Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:46 (27226): wrapper (7.7.26015): starting
08:46:46 (27226): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:46:46] Arguments: --nthreads 8
[2024-06-27 08:46:46] Threads: 8
[2024-06-27 08:46:46] Checking for CVMFS
[2024-06-27 08:46:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:46:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:46:46] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:46:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:46:46] 2.11.2.0 16934 8359 177768 134351 1 168 14127694 18432000 11995 130560 0 77101264 99.602 56125867 43046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:46:46] CVMFS is ok
[2024-06-27 08:46:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:46:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:46:46] Further information can be found at the LHC@home message board.
[2024-06-27 08:46:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:46:46] Checking for apptainer binary...
[2024-06-27 08:46:46] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:46:46] Running /usr/bin/apptainer --version
[2024-06-27 08:46:46] apptainer version 1.3.2-1.el7
[2024-06-27 08:46:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:46:46] c-211-40.aglt2.org
[2024-06-27 08:46:46] apptainer works
[2024-06-27 08:46:46] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:46:46] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:46:46] Starting ATLAS job with PandaID=6246090073
[2024-06-27 08:46:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 12:15:39]  *** The last 200 lines of the pilot log: ***
[2024-06-27 12:15:39] 2024-06-27 16:15:08,309 | INFO     | total number of processed events: 400 (read)
[2024-06-27 12:15:39] 2024-06-27 16:15:08,351 | INFO     | executing command: lscpu
[2024-06-27 12:15:39] 2024-06-27 16:15:08,507 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-27 12:15:39] 2024-06-27 16:15:08,508 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 12:15:39] 2024-06-27 16:15:08,581 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 12:15:39] 2024-06-27 16:15:09,721 | INFO     | monitor loop #876: job 0:6246090073 is in state 'finished'
[2024-06-27 12:15:39] 2024-06-27 16:15:09,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:15:39] 2024-06-27 16:15:12,224 | INFO     | monitor loop #877: job 0:6246090073 is in state 'finished'
[2024-06-27 12:15:39] 2024-06-27 16:15:12,225 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:15:39] 2024-06-27 16:15:14,728 | INFO     | monitor loop #878: job 0:6246090073 is in state 'finished'
[2024-06-27 12:15:39] 2024-06-27 16:15:14,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,232 | INFO     | monitor loop #879: job 0:6246090073 is in state 'finished'
[2024-06-27 12:15:39] 2024-06-27 16:15:17,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,360 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 12:15:39] 2024-06-27 16:15:17,361 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6246090073/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,362 | INFO     | extracted standard info from prmon json
[2024-06-27 12:15:39] 2024-06-27 16:15:17,362 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 12:15:39] 2024-06-27 16:15:17,362 | WARNING  | GPU info not found in prmon json
[2024-06-27 12:15:39] 2024-06-27 16:15:17,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 12:15:39] 2024-06-27 16:15:17,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 12:15:39] 2024-06-27 16:15:17,366 | INFO     | fitting pss+swap vs Time
[2024-06-27 12:15:39] 2024-06-27 16:15:17,367 | INFO     | model: linear, x: [1719492438.0, 1719492499.0, 1719492560.0, 1719492621.0, 1719492682.0, 1719492743.0, 1719492804.0, 1719492865.0, 1719492926.0, 1719492987.0, 1719
[2024-06-27 12:15:39] 2024-06-27 16:15:17,367 | INFO     | sum of square deviations: 2671329336.4097424
