Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:47:59 (156555): wrapper (7.7.26015): starting
08:47:59 (156555): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:47:59] Arguments: --nthreads 8
[2024-06-27 08:47:59] Threads: 8
[2024-06-27 08:47:59] Checking for CVMFS
[2024-06-27 08:48:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:48:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:48:00] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:48:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:48:01] 2.11.2.0 276722 700 110552 134351 0 542 16086641 18432000 19839 130560 0 1457154 98.054 7158164 52301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:48:01] CVMFS is ok
[2024-06-27 08:48:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:48:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:48:01] Further information can be found at the LHC@home message board.
[2024-06-27 08:48:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:48:01] Checking for apptainer binary...
[2024-06-27 08:48:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:48:01] Running /usr/bin/apptainer --version
[2024-06-27 08:48:01] apptainer version 1.3.1-1.el7
[2024-06-27 08:48:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:48:03] c-211-35-3.aglt2.org
[2024-06-27 08:48:03] apptainer works
[2024-06-27 08:48:03] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:48:03] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:48:03] Starting ATLAS job with PandaID=6246088918
[2024-06-27 08:48:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 14:28:15]  *** The last 200 lines of the pilot log: ***
[2024-06-27 14:28:15] 2024-06-27 18:27:58,246 | INFO     | intersect: -30439452725.234314
[2024-06-27 14:28:15] 2024-06-27 18:27:58,246 | INFO     | chi2: 6.710738114092293
[2024-06-27 14:28:15] 2024-06-27 18:27:58,247 | INFO     | model: linear, x: [1719492546.0, 1719492607.0, 1719492668.0, 1719492729.0, 1719492790.0, 1719492851.0, 1719492912.0, 1719492973.0, 1719493034.0, 1719493095.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,247 | INFO     | sum of square deviations: 10942125492.631094
[2024-06-27 14:28:15] 2024-06-27 18:27:58,250 | INFO     | sum of deviations: 221551665122.16776
[2024-06-27 14:28:15] 2024-06-27 18:27:58,251 | INFO     | mean x: 1719502519.7164633
[2024-06-27 14:28:15] 2024-06-27 18:27:58,251 | INFO     | mean y: 2426464.7652439023
[2024-06-27 14:28:15] 2024-06-27 18:27:58,251 | INFO     | -- intersect: -34813354681.36581
[2024-06-27 14:28:15] 2024-06-27 18:27:58,251 | INFO     | intersect: -34813354681.36581
[2024-06-27 14:28:15] 2024-06-27 18:27:58,251 | INFO     | chi2: 5.952808785911377
[2024-06-27 14:28:15] 2024-06-27 18:27:58,252 | INFO     | current chi2=5.952808785911377 (change=11.294276654743738 %)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,252 | INFO     | right removable region: 327
[2024-06-27 14:28:15] 2024-06-27 18:27:58,252 | INFO     | model: linear, x: [1719492851.0, 1719492912.0, 1719492973.0, 1719493034.0, 1719493095.0, 1719493156.0, 1719493217.0, 1719493278.0, 1719493339.0, 1719493400.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,252 | INFO     | sum of square deviations: 10942082182.631102
[2024-06-27 14:28:15] 2024-06-27 18:27:58,256 | INFO     | sum of deviations: 110532913094.67688
[2024-06-27 14:28:15] 2024-06-27 18:27:58,256 | INFO     | mean x: 1719502824.7164633
[2024-06-27 14:28:15] 2024-06-27 18:27:58,256 | INFO     | mean y: 2448522.6524390243
[2024-06-27 14:28:15] 2024-06-27 18:27:58,256 | INFO     | -- intersect: -17367340254.124466
[2024-06-27 14:28:15] 2024-06-27 18:27:58,256 | INFO     | intersect: -17367340254.124466
[2024-06-27 14:28:15] 2024-06-27 18:27:58,257 | INFO     | chi2: 3.6189130235033344
[2024-06-27 14:28:15] 2024-06-27 18:27:58,257 | INFO     | current chi2=3.6189130235033344 (change=46.072802097525525 %)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,258 | INFO     | model: linear, x: [1719493156.0, 1719493217.0, 1719493278.0, 1719493339.0, 1719493400.0, 1719493461.0, 1719493522.0, 1719493583.0, 1719493644.0, 1719493705.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,258 | INFO     | sum of square deviations: 10449251287.393108
