12:19:14]  *** Error codes and diagnostics ***
[2024-06-27 12:19:14]     "exeErrorCode": 0,
[2024-06-27 12:19:14]     "exeErrorDiag": "",
[2024-06-27 12:19:14]     "pilotErrorCode": 0,
[2024-06-27 12:19:14]     "pilotErrorDiag": "",
[2024-06-27 12:19:14]  *** Listing of results directory ***
[2024-06-27 12:19:14] total 572960
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 12:19:14] -rwx------ 1 boincer umatlas     32220 Jun 27 08:40 runpilot2-wrapper.sh
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 12:19:14] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:46 run_atlas
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:46 job.xml
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas 392761452 Jun 27 08:46 EVNT.34668052._000001.pool.root.1
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 12:19:14] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:46 shared
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas    482494 Jun 27 08:46 input.tar.gz
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:46 boinc_lockfile
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas      2594 Jun 27 08:46 pandaJob.out
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas       467 Jun 27 08:46 setup.sh.local
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas   1034827 Jun 27 08:46 agis_schedconf.cvmfs.json
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas   1321363 Jun 27 08:46 cric_ddmendpoints.json
[2024-06-27 12:19:14] drwx------ 4 boincer umatlas      4096 Jun 27 08:46 pilot3
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas      6339 Jun 27 12:10 init_data.xml
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas 187413955 Jun 27 12:18 HITS.40102755._000025.pool.root.1
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas        95 Jun 27 12:18 pilot_heartbeat.json
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas       530 Jun 27 12:18 boinc_task_state.xml
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas      1090 Jun 27 12:18 memory_monitor_summary.json
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas         0 Jun 27 12:18 agis_ddmendpoints.agis.ALL.json
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas    391780 Jun 27 12:18 log.40102755._000025.job.log.tgz.1
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas      7739 Jun 27 12:18 heartbeat.json
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas        28 Jun 27 12:19 wrapper_checkpoint.txt
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 12:19 boinc_mmap_file
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas      4211 Jun 27 12:19 pilotlog.txt
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas   1103845 Jun 27 12:19 log.40102755._000025.job.log.1
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas       357 Jun 27 12:19 output.list
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas       620 Jun 27 12:19 runtime_log
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas   1515520 Jun 27 12:19 result.tar.gz
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 12:19 runtime_log.err
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas       650 Jun 27 12:19 J6ZLDmcb3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmrzrKDmOyAA9m.diag
[2024-06-27 12:19:14] -rw-r--r-- 1 boincer umatlas     21738 Jun 27 12:19 stderr.txt
[2024-06-27 12:19:14] HITS file was successfully produced:
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas 187413955 Jun 27 12:18 shared/HITS.pool.root.1
[2024-06-27 12:19:14]  *** Contents of shared directory: ***
[2024-06-27 12:19:14] total 568560
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas 392761452 Jun 27 08:46 ATLAS.root_0
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 12:19:14] -rw-r--r-- 2 boincer umatlas    482494 Jun 27 08:46 input.tar.gz
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas 187413955 Jun 27 12:18 HITS.pool.root.1
[2024-06-27 12:19:14] -rw------- 1 boincer umatlas   1515520 Jun 27 12:19 result.tar.gz
12:19:15 (11876): run_atlas exited; CPU time 39940.448065
12:19:15 (11876): called boinc_finish(0)

</stderr_txt>
]]>

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