[2024-06-27 12:15:39] 2024-06-27 16:15:17,368 | INFO     | sum of deviations: 289249831300.4586
[2024-06-27 12:15:39] 2024-06-27 16:15:17,368 | INFO     | mean x: 1719498660.0536585
[2024-06-27 12:15:39] 2024-06-27 16:15:17,368 | INFO     | mean y: 2207791.3219512193
[2024-06-27 12:15:39] 2024-06-27 16:15:17,368 | INFO     | -- intersect: -186184006900.7017
[2024-06-27 12:15:39] 2024-06-27 16:15:17,368 | INFO     | intersect: -186184006900.7017
[2024-06-27 12:15:39] 2024-06-27 16:15:17,369 | INFO     | chi2: 14.28891866057602
[2024-06-27 12:15:39] 2024-06-27 16:15:17,369 | INFO     | model: linear, x: [1719492438.0, 1719492499.0, 1719492560.0, 1719492621.0, 1719492682.0, 1719492743.0, 1719492804.0, 1719492865.0, 1719492926.0, 1719492987.0, 1719
[2024-06-27 12:15:39] 2024-06-27 16:15:17,369 | INFO     | sum of square deviations: 2480594231.395006
[2024-06-27 12:15:39] 2024-06-27 16:15:17,370 | INFO     | sum of deviations: 294201221576.89484
[2024-06-27 12:15:39] 2024-06-27 16:15:17,370 | INFO     | mean x: 1719498507.555
[2024-06-27 12:15:39] 2024-06-27 16:15:17,370 | INFO     | mean y: 2211535.055
[2024-06-27 12:15:39] 2024-06-27 16:15:17,370 | INFO     | -- intersect: -203932214748.6983
[2024-06-27 12:15:39] 2024-06-27 16:15:17,370 | INFO     | intersect: -203932214748.6983
[2024-06-27 12:15:39] 2024-06-27 16:15:17,371 | INFO     | chi2: 13.268070664413992
[2024-06-27 12:15:39] 2024-06-27 16:15:17,371 | INFO     | current chi2=13.268070664413992 (change=7.1443334545573975 %)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,371 | INFO     | right removable region: 199
[2024-06-27 12:15:39] 2024-06-27 16:15:17,371 | INFO     | model: linear, x: [1719492743.0, 1719492804.0, 1719492865.0, 1719492926.0, 1719492987.0, 1719493048.0, 1719493109.0, 1719493170.0, 1719493231.0, 1719493292.0, 1719
[2024-06-27 12:15:39] 2024-06-27 16:15:17,371 | INFO     | sum of square deviations: 2480587521.395006
[2024-06-27 12:15:39] 2024-06-27 16:15:17,372 | INFO     | sum of deviations: 235057785055.9348
[2024-06-27 12:15:39] 2024-06-27 16:15:17,372 | INFO     | mean x: 1719498812.555
[2024-06-27 12:15:39] 2024-06-27 16:15:17,372 | INFO     | mean y: 2251019.415
[2024-06-27 12:15:39] 2024-06-27 16:15:17,372 | INFO     | -- intersect: -162935592858.06653
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | intersect: -162935592858.06653
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | chi2: 11.165914000374658
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | current chi2=11.165914000374658 (change=21.856130155026484 %)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | left removable region: 10
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | model: linear, x: [1719493048.0, 1719493109.0, 1719493170.0, 1719493231.0, 1719493292.0, 1719493353.0, 1719493414.0, 1719493475.0, 1719493536.0, 1719493597.0, 1719
[2024-06-27 12:15:39] 2024-06-27 16:15:17,373 | INFO     | sum of square deviations: 2093380932.359791
[2024-06-27 12:15:39] 2024-06-27 16:15:17,374 | INFO     | sum of deviations: 198383231153.4497
[2024-06-27 12:15:39] 2024-06-27 16:15:17,374 | INFO     | mean x: 1719498782.058201
[2024-06-27 12:15:39] 2024-06-27 16:15:17,374 | INFO     | mean y: 2291704.3227513228
[2024-06-27 12:15:39] 2024-06-27 16:15:17,374 | INFO     | -- intersect: -162949285371.80722
[2024-06-27 12:15:39] 2024-06-27 16:15:17,375 | INFO     | intersect: -162949285371.80722
[2024-06-27 12:15:39] 2024-06-27 16:15:17,375 | INFO     | chi2: 8.668553187908879
[2024-06-27 12:15:39] 2024-06-27 16:15:17,375 | INFO     | -- intersect: -162949285371.80722
[2024-06-27 12:15:39] 2024-06-27 16:15:17,375 | INFO     | current memory leak: 94.77 B/s (using 189 data points, chi2=8.67)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,375 | INFO     | ..............................