[2024-06-27 14:28:15] 2024-06-27 18:27:58,261 | INFO     | sum of deviations: 38939106474.080475
[2024-06-27 14:28:15] 2024-06-27 18:27:58,261 | INFO     | mean x: 1719502977.2198143
[2024-06-27 14:28:15] 2024-06-27 18:27:58,262 | INFO     | mean y: 2470677.6749226004
[2024-06-27 14:28:15] 2024-06-27 18:27:58,262 | INFO     | -- intersect: -6405252485.537947
[2024-06-27 14:28:15] 2024-06-27 18:27:58,262 | INFO     | intersect: -6405252485.537947
[2024-06-27 14:28:15] 2024-06-27 18:27:58,262 | INFO     | chi2: 1.874144592513526
[2024-06-27 14:28:15] 2024-06-27 18:27:58,262 | INFO     | current chi2=1.874144592513526 (change=48.21249971077678 %)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,263 | INFO     | model: linear, x: [1719493461.0, 1719493522.0, 1719493583.0, 1719493644.0, 1719493705.0, 1719493766.0, 1719493827.0, 1719493888.0, 1719493949.0, 1719494010.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,263 | INFO     | sum of square deviations: 9971443929.647766
[2024-06-27 14:28:15] 2024-06-27 18:27:58,266 | INFO     | sum of deviations: -11739536980.861631
[2024-06-27 14:28:15] 2024-06-27 18:27:58,266 | INFO     | mean x: 1719503129.7232704
[2024-06-27 14:28:15] 2024-06-27 18:27:58,267 | INFO     | mean y: 2486806.751572327
[2024-06-27 14:28:15] 2024-06-27 18:27:58,267 | INFO     | -- intersect: 2026884749.76911
[2024-06-27 14:28:15] 2024-06-27 18:27:58,267 | INFO     | intersect: 2026884749.76911
[2024-06-27 14:28:15] 2024-06-27 18:27:58,267 | INFO     | chi2: 0.9036545735371352
[2024-06-27 14:28:15] 2024-06-27 18:27:58,267 | INFO     | current chi2=0.9036545735371352 (change=51.78309202252156 %)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,268 | INFO     | model: linear, x: [1719493766.0, 1719493827.0, 1719493888.0, 1719493949.0, 1719494010.0, 1719494071.0, 1719494132.0, 1719494193.0, 1719494254.0, 1719494315.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,268 | INFO     | sum of square deviations: 9508427546.894646
[2024-06-27 14:28:15] 2024-06-27 18:27:58,271 | INFO     | sum of deviations: -27168165457.498413
[2024-06-27 14:28:15] 2024-06-27 18:27:58,271 | INFO     | mean x: 1719503282.2268372
[2024-06-27 14:28:15] 2024-06-27 18:27:58,271 | INFO     | mean y: 2491873.3450479233
[2024-06-27 14:28:15] 2024-06-27 18:27:58,272 | INFO     | -- intersect: 4915580756.428265
[2024-06-27 14:28:15] 2024-06-27 18:27:58,272 | INFO     | intersect: 4915580756.428265
[2024-06-27 14:28:15] 2024-06-27 18:27:58,272 | INFO     | chi2: 0.8060742634240047
[2024-06-27 14:28:15] 2024-06-27 18:27:58,272 | INFO     | current chi2=0.8060742634240047 (change=10.798408260268767 %)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,273 | INFO     | left removable region: 40
[2024-06-27 14:28:15] 2024-06-27 18:27:58,273 | INFO     | model: linear, x: [1719494986.0, 1719495047.0, 1719495108.0, 1719495169.0, 1719495230.0, 1719495291.0, 1719495353.0, 1719495413.0, 1719495474.0, 1719495536.0, 1719
[2024-06-27 14:28:15] 2024-06-27 18:27:58,273 | INFO     | sum of square deviations: 7330281023.888527
[2024-06-27 14:28:15] 2024-06-27 18:27:58,276 | INFO     | sum of deviations: -10479400279.12543
[2024-06-27 14:28:15] 2024-06-27 18:27:58,276 | INFO     | mean x: 1719503709.2369337
[2024-06-27 14:28:15] 2024-06-27 18:27:58,276 | INFO     | mean y: 2500558.7665505228
[2024-06-27 14:28:15] 2024-06-27 18:27:58,276 | INFO     | -- intersect: 2460710222.463171
[2024-06-27 14:28:15] 2024-06-27 18:27:58,276 | INFO     | intersect: 2460710222.463171
[2024-06-27 14:28:15] 2024-06-27 18:27:58,277 | INFO     | chi2: 0.007064374203776727
[2024-06-27 14:28:15] 2024-06-27 18:27:58,277 | INFO     | -- intersect: 2460710222.463171
[2024-06-27 14:28:15] 2024-06-27 18:27:58,277 | INFO     | current memory leak: -1.43 B/s (using 287 data points, chi2=0.01)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | ..............................
