Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:47 (147377): wrapper (7.7.26015): starting
09:11:47 (147377): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 09:11:47] Arguments: --nthreads 12
[2024-06-27 09:11:47] Threads: 12
[2024-06-27 09:11:47] Checking for CVMFS
[2024-06-27 09:11:47] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 09:11:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 09:11:48] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 09:11:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 09:11:48] 2.10.1.0 204325 5783 173764 134353 3 431 28150367 45568000 4710 130560 0 17943143 99.616 17157787 14490 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-06-27 09:11:48] CVMFS is ok
[2024-06-27 09:11:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 09:11:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 09:11:48] Further information can be found at the LHC@home message board.
[2024-06-27 09:11:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 09:11:48] Checking for apptainer binary...
[2024-06-27 09:11:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 09:11:48] Running /usr/bin/apptainer --version
[2024-06-27 09:11:48] apptainer version 1.3.2-1.el7
[2024-06-27 09:11:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 09:11:49] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0128.triumf.lcg
[2024-06-27 09:11:49] apptainer works
[2024-06-27 09:11:49] Set ATHENA_PROC_NUMBER=12
[2024-06-27 09:11:49] Set ATHENA_CORE_NUMBER=12
[2024-06-27 09:11:49] Starting ATLAS job with PandaID=6246088898
[2024-06-27 09:11:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 10:18:57]  *** The last 200 lines of the pilot log: ***
[2024-06-27 10:18:57]  guid=7616c54d-d9fb-4821-bcbe-bf99c1cc9edf
[2024-06-27 10:18:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-06-27 10:18:57]  is_tar=False
[2024-06-27 10:18:57]  lfn=log.40102675._000017.job.log.tgz.1
[2024-06-27 10:18:57]  mtime=0
[2024-06-27 10:18:57]  protocol_id=None
[2024-06-27 10:18:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-06-27 10:18:57]  replicas=None
[2024-06-27 10:18:57]  scope=mc23_13p6TeV
[2024-06-27 10:18:57]  status=None
[2024-06-27 10:18:57]  status_code=0
[2024-06-27 10:18:57]  storage_token=
[2024-06-27 10:18:57]  surl=/home/boinc/slots/0/PanDA_Pilot-6246088898/log.40102675._000017.job.log.tgz.1
[2024-06-27 10:18:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/2e/log.40102675._000017.job.log.tgz.1
[2024-06-27 10:18:57]  workdir=None
[2024-06-27 10:18:57] ]
[2024-06-27 10:18:57] 2024-06-27 17:18:32,806 | INFO     | transferring file log.40102675._000017.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6246088898/log.40102675._000017.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-06-27 10:18:57] 2024-06-27 17:18:32,806 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6246088898/log.40102675._000017.job.log.tgz.1 /home/boinc/slots/0/log.40102675._000017.job.log.t
[2024-06-27 10:18:57] 2024-06-27 17:18:32,835 | INFO     | adding to output.list: log.40102675._000017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0d/2e/log.40102675._000017.job.log.tg
[2024-06-27 10:18:57] 2024-06-27 17:18:32,836 | INFO     | summary of transferred files:
[2024-06-27 10:18:57] 2024-06-27 17:18:32,836 | INFO     |  -- lfn=log.40102675._000017.job.log.tgz.1, status_code=0, status=transferred
[2024-06-27 10:18:57] 2024-06-27 17:18:32,837 | INFO     | stage-out finished correctly
[2024-06-27 10:18:57] 2024-06-27 17:18:34,661 | INFO     | monitor loop #314: job 0:6246088898 is in state 'finished'
[2024-06-27 10:18:57] 2024-06-27 17:18:34,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 10:18:57] 2024-06-27 17:18:36,124 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-27 10:18:57] 2024-06-27 17:18:36,195 | INFO     | job 6246088898 has state=finished