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . Timing measurements:
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . get job = 0 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . initial setup = 1 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . payload setup = 3 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . stage-in = 0 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . payload execution = 12464 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . stage-out = 1 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | . log creation = 0 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,376 | INFO     | ..............................
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | 
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | job summary report
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | --------------------------------------------------
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | PanDA job id: 6246090073
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | task id: 40102755
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | errors: (none)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | pilot state: finished 
[2024-06-27 12:15:39] 2024-06-27 16:15:17,923 | INFO     | transexitcode: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | exeerrorcode: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | exeerrordiag: 
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | exitcode: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | exitmsg: OK
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | cpuconsumptiontime: 41776 s
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | nevents: 400
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | neventsw: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | pid: 61419
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | pgrp: 61419
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | corecount: 8
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | event service: False
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | sizes: {0: 2387005, 4: 2387211, 11: 2387239, 12472: 2417027, 12474: 2425987, 12475: 2426043, 12487: 2426341}
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | --------------------------------------------------
[2024-06-27 12:15:39] 2024-06-27 16:15:17,924 | INFO     | 
[2024-06-27 12:15:39] 2024-06-27 16:15:17,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-27 12:15:39] 2024-06-27 16:15:17,987 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | job 6246090073 has completed (purged errors)
[2024-06-27 12:15:39] 2024-06-27 16:15:17,989 | INFO     | overall cleanup function is called
[2024-06-27 12:15:39] 2024-06-27 16:15:19,000 | INFO     | --- collectZombieJob: --- 10, [61419]
[2024-06-27 12:15:39] 2024-06-27 16:15:19,000 | INFO     | zombie collector waiting for pid 61419
[2024-06-27 12:15:39] 2024-06-27 16:15:19,000 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 12:15:39] 2024-06-27 16:15:20,005 | INFO     | collected zombie processes
[2024-06-27 12:15:39] 2024-06-27 16:15:20,005 | INFO     | will now attempt to kill all subprocesses of pid=61419
[2024-06-27 12:15:39] 2024-06-27 16:15:20,155 | INFO     | process IDs to be killed: [61419] (in reverse order)
[2024-06-27 12:15:39] 2024-06-27 16:15:20,269 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 12:15:39] 2024-06-27 16:15:20,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 12:15:39] 2024-06-27 16:15:20,279 | INFO     | did not find any defunct processes belonging to 61419
[2024-06-27 12:15:39] 2024-06-27 16:15:20,286 | INFO     | did not find any defunct processes belonging to 61419
[2024-06-27 12:15:39] 2024-06-27 16:15:20,287 | INFO     | ready for new job
[2024-06-27 12:15:39] 2024-06-27 16:15:20,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 12:15:39] 2024-06-27 16:15:20,288 | INFO     | *************************************
[2024-06-27 12:15:39] 2024-06-27 16:15:20,289 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 12:15:39] 2024-06-27 16:15:20,289 | INFO     | *************************************
[2024-06-27 12:15:39] 2024-06-27 16:15:20,289 | INFO     | 
[2024-06-27 12:15:39] 2024-06-27 16:15:20,292 | INFO     | architecture information:
[2024-06-27 12:15:39] 2024-06-27 16:15:20,301 | INFO     | executing command: cat /etc/os-release
[2024-06-27 12:15:39] 2024-06-27 16:15:20,535 | INFO     | cat /etc/os-release:
[2024-06-27 12:15:39] NAME="CentOS Linux"
[2024-06-27 12:15:39] VERSION="7 (Core)"
[2024-06-27 12:15:39] ID="centos"
