Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:20 (53909): wrapper (7.7.26015): starting
08:47:20 (53909): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:47:20] Arguments: --nthreads 8
[2024-06-27 08:47:20] Threads: 8
[2024-06-27 08:47:20] Checking for CVMFS
[2024-06-27 08:47:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:47:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:47:21] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:47:21] 2.11.2.0 47030 2323 206820 134351 2 839 17064701 18432001 15401 130560 0 18863158 99.237 26746588 55996 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:47:21] CVMFS is ok
[2024-06-27 08:47:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:47:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:47:21] Further information can be found at the LHC@home message board.
[2024-06-27 08:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:47:21] Checking for apptainer binary...
[2024-06-27 08:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:47:21] Running /usr/bin/apptainer --version
[2024-06-27 08:47:21] apptainer version 1.3.2-1.el7
[2024-06-27 08:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:47:27] c-210-40.aglt2.org
[2024-06-27 08:47:27] apptainer works
[2024-06-27 08:47:27] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:47:27] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:47:28] Starting ATLAS job with PandaID=6246089859
[2024-06-27 08:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 14:16:42]  *** The last 200 lines of the pilot log: ***
[2024-06-27 14:16:42] 2024-06-27 18:16:05,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:05,817 | INFO     | 19662s have passed since pilot start
[2024-06-27 14:16:42] 2024-06-27 18:16:07,961 | INFO     | monitor loop #1309: job 0:6246089859 is in state 'finished'
[2024-06-27 14:16:42] 2024-06-27 18:16:07,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:10,464 | INFO     | monitor loop #1310: job 0:6246089859 is in state 'finished'
[2024-06-27 14:16:42] 2024-06-27 18:16:10,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:12,965 | INFO     | monitor loop #1311: job 0:6246089859 is in state 'finished'
[2024-06-27 14:16:42] 2024-06-27 18:16:12,965 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:15,469 | INFO     | monitor loop #1312: job 0:6246089859 is in state 'finished'
[2024-06-27 14:16:42] 2024-06-27 18:16:15,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:17,971 | INFO     | monitor loop #1313: job 0:6246089859 is in state 'finished'
[2024-06-27 14:16:42] 2024-06-27 18:16:17,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 14:16:42] 2024-06-27 18:16:19,406 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 14:16:42] 2024-06-27 18:16:19,407 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6246089859/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 14:16:42] 2024-06-27 18:16:19,408 | INFO     | extracted standard info from prmon json
[2024-06-27 14:16:42] 2024-06-27 18:16:19,408 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 14:16:42] 2024-06-27 18:16:19,408 | WARNING  | GPU info not found in prmon json
[2024-06-27 14:16:42] 2024-06-27 18:16:19,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 14:16:42] 2024-06-27 18:16:19,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 14:16:42] 2024-06-27 18:16:19,418 | INFO     | fitting pss+swap vs Time
[2024-06-27 14:16:42] 2024-06-27 18:16:19,419 | INFO     | model: linear, x: [1719492655.0, 1719492716.0, 1719492777.0, 1719492838.0, 1719492899.0, 1719492960.0, 1719493021.0, 1719493082.0, 1719493143.0, 1719493204.0, 1719
[2024-06-27 14:16:42] 2024-06-27 18:16:19,419 | INFO     | sum of square deviations: 10160464470.246914
[2024-06-27 14:16:42] 2024-06-27 18:16:19,421 | INFO     | sum of deviations: 528946113279.7441
[2024-06-27 14:16:42] 2024-06-27 18:16:19,424 | INFO     | mean x: 1719502384.721875
[2024-06-27 14:16:42] 2024-06-27 18:16:19,425 | INFO     | mean y: 2285148.69375
[2024-06-27 14:16:42] 2024-06-27 18:16:19,425 | INFO     | -- intersect: -89513711471.0734
[2024-06-27 14:16:42] 2024-06-27 18:16:19,425 | INFO     | intersect: -89513711471.0734
[2024-06-27 14:16:42] 2024-06-27 18:16:19,425 | INFO     | chi2: 17.002978733975663
[2024-06-27 14:16:42] 2024-06-27 18:16:19,426 | INFO     | model: linear, x: [1719492655.0, 1719492716.0, 1719492777.0, 1719492838.0, 1719492899.0, 1719492960.0, 1719493021.0, 1719493082.0, 1719493143.0, 1719493204.0, 1719
[2024-06-27 14:16:42] 2024-06-27 18:16:19,426 | INFO     | sum of square deviations: 9691602914.996855
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | sum of deviations: 541505686123.4035
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | mean x: 1719502232.2253969
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | mean y: 2289141.3746031746
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | -- intersect: -96072657822.36401
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | intersect: -96072657822.36401
[2024-06-27 14:16:42] 2024-06-27 18:16:19,428 | INFO     | chi2: 16.10658987150919
[2024-06-27 14:16:42] 2024-06-27 18:16:19,429 | INFO     | current chi2=16.10658987150919 (change=5.271951912021701 %)
[2024-06-27 14:16:42] 2024-06-27 18:16:19,429 | INFO     | right removable region: 314
