Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:08 (32937): wrapper (7.7.26015): starting
08:47:08 (32937): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:47:08] Arguments: --nthreads 8
[2024-06-27 08:47:08] Threads: 8
[2024-06-27 08:47:08] Checking for CVMFS
[2024-06-27 08:47:08] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:47:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:47:08] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:47:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:47:09] 2.11.2.0 93530 7653 98752 134351 2 495 14462072 18432000 20448 130560 0 30423108 99.001 48618667 56920 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:47:09] CVMFS is ok
[2024-06-27 08:47:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:47:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:47:09] Further information can be found at the LHC@home message board.
[2024-06-27 08:47:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:47:09] Checking for apptainer binary...
[2024-06-27 08:47:09] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:47:09] Running /usr/bin/apptainer --version
[2024-06-27 08:47:09] apptainer version 1.3.1-1.el7
[2024-06-27 08:47:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:47:13] c-212-20.aglt2.org
[2024-06-27 08:47:13] apptainer works
[2024-06-27 08:47:13] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:47:13] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:47:13] Starting ATLAS job with PandaID=6246088965
[2024-06-27 08:47:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 12:00:07]  *** The last 200 lines of the pilot log: ***
[2024-06-27 12:00:07] 2024-06-27 15:59:51,267 | INFO     | intersect: -98358944059.28754
[2024-06-27 12:00:07] 2024-06-27 15:59:51,268 | INFO     | chi2: 7.689368652285423
[2024-06-27 12:00:07] 2024-06-27 15:59:51,268 | INFO     | model: linear, x: [1719492646.0, 1719492707.0, 1719492768.0, 1719492829.0, 1719492890.0, 1719492951.0, 1719493012.0, 1719493073.0, 1719493134.0, 1719493195.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,268 | INFO     | sum of square deviations: 1838644559.8011048
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | sum of deviations: 123536144724.12158
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | mean x: 1719498136.0331492
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | mean y: 2370719.6464088396
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | -- intersect: -115528480228.96051
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | intersect: -115528480228.96051
[2024-06-27 12:00:07] 2024-06-27 15:59:51,269 | INFO     | chi2: 6.894116133793753
[2024-06-27 12:00:07] 2024-06-27 15:59:51,270 | INFO     | current chi2=6.894116133793753 (change=10.34223425164179 %)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,270 | INFO     | right removable region: 180
[2024-06-27 12:00:07] 2024-06-27 15:59:51,270 | INFO     | model: linear, x: [1719492951.0, 1719493012.0, 1719493073.0, 1719493134.0, 1719493195.0, 1719493256.0, 1719493317.0, 1719493378.0, 1719493439.0, 1719493500.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,270 | INFO     | sum of square deviations: 1838640899.8011048
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | sum of deviations: 61034490099.56352
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | mean x: 1719498441.0331492
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | mean y: 2413418.906077348
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | -- intersect: -57077090570.59264
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | intersect: -57077090570.59264
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | chi2: 4.10519410813121
[2024-06-27 12:00:07] 2024-06-27 15:59:51,271 | INFO     | current chi2=4.10519410813121 (change=46.612078393314256 %)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,272 | INFO     | model: linear, x: [1719493256.0, 1719493317.0, 1719493378.0, 1719493439.0, 1719493500.0, 1719493561.0, 1719493622.0, 1719493683.0, 1719493744.0, 1719493805.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,272 | INFO     | sum of square deviations: 1690431639.7954543
[2024-06-27 12:00:07] 2024-06-27 15:59:51,272 | INFO     | sum of deviations: 21790922396.4318
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | mean x: 1719498593.534091
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | mean y: 2453785.2613636362
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | -- intersect: -22163163285.777893
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | intersect: -22163163285.777893
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | chi2: 2.2907801594957933
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | current chi2=2.2907801594957933 (change=44.1980062536284 %)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | model: linear, x: [1719493561.0, 1719493622.0, 1719493683.0, 1719493744.0, 1719493805.0, 1719493866.0, 1719493927.0, 1719493988.0, 1719494049.0, 1719494110.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,273 | INFO     | sum of square deviations: 1550408579.7894788
[2024-06-27 12:00:07] 2024-06-27 15:59:51,274 | INFO     | sum of deviations: -10821224158.192986
[2024-06-27 12:00:07] 2024-06-27 15:59:51,274 | INFO     | mean x: 1719498746.0350878
[2024-06-27 12:00:07] 2024-06-27 15:59:51,274 | INFO     | mean y: 2489189.1988304094
[2024-06-27 12:00:07] 2024-06-27 15:59:51,274 | INFO     | -- intersect: 12003894246.634714