[2024-06-27 12:15:39] ID_LIKE="rhel fedora"
[2024-06-27 12:15:39] VERSION_ID="7"
[2024-06-27 12:15:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 12:15:39] ANSI_COLOR="0;31"
[2024-06-27 12:15:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 12:15:39] HOME_URL="https://www.centos.org/"
[2024-06-27 12:15:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 12:15:39] 
[2024-06-27 12:15:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 12:15:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 12:15:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 12:15:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 12:15:39] 
[2024-06-27 12:15:39] 2024-06-27 16:15:20,535 | INFO     | *************************************
[2024-06-27 12:15:39] 2024-06-27 16:15:21,038 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-27 12:15:39] 2024-06-27 16:15:21,052 | INFO     | sufficient remaining disk space (76025954304 B)
[2024-06-27 12:15:39] 2024-06-27 16:15:21,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 12:15:39] 2024-06-27 16:15:21,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 12:15:39] 2024-06-27 16:15:21,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:15:39] 2024-06-27 16:15:21,053 | INFO     | aborting loop
[2024-06-27 12:15:39] 2024-06-27 16:15:21,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 12:15:39] 2024-06-27 16:15:21,225 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 12:15:39] 2024-06-27 16:15:21,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 12:15:39] 2024-06-27 16:15:21,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 12:15:39] 2024-06-27 16:15:21,333 | INFO     | all payload control threads have been joined
[2024-06-27 12:15:39] 2024-06-27 16:15:21,647 | INFO     | all data control threads have been joined
[2024-06-27 12:15:39] 2024-06-27 16:15:21,905 | INFO     | all job control threads have been joined
[2024-06-27 12:15:39] 2024-06-27 16:15:22,059 | INFO     | [job] job monitor thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,062 | INFO     | [job] retrieve thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,177 | INFO     | [payload] failed_post thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 12:15:39] 2024-06-27 16:15:22,338 | INFO     | [payload] control thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,438 | INFO     | [data] copytool_in thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,482 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:15:39] 2024-06-27 16:15:22,643 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,653 | INFO     | [data] control thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,661 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,839 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,865 | INFO     | [payload] validate_post thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:22,910 | INFO     | [job] control thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:23,154 | INFO     | [job] validate thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:23,488 | INFO     | [job] queue monitor thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:24,250 | INFO     | [data] copytool_out thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:25,066 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:31,741 | INFO     | job.realtimelogging is not enabled
[2024-06-27 12:15:39] 2024-06-27 16:15:32,747 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 12:15:39] 2024-06-27 16:15:32,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675442861888)>', '<ExcThread(monitor, started 139674970461952)>']
[2024-06-27 12:15:39] 2024-06-27 16:15:33,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 12:15:39] 2024-06-27 16:15:33,289 | INFO     | [monitor] control thread has ended
[2024-06-27 12:15:39] 2024-06-27 16:15:37,885 | INFO     | all workflow threads have been joined
[2024-06-27 12:15:39] 2024-06-27 16:15:37,894 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 12:15:39] 2024-06-27 16:15:37,894 | INFO     | traces error code: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:37,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 12:15:39] 2024-06-27 16:15:38,135 [wrapper] ==== pilot stdout END ====
[2024-06-27 12:15:39] 2024-06-27 16:15:38,153 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 12:15:39] 2024-06-27 16:15:38,160 [wrapper] pilotpid: 38270
[2024-06-27 12:15:39] 2024-06-27 16:15:38,168 [wrapper] Pilot exit status: 0
[2024-06-27 12:15:39] 2024-06-27 16:15:38,263 [wrapper] pandaids: 6246090073