[2024-06-27 10:18:57] 2024-06-27 17:18:36,195 | INFO     | preparing for final server update for job 6246088898 in state='finished'
[2024-06-27 10:18:57] 2024-06-27 17:18:36,196 | INFO     | this job has now completed (state=finished)
[2024-06-27 10:18:57] 2024-06-27 17:18:36,196 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-27 10:18:57] 2024-06-27 17:18:36,197 | INFO     | job 6246088898 has finished - writing final server update
[2024-06-27 10:18:57] 2024-06-27 17:18:36,197 | INFO     | total number of processed events: 400 (read)
[2024-06-27 10:18:57] 2024-06-27 17:18:36,203 | INFO     | executing command: lscpu
[2024-06-27 10:18:57] 2024-06-27 17:18:36,258 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 10:18:57] 2024-06-27 17:18:36,259 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 10:18:57] 2024-06-27 17:18:36,312 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 10:18:57] 2024-06-27 17:18:37,164 | INFO     | monitor loop #315: job 0:6246088898 is in state 'finished'
[2024-06-27 10:18:57] 2024-06-27 17:18:37,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 10:18:57] 2024-06-27 17:18:39,668 | INFO     | monitor loop #316: job 0:6246088898 is in state 'finished'
[2024-06-27 10:18:57] 2024-06-27 17:18:39,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,157 | INFO     | CPU arch script returned: x86-64-v4
[2024-06-27 10:18:57] 2024-06-27 17:18:41,158 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6246088898/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,159 | INFO     | extracted standard info from prmon json
[2024-06-27 10:18:57] 2024-06-27 17:18:41,159 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 10:18:57] 2024-06-27 17:18:41,160 | WARNING  | GPU info not found in prmon json
[2024-06-27 10:18:57] 2024-06-27 17:18:41,160 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 10:18:57] 2024-06-27 17:18:41,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 10:18:57] 2024-06-27 17:18:41,163 | INFO     | fitting pss+swap vs Time
[2024-06-27 10:18:57] 2024-06-27 17:18:41,164 | INFO     | model: linear, x: [1719505053.0, 1719505114.0, 1719505175.0, 1719505236.0, 1719505297.0, 1719505358.0, 1719505419.0, 1719505480.0, 1719505541.0, 1719505602.0, 1719
[2024-06-27 10:18:57] 2024-06-27 17:18:41,164 | INFO     | sum of square deviations: 60482994.5
[2024-06-27 10:18:57] 2024-06-27 17:18:41,164 | INFO     | sum of deviations: 22027513244.5
[2024-06-27 10:18:57] 2024-06-27 17:18:41,164 | INFO     | mean x: 1719506791.5
[2024-06-27 10:18:57] 2024-06-27 17:18:41,165 | INFO     | mean y: 2710339.4310344825
[2024-06-27 10:18:57] 2024-06-27 17:18:41,165 | INFO     | -- intersect: -626230480277.048
[2024-06-27 10:18:57] 2024-06-27 17:18:41,165 | INFO     | intersect: -626230480277.048
[2024-06-27 10:18:57] 2024-06-27 17:18:41,165 | INFO     | chi2: 1.929453331704503
[2024-06-27 10:18:57] 2024-06-27 17:18:41,165 | INFO     | -- intersect: -626230480277.048
[2024-06-27 10:18:57] 2024-06-27 17:18:41,166 | INFO     | current memory leak: 364.19 B/s (using 58 data points, chi2=1.93)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,166 | INFO     | ..............................
[2024-06-27 10:18:57] 2024-06-27 17:18:41,166 | INFO     | . Timing measurements:
[2024-06-27 10:18:57] 2024-06-27 17:18:41,166 | INFO     | . get job = 0 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,166 | INFO     | . initial setup = 2 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | . payload setup = 6 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | . stage-in = 0 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | . payload execution = 3965 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | . stage-out = 0 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | . log creation = 0 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,167 | INFO     | ..............................