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . Timing measurements:
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . get job = 0 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . initial setup = 2 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . payload setup = 12 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . stage-in = 0 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . payload execution = 20305 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,278 | INFO     | . stage-out = 3 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,279 | INFO     | . log creation = 0 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,279 | INFO     | ..............................
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | 
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | job summary report
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | --------------------------------------------------
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | PanDA job id: 6246088918
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | task id: 40102675
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | errors: (none)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | pilot state: finished 
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | transexitcode: 0
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | exeerrorcode: 0
[2024-06-27 14:28:15] 2024-06-27 18:27:58,811 | INFO     | exeerrordiag: 
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | exitcode: 0
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | exitmsg: OK
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | cpuconsumptiontime: 49509 s
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | nevents: 400
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | neventsw: 0
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | pid: 223858
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | pgrp: 223858
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | corecount: 8
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | event service: False
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | sizes: {0: 2387007, 9: 2387213, 11: 2387241, 20322: 2420649, 20325: 2429609, 20326: 2429665, 20358: 2429963}
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | --------------------------------------------------
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | 
[2024-06-27 14:28:15] 2024-06-27 18:27:58,812 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-27 14:28:15] 2024-06-27 18:27:58,844 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,844 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | job 6246088918 has completed (purged errors)
[2024-06-27 14:28:15] 2024-06-27 18:27:58,846 | INFO     | overall cleanup function is called
[2024-06-27 14:28:15] 2024-06-27 18:27:59,855 | INFO     | --- collectZombieJob: --- 10, [223858]
[2024-06-27 14:28:15] 2024-06-27 18:27:59,855 | INFO     | zombie collector waiting for pid 223858
[2024-06-27 14:28:15] 2024-06-27 18:27:59,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 14:28:15] 2024-06-27 18:28:00,861 | INFO     | collected zombie processes
[2024-06-27 14:28:15] 2024-06-27 18:28:00,861 | INFO     | will now attempt to kill all subprocesses of pid=223858
[2024-06-27 14:28:15] 2024-06-27 18:28:01,378 | INFO     | process IDs to be killed: [223858] (in reverse order)
[2024-06-27 14:28:15] 2024-06-27 18:28:01,536 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 14:28:15] 2024-06-27 18:28:01,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 14:28:15] 2024-06-27 18:28:01,545 | INFO     | did not find any defunct processes belonging to 223858
[2024-06-27 14:28:15] 2024-06-27 18:28:01,557 | INFO     | did not find any defunct processes belonging to 223858
[2024-06-27 14:28:15] 2024-06-27 18:28:01,557 | INFO     | ready for new job
[2024-06-27 14:28:15] 2024-06-27 18:28:01,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 14:28:15] 2024-06-27 18:28:01,559 | INFO     | *************************************
[2024-06-27 14:28:15] 2024-06-27 18:28:01,559 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 14:28:15] 2024-06-27 18:28:01,559 | INFO     | *************************************
[2024-06-27 14:28:15] 2024-06-27 18:28:01,559 | INFO     | 
[2024-06-27 14:28:15] 2024-06-27 18:28:01,563 | INFO     | architecture information:
[2024-06-27 14:28:15] 2024-06-27 18:28:01,563 | INFO     | executing command: cat /etc/os-release
[2024-06-27 14:28:15] 2024-06-27 18:28:01,590 | INFO     | cat /etc/os-release:
[2024-06-27 14:28:15] NAME="CentOS Linux"