[2024-06-27 12:15:39] 2024-06-27 16:15:38,329 [wrapper] cleanup supervisor_pilot 47918 38271
[2024-06-27 12:15:39] 2024-06-27 16:15:38,333 [wrapper] Test setup, not cleaning
[2024-06-27 12:15:39] 2024-06-27 16:15:38,339 [wrapper] ==== wrapper stdout END ====
[2024-06-27 12:15:39] 2024-06-27 16:15:38,378 [wrapper] ==== wrapper stderr END ====
[2024-06-27 12:15:39] 2024-06-27 16:15:38,434 [wrapper] apfmon messages muted
[2024-06-27 12:15:39]  *** Error codes and diagnostics ***
[2024-06-27 12:15:39]     "exeErrorCode": 0,
[2024-06-27 12:15:39]     "exeErrorDiag": "",
[2024-06-27 12:15:39]     "pilotErrorCode": 0,
[2024-06-27 12:15:39]     "pilotErrorDiag": "",
[2024-06-27 12:15:39]  *** Listing of results directory ***
[2024-06-27 12:15:39] total 569028
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 12:15:39] -rwx------ 1 boincer umatlas     32220 Jun 27 08:40 runpilot2-wrapper.sh
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 12:15:39] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:46 run_atlas
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:46 job.xml
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas 392761452 Jun 27 08:46 EVNT.34668052._000001.pool.root.1
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 12:15:39] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:46 shared
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas    482493 Jun 27 08:46 input.tar.gz
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:46 boinc_lockfile
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas      2594 Jun 27 08:46 pandaJob.out
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas       467 Jun 27 08:46 setup.sh.local
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas   1034827 Jun 27 08:46 agis_schedconf.cvmfs.json
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas   1321363 Jun 27 08:46 cric_ddmendpoints.json
[2024-06-27 12:15:39] drwx------ 4 boincer umatlas      4096 Jun 27 08:46 pilot3
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas      6339 Jun 27 12:10 init_data.xml
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas 183440286 Jun 27 12:14 HITS.40102755._000021.pool.root.1
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas       531 Jun 27 12:14 boinc_task_state.xml
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas        95 Jun 27 12:14 pilot_heartbeat.json
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas      1074 Jun 27 12:14 memory_monitor_summary.json
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas         0 Jun 27 12:15 agis_ddmendpoints.agis.ALL.json
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas    386038 Jun 27 12:15 log.40102755._000021.job.log.tgz.1
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas      7731 Jun 27 12:15 heartbeat.json
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 12:15 boinc_mmap_file
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas        28 Jun 27 12:15 wrapper_checkpoint.txt
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas      4283 Jun 27 12:15 pilotlog.txt
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas   1082392 Jun 27 12:15 log.40102755._000021.job.log.1
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas       357 Jun 27 12:15 output.list
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas       620 Jun 27 12:15 runtime_log
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas   1484800 Jun 27 12:15 result.tar.gz
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas       649 Jun 27 12:15 sBYLDmcb3g5n7Olcko1bjSoqABFKDmABFKDmOtvXDmqzrKDm2sWeIm.diag
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 12:15 runtime_log.err
[2024-06-27 12:15:39] -rw-r--r-- 1 boincer umatlas     21794 Jun 27 12:15 stderr.txt
[2024-06-27 12:15:39] HITS file was successfully produced:
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas 183440286 Jun 27 12:14 shared/HITS.pool.root.1
[2024-06-27 12:15:39]  *** Contents of shared directory: ***
[2024-06-27 12:15:39] total 564652
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas 392761452 Jun 27 08:46 ATLAS.root_0
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 12:15:39] -rw-r--r-- 2 boincer umatlas    482493 Jun 27 08:46 input.tar.gz
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas 183440286 Jun 27 12:14 HITS.pool.root.1
[2024-06-27 12:15:39] -rw------- 1 boincer umatlas   1484800 Jun 27 12:15 result.tar.gz
12:15:40 (27226): run_atlas exited; CPU time 40758.437722
12:15:40 (27226): called boinc_finish(0)

</stderr_txt>
]]>

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