[2024-06-27 14:16:42] 2024-06-27 18:16:19,429 | INFO     | model: linear, x: [1719492960.0, 1719493021.0, 1719493082.0, 1719493143.0, 1719493204.0, 1719493265.0, 1719493326.0, 1719493387.0, 1719493448.0, 1719493509.0, 1719
[2024-06-27 14:16:42] 2024-06-27 18:16:19,429 | INFO     | sum of square deviations: 9691559604.996855
[2024-06-27 14:16:42] 2024-06-27 18:16:19,434 | INFO     | sum of deviations: 435058043786.1521
[2024-06-27 14:16:42] 2024-06-27 18:16:19,434 | INFO     | mean x: 1719502537.2253969
[2024-06-27 14:16:42] 2024-06-27 18:16:19,434 | INFO     | mean y: 2315653.180952381
[2024-06-27 14:16:42] 2024-06-27 18:16:19,434 | INFO     | -- intersect: -77186851067.19946
[2024-06-27 14:16:42] 2024-06-27 18:16:19,434 | INFO     | intersect: -77186851067.19946
[2024-06-27 14:16:42] 2024-06-27 18:16:19,435 | INFO     | chi2: 13.01396137053409
[2024-06-27 14:16:42] 2024-06-27 18:16:19,435 | INFO     | current chi2=13.01396137053409 (change=23.460697245187074 %)
[2024-06-27 14:16:42] 2024-06-27 18:16:19,435 | INFO     | left removable region: 10
[2024-06-27 14:16:42] 2024-06-27 18:16:19,435 | INFO     | model: linear, x: [1719493265.0, 1719493326.0, 1719493387.0, 1719493448.0, 1719493509.0, 1719493570.0, 1719493631.0, 1719493692.0, 1719493753.0, 1719493814.0, 1719
[2024-06-27 14:16:42] 2024-06-27 18:16:19,435 | INFO     | sum of square deviations: 8711266485.417774
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | sum of deviations: 376618713774.24615
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | mean x: 1719502506.7335527
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | mean y: 2344261.299342105
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | -- intersect: -74337801744.06364
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | intersect: -74337801744.06364
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | chi2: 10.077709573519302
[2024-06-27 14:16:42] 2024-06-27 18:16:19,441 | INFO     | -- intersect: -74337801744.06364
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | current memory leak: 43.23 B/s (using 304 data points, chi2=10.08)
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | ..............................
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . Timing measurements:
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . get job = 0 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . initial setup = 4 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . payload setup = 40 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . stage-in = 0 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,442 | INFO     | . payload execution = 19534 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,443 | INFO     | . stage-out = 2 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,443 | INFO     | . log creation = 0 s
[2024-06-27 14:16:42] 2024-06-27 18:16:19,443 | INFO     | ..............................
[2024-06-27 14:16:42] 2024-06-27 18:16:20,000 | INFO     | 
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | job summary report
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | --------------------------------------------------
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | PanDA job id: 6246089859
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | task id: 40102727
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | errors: (none)
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | pilot state: finished 
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | transexitcode: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | exeerrorcode: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | exeerrordiag: 
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | exitcode: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | exitmsg: OK
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | cpuconsumptiontime: 46189 s
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | nevents: 400
[2024-06-27 14:16:42] 2024-06-27 18:16:20,001 | INFO     | neventsw: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | pid: 17218
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | pgrp: 17218
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | corecount: 8
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | event service: False
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | sizes: {0: 2386836, 1: 2387035, 12: 2387035, 22: 2387063, 27: 2387297, 33: 2387325, 19579: 2420282, 19582: 2429298, 19614: 2429412}
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | --------------------------------------------------
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | 
[2024-06-27 14:16:42] 2024-06-27 18:16:20,002 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | job 6246089859 has completed (purged errors)
[2024-06-27 14:16:42] 2024-06-27 18:16:20,087 | INFO     | overall cleanup function is called
[2024-06-27 14:16:42] 2024-06-27 18:16:21,095 | INFO     | --- collectZombieJob: --- 10, [17218]
[2024-06-27 14:16:42] 2024-06-27 18:16:21,096 | INFO     | zombie collector waiting for pid 17218
[2024-06-27 14:16:42] 2024-06-27 18:16:21,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 14:16:42] 2024-06-27 18:16:22,101 | INFO     | collected zombie processes
[2024-06-27 14:16:42] 2024-06-27 18:16:22,101 | INFO     | will now attempt to kill all subprocesses of pid=17218