[2024-06-27 14:28:15] VERSION="7 (Core)"
[2024-06-27 14:28:15] ID="centos"
[2024-06-27 14:28:15] ID_LIKE="rhel fedora"
[2024-06-27 14:28:15] VERSION_ID="7"
[2024-06-27 14:28:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 14:28:15] ANSI_COLOR="0;31"
[2024-06-27 14:28:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 14:28:15] HOME_URL="https://www.centos.org/"
[2024-06-27 14:28:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 14:28:15] 
[2024-06-27 14:28:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 14:28:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 14:28:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 14:28:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 14:28:15] 
[2024-06-27 14:28:15] 2024-06-27 18:28:01,591 | INFO     | *************************************
[2024-06-27 14:28:15] 2024-06-27 18:28:02,094 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-27 14:28:15] 2024-06-27 18:28:02,246 | INFO     | sufficient remaining disk space (103202947072 B)
[2024-06-27 14:28:15] 2024-06-27 18:28:02,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 14:28:15] 2024-06-27 18:28:02,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 14:28:15] 2024-06-27 18:28:02,246 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 14:28:15] 2024-06-27 18:28:02,247 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 14:28:15] 2024-06-27 18:28:02,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 14:28:15] 2024-06-27 18:28:02,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 14:28:15] 2024-06-27 18:28:02,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 14:28:15] 2024-06-27 18:28:02,668 | INFO     | all job control threads have been joined
[2024-06-27 14:28:15] 2024-06-27 18:28:02,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 14:28:15] 2024-06-27 18:28:02,847 | INFO     | aborting loop
[2024-06-27 14:28:15] 2024-06-27 18:28:03,101 | INFO     | all payload control threads have been joined
[2024-06-27 14:28:15] 2024-06-27 18:28:03,175 | INFO     | all data control threads have been joined
[2024-06-27 14:28:15] 2024-06-27 18:28:03,251 | INFO     | [job] retrieve thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:03,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 14:28:15] 2024-06-27 18:28:03,674 | INFO     | [job] control thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:03,853 | INFO     | [job] job monitor thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:03,886 | INFO     | [payload] validate_post thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,107 | INFO     | [payload] control thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,123 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 14:28:15] 2024-06-27 18:28:04,132 | INFO     | [job] validate thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,181 | INFO     | [data] control thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,190 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,272 | INFO     | [data] copytool_out thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,415 | INFO     | [job] queue monitor thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,463 | INFO     | [data] copytool_in thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,508 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,512 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:04,572 | INFO     | [payload] failed_post thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:08,138 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 14:28:15] 2024-06-27 18:28:08,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459660486464)>', '<ExcThread(monitor, started 140459229824768)>']
[2024-06-27 14:28:15] 2024-06-27 18:28:09,289 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 14:28:15] 2024-06-27 18:28:09,290 | INFO     | [monitor] control thread has ended
[2024-06-27 14:28:15] 2024-06-27 18:28:13,755 | INFO     | all workflow threads have been joined
[2024-06-27 14:28:15] 2024-06-27 18:28:13,755 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 14:28:15] 2024-06-27 18:28:13,755 | INFO     | traces error code: 0
[2024-06-27 14:28:15] 2024-06-27 18:28:13,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 14:28:15] 2024-06-27 18:28:14,247 [wrapper] ==== pilot stdout END ====
[2024-06-27 14:28:15] 2024-06-27 18:28:14,283 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 14:28:15] 2024-06-27 18:28:14,290 [wrapper] pilotpid: 182149
[2024-06-27 14:28:15] 2024-06-27 18:28:14,296 [wrapper] Pilot exit status: 0
[2024-06-27 14:28:15] 2024-06-27 18:28:14,424 [wrapper] pandaids: 6246088918