[2024-06-27 12:00:07] 2024-06-27 15:59:51,275 | INFO     | intersect: 12003894246.634714
[2024-06-27 12:00:07] 2024-06-27 15:59:51,275 | INFO     | chi2: 0.9445128477842569
[2024-06-27 12:00:07] 2024-06-27 15:59:51,275 | INFO     | current chi2=0.9445128477842569 (change=58.768944114124565 %)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,275 | INFO     | model: linear, x: [1719493866.0, 1719493927.0, 1719493988.0, 1719494049.0, 1719494110.0, 1719494171.0, 1719494232.0, 1719494293.0, 1719494354.0, 1719494415.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,275 | INFO     | sum of square deviations: 1418339157.283133
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | sum of deviations: -18890566004.75904
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | mean x: 1719498898.5361445
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | mean y: 2498507.626506024
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | -- intersect: 22904148843.59287
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | intersect: 22904148843.59287
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | chi2: 0.852779239961758
[2024-06-27 12:00:07] 2024-06-27 15:59:51,276 | INFO     | current chi2=0.852779239961758 (change=9.712266809043184 %)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,277 | INFO     | left removable region: 40
[2024-06-27 12:00:07] 2024-06-27 15:59:51,277 | INFO     | model: linear, x: [1719495086.0, 1719495147.0, 1719495208.0, 1719495269.0, 1719495330.0, 1719495391.0, 1719495452.0, 1719495513.0, 1719495574.0, 1719495635.0, 1719
[2024-06-27 12:00:07] 2024-06-27 15:59:51,277 | INFO     | sum of square deviations: 850806410.821431
[2024-06-27 12:00:07] 2024-06-27 15:59:51,277 | INFO     | sum of deviations: -8053806832.107147
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | mean x: 1719499325.5357144
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | mean y: 2514349.1214285716
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | -- intersect: 16279443201.165215
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | intersect: 16279443201.165215
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | chi2: 0.006667308259329446
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | -- intersect: 16279443201.165215
[2024-06-27 12:00:07] 2024-06-27 15:59:51,278 | INFO     | current memory leak: -9.47 B/s (using 140 data points, chi2=0.01)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | ..............................
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . Timing measurements:
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . get job = 0 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . initial setup = 3 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . payload setup = 40 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . stage-in = 0 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . payload execution = 11347 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . stage-out = 1 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | . log creation = 0 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,279 | INFO     | ..............................
[2024-06-27 12:00:07] 2024-06-27 15:59:51,362 | INFO     | 
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | job summary report
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | --------------------------------------------------
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | PanDA job id: 6246088965
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | task id: 40102675
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | errors: (none)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | pilot state: finished 
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | transexitcode: 0
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | exeerrorcode: 0
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | exeerrordiag: 
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | exitcode: 0
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | exitmsg: OK
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | cpuconsumptiontime: 35203 s
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | nevents: 400
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | neventsw: 0
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | pid: 86331
[2024-06-27 12:00:07] 2024-06-27 15:59:51,363 | INFO     | pgrp: 86331
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | corecount: 8
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | event service: False
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | sizes: {0: 2385501, 1: 2387037, 2: 2387037, 12: 2387065, 23: 2387093, 32: 2387327, 34: 2387483, 11391: 2416354, 11392: 2416353, 11394: 2425369, 11396: 2425425, 114
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | --------------------------------------------------
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | 
[2024-06-27 12:00:07] 2024-06-27 15:59:51,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-27 12:00:07] 2024-06-27 15:59:51,506 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,507 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,508 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,509 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 12:00:07] 2024-06-27 15:59:51,510 | INFO     | job 6246088965 has completed (purged errors)
[2024-06-27 12:00:07] 2024-06-27 15:59:51,510 | INFO     | overall cleanup function is called