[2024-06-27 14:16:42] 2024-06-27 18:16:22,247 | INFO     | process IDs to be killed: [17218] (in reverse order)
[2024-06-27 14:16:42] 2024-06-27 18:16:22,600 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 14:16:42] 2024-06-27 18:16:22,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 14:16:42] 2024-06-27 18:16:22,609 | INFO     | did not find any defunct processes belonging to 17218
[2024-06-27 14:16:42] 2024-06-27 18:16:22,617 | INFO     | did not find any defunct processes belonging to 17218
[2024-06-27 14:16:42] 2024-06-27 18:16:22,617 | INFO     | ready for new job
[2024-06-27 14:16:42] 2024-06-27 18:16:22,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 14:16:42] 2024-06-27 18:16:22,619 | INFO     | *************************************
[2024-06-27 14:16:42] 2024-06-27 18:16:22,619 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 14:16:42] 2024-06-27 18:16:22,619 | INFO     | *************************************
[2024-06-27 14:16:42] 2024-06-27 18:16:22,619 | INFO     | 
[2024-06-27 14:16:42] 2024-06-27 18:16:22,622 | INFO     | architecture information:
[2024-06-27 14:16:42] 2024-06-27 18:16:22,625 | INFO     | executing command: cat /etc/os-release
[2024-06-27 14:16:42] 2024-06-27 18:16:22,769 | INFO     | cat /etc/os-release:
[2024-06-27 14:16:42] NAME="CentOS Linux"
[2024-06-27 14:16:42] VERSION="7 (Core)"
[2024-06-27 14:16:42] ID="centos"
[2024-06-27 14:16:42] ID_LIKE="rhel fedora"
[2024-06-27 14:16:42] VERSION_ID="7"
[2024-06-27 14:16:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 14:16:42] ANSI_COLOR="0;31"
[2024-06-27 14:16:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 14:16:42] HOME_URL="https://www.centos.org/"
[2024-06-27 14:16:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 14:16:42] 
[2024-06-27 14:16:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 14:16:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 14:16:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 14:16:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 14:16:42] 
[2024-06-27 14:16:42] 2024-06-27 18:16:22,769 | INFO     | *************************************
[2024-06-27 14:16:42] 2024-06-27 18:16:23,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2024-06-27 14:16:42] 2024-06-27 18:16:23,356 | INFO     | sufficient remaining disk space (75539415040 B)
[2024-06-27 14:16:42] 2024-06-27 18:16:23,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 14:16:42] 2024-06-27 18:16:23,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 14:16:42] 2024-06-27 18:16:23,357 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 14:16:42] 2024-06-27 18:16:23,357 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 14:16:42] 2024-06-27 18:16:23,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 14:16:42] 2024-06-27 18:16:23,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 14:16:42] 2024-06-27 18:16:23,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 14:16:42] 2024-06-27 18:16:23,637 | INFO     | all payload control threads have been joined
[2024-06-27 14:16:42] 2024-06-27 18:16:23,765 | INFO     | all data control threads have been joined
[2024-06-27 14:16:42] 2024-06-27 18:16:23,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 14:16:42] 2024-06-27 18:16:23,983 | INFO     | aborting loop
[2024-06-27 14:16:42] 2024-06-27 18:16:24,172 | INFO     | all job control threads have been joined
[2024-06-27 14:16:42] 2024-06-27 18:16:24,362 | INFO     | [job] retrieve thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,568 | INFO     | [payload] failed_post thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,600 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,645 | INFO     | [payload] control thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 14:16:42] 2024-06-27 18:16:24,773 | INFO     | [data] control thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,817 | INFO     | [payload] validate_post thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,960 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:24,988 | INFO     | [job] job monitor thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,178 | INFO     | [job] control thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,364 | INFO     | [data] copytool_out thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,508 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,523 | INFO     | [job] validate thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,712 | INFO     | [job] queue monitor thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:25,730 | INFO     | [data] copytool_in thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:26,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 14:16:42] 2024-06-27 18:16:30,041 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:33,911 | INFO     | job.realtimelogging is not enabled
[2024-06-27 14:16:42] 2024-06-27 18:16:34,917 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 14:16:42] 2024-06-27 18:16:35,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177936885568)>', '<ExcThread(monitor, started 140177129338624)>']
[2024-06-27 14:16:42] 2024-06-27 18:16:36,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 14:16:42] 2024-06-27 18:16:36,428 | INFO     | [monitor] control thread has ended
[2024-06-27 14:16:42] 2024-06-27 18:16:40,878 | INFO     | all workflow threads have been joined