[2024-06-27 10:18:57] 2024-06-27 17:18:41,412 | INFO     | 
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | job summary report
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | --------------------------------------------------
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | PanDA job id: 6246088898
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | task id: 40102675
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | errors: (none)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,413 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | pilot state: finished 
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | transexitcode: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | exeerrorcode: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | exeerrordiag: 
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | exitcode: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | exitmsg: OK
[2024-06-27 10:18:57] 2024-06-27 17:18:41,414 | INFO     | cpuconsumptiontime: 34804 s
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | nevents: 400
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | neventsw: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | pid: 157669
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | pgrp: 157669
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | corecount: 12
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | event service: False
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | sizes: {0: 2386833, 1: 2387032, 5: 2387238, 11: 2387294, 3975: 2413089, 3976: 2422043, 3979: 2422227, 3984: 2422397}
[2024-06-27 10:18:57] 2024-06-27 17:18:41,415 | INFO     | --------------------------------------------------
[2024-06-27 10:18:57] 2024-06-27 17:18:41,416 | INFO     | 
[2024-06-27 10:18:57] 2024-06-27 17:18:41,416 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-06-27 10:18:57] 2024-06-27 17:18:41,447 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,448 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,448 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,448 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,449 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,450 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,451 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,451 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 10:18:57] 2024-06-27 17:18:41,451 | INFO     | job 6246088898 has completed (purged errors)
[2024-06-27 10:18:57] 2024-06-27 17:18:41,451 | INFO     | overall cleanup function is called
[2024-06-27 10:18:57] 2024-06-27 17:18:42,456 | INFO     | --- collectZombieJob: --- 10, [157669]
[2024-06-27 10:18:57] 2024-06-27 17:18:42,456 | INFO     | zombie collector waiting for pid 157669
[2024-06-27 10:18:57] 2024-06-27 17:18:42,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 10:18:57] 2024-06-27 17:18:43,461 | INFO     | collected zombie processes
[2024-06-27 10:18:57] 2024-06-27 17:18:43,461 | INFO     | will now attempt to kill all subprocesses of pid=157669
[2024-06-27 10:18:57] 2024-06-27 17:18:43,562 | INFO     | process IDs to be killed: [157669] (in reverse order)
[2024-06-27 10:18:57] 2024-06-27 17:18:43,639 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 10:18:57] 2024-06-27 17:18:43,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 10:18:57] 2024-06-27 17:18:43,647 | INFO     | did not find any defunct processes belonging to 157669
[2024-06-27 10:18:57] 2024-06-27 17:18:43,652 | INFO     | did not find any defunct processes belonging to 157669
[2024-06-27 10:18:57] 2024-06-27 17:18:43,652 | INFO     | ready for new job
[2024-06-27 10:18:57] 2024-06-27 17:18:43,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 10:18:57] 2024-06-27 17:18:43,653 | INFO     | *************************************
[2024-06-27 10:18:57] 2024-06-27 17:18:43,654 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 10:18:57] 2024-06-27 17:18:43,654 | INFO     | *************************************
[2024-06-27 10:18:57] 2024-06-27 17:18:43,654 | INFO     | 
[2024-06-27 10:18:57] 2024-06-27 17:18:43,656 | INFO     | architecture information:
[2024-06-27 10:18:57] 2024-06-27 17:18:43,657 | INFO     | executing command: cat /etc/os-release
[2024-06-27 10:18:57] 2024-06-27 17:18:43,674 | INFO     | cat /etc/os-release:
[2024-06-27 10:18:57] NAME="CentOS Linux"
[2024-06-27 10:18:57] VERSION="7 (Core)"
[2024-06-27 10:18:57] ID="centos"
[2024-06-27 10:18:57] ID_LIKE="rhel fedora"
[2024-06-27 10:18:57] VERSION_ID="7"
[2024-06-27 10:18:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 10:18:57] ANSI_COLOR="0;31"