[2024-06-27 12:00:07] 2024-06-27 15:59:52,518 | INFO     | --- collectZombieJob: --- 10, [86331]
[2024-06-27 12:00:07] 2024-06-27 15:59:52,518 | INFO     | zombie collector waiting for pid 86331
[2024-06-27 12:00:07] 2024-06-27 15:59:52,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 12:00:07] 2024-06-27 15:59:53,523 | INFO     | collected zombie processes
[2024-06-27 12:00:07] 2024-06-27 15:59:53,523 | INFO     | will now attempt to kill all subprocesses of pid=86331
[2024-06-27 12:00:07] 2024-06-27 15:59:53,833 | INFO     | process IDs to be killed: [86331] (in reverse order)
[2024-06-27 12:00:07] 2024-06-27 15:59:54,330 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 12:00:07] 2024-06-27 15:59:54,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 12:00:07] 2024-06-27 15:59:54,338 | INFO     | did not find any defunct processes belonging to 86331
[2024-06-27 12:00:07] 2024-06-27 15:59:54,346 | INFO     | did not find any defunct processes belonging to 86331
[2024-06-27 12:00:07] 2024-06-27 15:59:54,346 | INFO     | ready for new job
[2024-06-27 12:00:07] 2024-06-27 15:59:54,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 12:00:07] 2024-06-27 15:59:54,348 | INFO     | *************************************
[2024-06-27 12:00:07] 2024-06-27 15:59:54,348 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 12:00:07] 2024-06-27 15:59:54,348 | INFO     | *************************************
[2024-06-27 12:00:07] 2024-06-27 15:59:54,348 | INFO     | 
[2024-06-27 12:00:07] 2024-06-27 15:59:54,352 | INFO     | architecture information:
[2024-06-27 12:00:07] 2024-06-27 15:59:54,353 | INFO     | executing command: cat /etc/os-release
[2024-06-27 12:00:07] 2024-06-27 15:59:54,409 | INFO     | cat /etc/os-release:
[2024-06-27 12:00:07] NAME="CentOS Linux"
[2024-06-27 12:00:07] VERSION="7 (Core)"
[2024-06-27 12:00:07] ID="centos"
[2024-06-27 12:00:07] ID_LIKE="rhel fedora"
[2024-06-27 12:00:07] VERSION_ID="7"
[2024-06-27 12:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 12:00:07] ANSI_COLOR="0;31"
[2024-06-27 12:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 12:00:07] HOME_URL="https://www.centos.org/"
[2024-06-27 12:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 12:00:07] 
[2024-06-27 12:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 12:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 12:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 12:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 12:00:07] 
[2024-06-27 12:00:07] 2024-06-27 15:59:54,409 | INFO     | *************************************
[2024-06-27 12:00:07] 2024-06-27 15:59:54,913 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-27 12:00:07] 2024-06-27 15:59:55,089 | INFO     | sufficient remaining disk space (101797855232 B)
[2024-06-27 12:00:07] 2024-06-27 15:59:55,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 12:00:07] 2024-06-27 15:59:55,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 12:00:07] 2024-06-27 15:59:55,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:00:07] 2024-06-27 15:59:55,089 | INFO     | aborting loop
[2024-06-27 12:00:07] 2024-06-27 15:59:55,090 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 12:00:07] 2024-06-27 15:59:55,090 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 12:00:07] 2024-06-27 15:59:55,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 12:00:07] 2024-06-27 15:59:55,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 12:00:07] 2024-06-27 15:59:55,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 12:00:07] 2024-06-27 15:59:55,148 | INFO     | all payload control threads have been joined
[2024-06-27 12:00:07] 2024-06-27 15:59:55,642 | INFO     | all data control threads have been joined
[2024-06-27 12:00:07] 2024-06-27 15:59:56,094 | INFO     | [job] retrieve thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,099 | INFO     | [job] job monitor thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,154 | INFO     | [payload] control thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,174 | INFO     | [job] validate thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,198 | INFO     | [data] copytool_in thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,348 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:00:07] 2024-06-27 15:59:56,384 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,565 | INFO     | [payload] validate_post thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 12:00:07] 2024-06-27 15:59:56,648 | INFO     | [data] control thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:56,704 | INFO     | all job control threads have been joined
[2024-06-27 12:00:07] 2024-06-27 15:59:57,068 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:57,230 | INFO     | [payload] failed_post thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:57,284 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:57,384 | INFO     | [job] queue monitor thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:57,710 | INFO     | [job] control thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:58,594 | INFO     | [data] copytool_out thread has finished
[2024-06-27 12:00:07] 2024-06-27 15:59:59,134 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 12:00:07] 2024-06-27 16:00:01,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139722171246400)>', '<ExcThread(monitor, started 139721879557888)>']