[2024-06-27 14:28:15] 2024-06-27 18:28:14,812 [wrapper] cleanup supervisor_pilot  32668 182152
[2024-06-27 14:28:15] 2024-06-27 18:28:14,859 [wrapper] Test setup, not cleaning
[2024-06-27 14:28:15] 2024-06-27 18:28:14,900 [wrapper] ==== wrapper stdout END ====
[2024-06-27 14:28:15] 2024-06-27 18:28:14,940 [wrapper] ==== wrapper stderr END ====
[2024-06-27 14:28:15] 2024-06-27 18:28:14,990 [wrapper] apfmon messages muted
[2024-06-27 14:28:15]  *** Error codes and diagnostics ***
[2024-06-27 14:28:15]     "exeErrorCode": 0,
[2024-06-27 14:28:15]     "exeErrorDiag": "",
[2024-06-27 14:28:15]     "pilotErrorCode": 0,
[2024-06-27 14:28:15]     "pilotErrorDiag": "",
[2024-06-27 14:28:15]  *** Listing of results directory ***
[2024-06-27 14:28:15] total 579988
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 14:28:15] -rwx------ 1 boincer umatlas     32220 Jun 27 08:39 runpilot2-wrapper.sh
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 14:28:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:47 run_atlas
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:47 job.xml
[2024-06-27 14:28:15] -rw-r--r-- 2 boincer umatlas 400214091 Jun 27 08:47 EVNT.34667534._000001.pool.root.1
[2024-06-27 14:28:15] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 14:28:15] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:47 shared
[2024-06-27 14:28:15] -rw-r--r-- 2 boincer umatlas    482503 Jun 27 08:47 input.tar.gz
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:47 boinc_lockfile
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas      2596 Jun 27 08:48 pandaJob.out
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas       424 Jun 27 08:48 setup.sh.local
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas   1034827 Jun 27 08:48 agis_schedconf.cvmfs.json
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas   1321363 Jun 27 08:48 cric_ddmendpoints.json
[2024-06-27 14:28:15] drwx------ 4 boincer umatlas      4096 Jun 27 08:48 pilot3
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas      6301 Jun 27 14:22 init_data.xml
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas 185203746 Jun 27 14:26 HITS.40102675._000023.pool.root.1
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas       530 Jun 27 14:26 boinc_task_state.xml
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas        95 Jun 27 14:27 pilot_heartbeat.json
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas      1064 Jun 27 14:27 memory_monitor_summary.json
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas         0 Jun 27 14:27 agis_ddmendpoints.agis.ALL.json
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas    473087 Jun 27 14:27 log.40102675._000023.job.log.tgz.1
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas      7767 Jun 27 14:27 heartbeat.json
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas        28 Jun 27 14:28 wrapper_checkpoint.txt
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 14:28 boinc_mmap_file
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas      4335 Jun 27 14:28 pilotlog.txt
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas   2000787 Jun 27 14:28 log.40102675._000023.job.log.1
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas       357 Jun 27 14:28 output.list
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas       620 Jun 27 14:28 runtime_log
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas   2488320 Jun 27 14:28 result.tar.gz
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas     11010 Jun 27 14:28 runtime_log.err
[2024-06-27 14:28:15] -rw------- 1 boincer umatlas       650 Jun 27 14:28 JPqKDmfa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmYpoKDmhj8upm.diag
[2024-06-27 14:28:15] -rw-r--r-- 1 boincer umatlas     21620 Jun 27 14:28 stderr.txt
[2024-06-27 14:28:16] HITS file was successfully produced:
[2024-06-27 14:28:16] -rw------- 1 boincer umatlas 185203746 Jun 27 14:26 shared/HITS.pool.root.1
[2024-06-27 14:28:16]  *** Contents of shared directory: ***
[2024-06-27 14:28:16] total 574632
[2024-06-27 14:28:16] -rw-r--r-- 2 boincer umatlas 400214091 Jun 27 08:47 ATLAS.root_0
[2024-06-27 14:28:16] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:47 start_atlas.sh
[2024-06-27 14:28:16] -rw-r--r-- 2 boincer umatlas    482503 Jun 27 08:47 input.tar.gz
[2024-06-27 14:28:16] -rw------- 1 boincer umatlas 185203746 Jun 27 14:26 HITS.pool.root.1
[2024-06-27 14:28:16] -rw------- 1 boincer umatlas   2488320 Jun 27 14:28 result.tar.gz
14:28:17 (156555): run_atlas exited; CPU time 49166.381002
14:28:17 (156555): called boinc_finish(0)

</stderr_txt>
]]>

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