[2024-06-27 14:16:42] 2024-06-27 18:16:40,879 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 14:16:42] 2024-06-27 18:16:40,879 | INFO     | traces error code: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:40,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 14:16:42] 2024-06-27 18:16:40,996 [wrapper] ==== pilot stdout END ====
[2024-06-27 14:16:42] 2024-06-27 18:16:41,000 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 14:16:42] 2024-06-27 18:16:41,007 [wrapper] pilotpid: 16237
[2024-06-27 14:16:42] 2024-06-27 18:16:41,011 [wrapper] Pilot exit status: 0
[2024-06-27 14:16:42] 2024-06-27 18:16:41,144 [wrapper] pandaids: 6246089859
[2024-06-27 14:16:42] 2024-06-27 18:16:41,504 [wrapper] cleanup supervisor_pilot 30510 16238
[2024-06-27 14:16:42] 2024-06-27 18:16:41,535 [wrapper] Test setup, not cleaning
[2024-06-27 14:16:42] 2024-06-27 18:16:41,577 [wrapper] ==== wrapper stdout END ====
[2024-06-27 14:16:42] 2024-06-27 18:16:41,621 [wrapper] ==== wrapper stderr END ====
[2024-06-27 14:16:42] 2024-06-27 18:16:41,638 [wrapper] apfmon messages muted
[2024-06-27 14:16:42]  *** Error codes and diagnostics ***
[2024-06-27 14:16:42]     "exeErrorCode": 0,
[2024-06-27 14:16:42]     "exeErrorDiag": "",
[2024-06-27 14:16:42]     "pilotErrorCode": 0,
[2024-06-27 14:16:42]     "pilotErrorDiag": "",
[2024-06-27 14:16:42]  *** Listing of results directory ***
[2024-06-27 14:16:42] total 585368
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 14:16:42] -rwx------ 1 boincer umatlas     32220 Jun 27 08:40 runpilot2-wrapper.sh
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:41 pilot3.tar.gz
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 14:16:42] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:47 run_atlas
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:47 job.xml
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas 394925870 Jun 27 08:47 EVNT.34667847._000003.pool.root.1
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 14:16:42] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:47 shared
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas    482506 Jun 27 08:47 input.tar.gz
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:47 boinc_lockfile
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas      2595 Jun 27 08:47 pandaJob.out
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas       467 Jun 27 08:47 setup.sh.local
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas   1034827 Jun 27 08:48 agis_schedconf.cvmfs.json
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas   1321363 Jun 27 08:48 cric_ddmendpoints.json
[2024-06-27 14:16:42] drwx------ 4 boincer umatlas      4096 Jun 27 08:48 pilot3
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas      6340 Jun 27 14:11 init_data.xml
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas 196734901 Jun 27 14:15 HITS.40102727._000032.pool.root.1
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas       531 Jun 27 14:15 boinc_task_state.xml
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas      1075 Jun 27 14:15 memory_monitor_summary.json
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas         0 Jun 27 14:15 agis_ddmendpoints.agis.ALL.json
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas    432230 Jun 27 14:15 log.40102727._000032.job.log.tgz.1
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas        95 Jun 27 14:16 pilot_heartbeat.json
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas      7734 Jun 27 14:16 heartbeat.json
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 14:16 boinc_mmap_file
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas        28 Jun 27 14:16 wrapper_checkpoint.txt
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas      4406 Jun 27 14:16 pilotlog.txt
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas   1674361 Jun 27 14:16 log.40102727._000032.job.log.1
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas       357 Jun 27 14:16 output.list
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas       620 Jun 27 14:16 runtime_log
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas   2129920 Jun 27 14:16 result.tar.gz
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 14:16 runtime_log.err
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas       649 Jun 27 14:16 glFLDmwb3g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmUGZKDmsK563n.diag
[2024-06-27 14:16:42] -rw-r--r-- 1 boincer umatlas     21825 Jun 27 14:16 stderr.txt
[2024-06-27 14:16:42] HITS file was successfully produced:
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas 196734901 Jun 27 14:15 shared/HITS.pool.root.1
[2024-06-27 14:16:42]  *** Contents of shared directory: ***
[2024-06-27 14:16:42] total 580372
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas 394925870 Jun 27 08:47 ATLAS.root_0
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 14:16:42] -rw-r--r-- 2 boincer umatlas    482506 Jun 27 08:47 input.tar.gz
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas 196734901 Jun 27 14:15 HITS.pool.root.1
[2024-06-27 14:16:42] -rw------- 1 boincer umatlas   2129920 Jun 27 14:16 result.tar.gz
14:16:43 (53909): run_atlas exited; CPU time 44808.007950
14:16:43 (53909): called boinc_finish(0)

</stderr_txt>
]]>

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