[2024-06-27 10:18:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 10:18:57] HOME_URL="https://www.centos.org/"
[2024-06-27 10:18:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 10:18:57] 
[2024-06-27 10:18:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 10:18:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 10:18:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 10:18:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 10:18:57] 
[2024-06-27 10:18:57] 2024-06-27 17:18:43,675 | INFO     | *************************************
[2024-06-27 10:18:57] 2024-06-27 17:18:44,178 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-06-27 10:18:57] 2024-06-27 17:18:44,204 | INFO     | sufficient remaining disk space (2132621131776 B)
[2024-06-27 10:18:57] 2024-06-27 17:18:44,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 10:18:57] 2024-06-27 17:18:44,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 10:18:57] 2024-06-27 17:18:44,205 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 10:18:57] 2024-06-27 17:18:44,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 10:18:57] 2024-06-27 17:18:44,206 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 10:18:57] 2024-06-27 17:18:44,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 10:18:57] 2024-06-27 17:18:44,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 10:18:57] 2024-06-27 17:18:44,316 | INFO     | all job control threads have been joined
[2024-06-27 10:18:57] 2024-06-27 17:18:44,674 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-27 10:18:57] 2024-06-27 17:18:44,674 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-27 10:18:57] 2024-06-27 17:18:44,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:18:57] 2024-06-27 17:18:44,674 | INFO     | will abort loop
[2024-06-27 10:18:57] 2024-06-27 17:18:45,199 | INFO     | all data control threads have been joined
[2024-06-27 10:18:57] 2024-06-27 17:18:45,209 | INFO     | [job] retrieve thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,276 | INFO     | [payload] failed_post thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,319 | INFO     | [job] control thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,448 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,680 | INFO     | [job] job monitor thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,684 | INFO     | all payload control threads have been joined
[2024-06-27 10:18:57] 2024-06-27 17:18:45,824 | INFO     | [payload] validate_post thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:45,914 | INFO     | [data] copytool_in thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,204 | INFO     | [data] control thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,213 | INFO     | [data] copytool_out thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 10:18:57] 2024-06-27 17:18:46,306 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,430 | INFO     | [job] validate thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,461 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,671 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,685 | INFO     | [payload] control thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:46,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 10:18:57] 2024-06-27 17:18:47,258 | INFO     | [job] queue monitor thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:50,708 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 10:18:57] 2024-06-27 17:18:51,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262230116160)>', '<ExcThread(monitor, started 140261803939584)>']
[2024-06-27 10:18:57] 2024-06-27 17:18:51,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 10:18:57] 2024-06-27 17:18:51,234 | INFO     | [monitor] control thread has ended
[2024-06-27 10:18:57] 2024-06-27 17:18:56,193 | INFO     | all workflow threads have been joined
[2024-06-27 10:18:57] 2024-06-27 17:18:56,194 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 10:18:57] 2024-06-27 17:18:56,194 | INFO     | traces error code: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:56,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 10:18:57] 2024-06-27 17:18:56,302 [wrapper] ==== pilot stdout END ====
[2024-06-27 10:18:57] 2024-06-27 17:18:56,306 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 10:18:57] 2024-06-27 17:18:56,310 [wrapper] pilotpid: 151052
[2024-06-27 10:18:57] 2024-06-27 17:18:56,313 [wrapper] Pilot exit status: 0
[2024-06-27 10:18:57] 2024-06-27 17:18:56,325 [wrapper] pandaids: 6246088898
[2024-06-27 10:18:57] 2024-06-27 17:18:56,373 [wrapper] cleanup supervisor_pilot 217487 151053
[2024-06-27 10:18:57] 2024-06-27 17:18:56,377 [wrapper] Test setup, not cleaning