[2024-06-27 12:00:07] 2024-06-27 16:00:01,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 12:00:07] 2024-06-27 16:00:01,128 | INFO     | [monitor] control thread has ended
[2024-06-27 12:00:07] 2024-06-27 16:00:06,040 | INFO     | all workflow threads have been joined
[2024-06-27 12:00:07] 2024-06-27 16:00:06,040 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 12:00:07] 2024-06-27 16:00:06,041 | INFO     | traces error code: 0
[2024-06-27 12:00:07] 2024-06-27 16:00:06,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 12:00:07] 2024-06-27 16:00:06,206 [wrapper] ==== pilot stdout END ====
[2024-06-27 12:00:07] 2024-06-27 16:00:06,209 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 12:00:07] 2024-06-27 16:00:06,211 [wrapper] pilotpid: 49949
[2024-06-27 12:00:07] 2024-06-27 16:00:06,213 [wrapper] Pilot exit status: 0
[2024-06-27 12:00:07] 2024-06-27 16:00:06,221 [wrapper] pandaids: 6246088965
[2024-06-27 12:00:07] 2024-06-27 16:00:06,296 [wrapper] cleanup supervisor_pilot 92944 49950
[2024-06-27 12:00:07] 2024-06-27 16:00:06,316 [wrapper] Test setup, not cleaning
[2024-06-27 12:00:07] 2024-06-27 16:00:06,318 [wrapper] ==== wrapper stdout END ====
[2024-06-27 12:00:07] 2024-06-27 16:00:06,364 [wrapper] ==== wrapper stderr END ====
[2024-06-27 12:00:07] 2024-06-27 16:00:06,434 [wrapper] apfmon messages muted
[2024-06-27 12:00:07]  *** Error codes and diagnostics ***
[2024-06-27 12:00:07]     "exeErrorCode": 0,
[2024-06-27 12:00:07]     "exeErrorDiag": "",
[2024-06-27 12:00:07]     "pilotErrorCode": 0,
[2024-06-27 12:00:07]     "pilotErrorDiag": "",
[2024-06-27 12:00:07]  *** Listing of results directory ***
[2024-06-27 12:00:07] total 567844
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 12:00:07] -rwx------ 1 boincer umatlas     32220 Jun 27 08:39 runpilot2-wrapper.sh
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 12:00:07] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:47 run_atlas
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:47 job.xml
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas 401072297 Jun 27 08:47 EVNT.34667534._000002.pool.root.1
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 12:00:07] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:47 shared
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas    482502 Jun 27 08:47 input.tar.gz
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:47 boinc_lockfile
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas      2597 Jun 27 08:47 pandaJob.out
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas       424 Jun 27 08:47 setup.sh.local
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas   1034827 Jun 27 08:48 agis_schedconf.cvmfs.json
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas   1321363 Jun 27 08:48 cric_ddmendpoints.json
[2024-06-27 12:00:07] drwx------ 4 boincer umatlas      4096 Jun 27 08:48 pilot3
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas      6303 Jun 27 11:58 init_data.xml
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas 173912349 Jun 27 11:58 HITS.40102675._000046.pool.root.1
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas       531 Jun 27 11:58 boinc_task_state.xml
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas      1095 Jun 27 11:59 memory_monitor_summary.json
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas        95 Jun 27 11:59 pilot_heartbeat.json
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas         0 Jun 27 11:59 agis_ddmendpoints.agis.ALL.json
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas    385233 Jun 27 11:59 log.40102675._000046.job.log.tgz.1
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas      7746 Jun 27 11:59 heartbeat.json
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas      4335 Jun 27 12:00 pilotlog.txt
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas   1082868 Jun 27 12:00 log.40102675._000046.job.log.1
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas       357 Jun 27 12:00 output.list
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas       620 Jun 27 12:00 runtime_log
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas   1484800 Jun 27 12:00 result.tar.gz
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas        28 Jun 27 12:00 wrapper_checkpoint.txt
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 12:00 boinc_mmap_file
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas     11000 Jun 27 12:00 runtime_log.err
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas       650 Jun 27 12:00 1SRLDmfa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmupoKDmooyYzn.diag
[2024-06-27 12:00:07] -rw-r--r-- 1 boincer umatlas     21657 Jun 27 12:00 stderr.txt
[2024-06-27 12:00:07] HITS file was successfully produced:
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas 173912349 Jun 27 11:58 shared/HITS.pool.root.1
[2024-06-27 12:00:07]  *** Contents of shared directory: ***
[2024-06-27 12:00:07] total 563468
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas 401072297 Jun 27 08:47 ATLAS.root_0
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 12:00:07] -rw-r--r-- 2 boincer umatlas    482502 Jun 27 08:47 input.tar.gz
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas 173912349 Jun 27 11:58 HITS.pool.root.1
[2024-06-27 12:00:07] -rw------- 1 boincer umatlas   1484800 Jun 27 12:00 result.tar.gz
12:00:09 (32937): run_atlas exited; CPU time 34431.552351
12:00:09 (32937): called boinc_finish(0)

</stderr_txt>
]]>

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