[2024-06-27 10:18:57] 2024-06-27 17:18:56,380 [wrapper] ==== wrapper stdout END ====
[2024-06-27 10:18:57] 2024-06-27 17:18:56,384 [wrapper] ==== wrapper stderr END ====
[2024-06-27 10:18:57] 2024-06-27 17:18:56,390 [wrapper] apfmon messages muted
[2024-06-27 10:18:57]  *** Error codes and diagnostics ***
[2024-06-27 10:18:57]     "exeErrorCode": 0,
[2024-06-27 10:18:57]     "exeErrorDiag": "",
[2024-06-27 10:18:57]     "pilotErrorCode": 0,
[2024-06-27 10:18:57]     "pilotErrorDiag": "",
[2024-06-27 10:18:57]  *** Listing of results directory ***
[2024-06-27 10:18:57] total 567232
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc    469766 Jun 27 05:31 pilot3.tar.gz
[2024-06-27 10:18:57] -rwx------ 1 boinc boinc     32220 Jun 27 05:39 runpilot2-wrapper.sh
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc      5654 Jun 27 05:39 queuedata.json
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc       100 Jun 27 09:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 10:18:57] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 09:11 run_atlas
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc       105 Jun 27 09:11 job.xml
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc      6608 Jun 27 09:11 init_data.xml
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc 400214091 Jun 27 09:11 EVNT.34667534._000001.pool.root.1
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:11 start_atlas.sh
[2024-06-27 10:18:57] drwxrwx--x 2 boinc boinc      4096 Jun 27 09:11 shared
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc    482500 Jun 27 09:11 input.tar.gz
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc         0 Jun 27 09:11 boinc_lockfile
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc      2596 Jun 27 09:11 pandaJob.out
[2024-06-27 10:18:57] -rw------- 1 boinc boinc       424 Jun 27 09:11 setup.sh.local
[2024-06-27 10:18:57] -rw------- 1 boinc boinc   1034827 Jun 27 09:11 agis_schedconf.cvmfs.json
[2024-06-27 10:18:57] -rw------- 1 boinc boinc         0 Jun 27 09:11 agis_ddmendpoints.agis.ALL.json
[2024-06-27 10:18:57] -rw------- 1 boinc boinc   1321363 Jun 27 09:11 cric_ddmendpoints.json
[2024-06-27 10:18:57] drwx------ 4 boinc boinc      4096 Jun 27 09:12 pilot3
[2024-06-27 10:18:57] -rw------- 1 boinc boinc 175594903 Jun 27 10:17 HITS.40102675._000017.pool.root.1
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc       529 Jun 27 10:18 boinc_task_state.xml
[2024-06-27 10:18:57] -rw------- 1 boinc boinc        95 Jun 27 10:18 pilot_heartbeat.json
[2024-06-27 10:18:57] -rw------- 1 boinc boinc      1042 Jun 27 10:18 memory_monitor_summary.json
[2024-06-27 10:18:57] -rw------- 1 boinc boinc    361312 Jun 27 10:18 log.40102675._000017.job.log.tgz.1
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc      8192 Jun 27 10:18 boinc_mmap_file
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc        27 Jun 27 10:18 wrapper_checkpoint.txt
[2024-06-27 10:18:57] -rw------- 1 boinc boinc      7744 Jun 27 10:18 heartbeat.json
[2024-06-27 10:18:57] -rw------- 1 boinc boinc      4519 Jun 27 10:18 pilotlog.txt
[2024-06-27 10:18:57] -rw------- 1 boinc boinc    383701 Jun 27 10:18 log.40102675._000017.job.log.1
[2024-06-27 10:18:57] -rw------- 1 boinc boinc       357 Jun 27 10:18 output.list
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc       620 Jun 27 10:18 runtime_log
[2024-06-27 10:18:57] -rw------- 1 boinc boinc    768000 Jun 27 10:18 result.tar.gz
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc     11130 Jun 27 10:18 runtime_log.err
[2024-06-27 10:18:57] -rw------- 1 boinc boinc       647 Jun 27 10:18 RPhKDmfa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmSpoKDmzlfWJn.diag
[2024-06-27 10:18:57] -rw-r--r-- 1 boinc boinc     21653 Jun 27 10:18 stderr.txt
[2024-06-27 10:18:57] HITS file was successfully produced:
[2024-06-27 10:18:57] -rw------- 1 boinc boinc 175594903 Jun 27 10:17 shared/HITS.pool.root.1
[2024-06-27 10:18:57]  *** Contents of shared directory: ***
[2024-06-27 10:18:57] total 563564
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc 400214091 Jun 27 09:11 ATLAS.root_0
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:11 start_atlas.sh
[2024-06-27 10:18:57] -rw-r--r-- 2 boinc boinc    482500 Jun 27 09:11 input.tar.gz
[2024-06-27 10:18:57] -rw------- 1 boinc boinc 175594903 Jun 27 10:17 HITS.pool.root.1
[2024-06-27 10:18:57] -rw------- 1 boinc boinc    768000 Jun 27 10:18 result.tar.gz
10:18:59 (147377): run_atlas exited; CPU time 34668.731152
10:18:59 (147377): called boinc_finish(0)

</stderr_txt>
]]>

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