Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:46:50 (40472): wrapper (7.7.26015): starting
08:46:50 (40472): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:46:50] Arguments: --nthreads 8
[2024-06-27 08:46:50] Threads: 8
[2024-06-27 08:46:50] Checking for CVMFS
[2024-06-27 08:46:50] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:46:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:46:50] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:46:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:46:51] 2.11.2.0 47030 2323 206028 134351 2 839 17046284 18432001 15108 130560 0 18831765 99.236 26740949 56008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:46:51] CVMFS is ok
[2024-06-27 08:46:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:46:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:46:51] Further information can be found at the LHC@home message board.
[2024-06-27 08:46:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:46:51] Checking for apptainer binary...
[2024-06-27 08:46:51] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:46:51] Running /usr/bin/apptainer --version
[2024-06-27 08:46:51] apptainer version 1.3.2-1.el7
[2024-06-27 08:46:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:46:54] c-210-40.aglt2.org
[2024-06-27 08:46:54] apptainer works
[2024-06-27 08:46:54] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:46:54] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:46:54] Starting ATLAS job with PandaID=6246088936
[2024-06-27 08:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 13:52:11]  *** The last 200 lines of the pilot log: ***
[2024-06-27 13:52:11] 2024-06-27 17:51:40,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:42,822 | INFO     | monitor loop #1219: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:42,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:45,327 | INFO     | monitor loop #1220: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:45,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:47,834 | INFO     | monitor loop #1221: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:47,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:50,342 | INFO     | monitor loop #1222: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:50,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:52,852 | INFO     | monitor loop #1223: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:52,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,360 | INFO     | monitor loop #1224: job 0:6246088936 is in state 'finished'
[2024-06-27 13:52:11] 2024-06-27 17:51:55,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,418 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 13:52:11] 2024-06-27 17:51:55,418 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6246088936/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,420 | INFO     | extracted standard info from prmon json
[2024-06-27 13:52:11] 2024-06-27 17:51:55,420 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 13:52:11] 2024-06-27 17:51:55,420 | WARNING  | GPU info not found in prmon json
[2024-06-27 13:52:11] 2024-06-27 17:51:55,420 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 13:52:11] 2024-06-27 17:51:55,420 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 13:52:11] 2024-06-27 17:51:55,424 | INFO     | fitting pss+swap vs Time
[2024-06-27 13:52:11] 2024-06-27 17:51:55,425 | INFO     | model: linear, x: [1719492611.0, 1719492672.0, 1719492733.0, 1719492794.0, 1719492855.0, 1719492916.0, 1719492977.0, 1719493038.0, 1719493099.0, 1719493160.0, 1719
[2024-06-27 13:52:11] 2024-06-27 17:51:55,425 | INFO     | sum of square deviations: 8041495862.378374
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | sum of deviations: 508165639866.2027
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | mean x: 1719501608.7702703
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | mean y: 2269573.0912162163
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | -- intersect: -108658065546.85678
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | intersect: -108658065546.85678
[2024-06-27 13:52:11] 2024-06-27 17:51:55,427 | INFO     | chi2: 15.789475472941884
[2024-06-27 13:52:11] 2024-06-27 17:51:55,428 | INFO     | model: linear, x: [1719492611.0, 1719492672.0, 1719492733.0, 1719492794.0, 1719492855.0, 1719492916.0, 1719492977.0, 1719493038.0, 1719493099.0, 1719493160.0, 1719
[2024-06-27 13:52:11] 2024-06-27 17:51:55,428 | INFO     | sum of square deviations: 7640842982.006859
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | sum of deviations: 497930886429.55695
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | mean x: 1719501456.274914
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | mean y: 2265677.2680412373
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | -- intersect: -112052501886.48105
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | intersect: -112052501886.48105
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | chi2: 15.730335521218002
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | current chi2=15.730335521218002 (change=0.3745529851528568 %)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,430 | INFO     | right removable region: 290
[2024-06-27 13:52:11] 2024-06-27 17:51:55,431 | INFO     | model: linear, x: [1719492916.0, 1719492977.0, 1719493038.0, 1719493099.0, 1719493160.0, 1719493221.0, 1719493282.0, 1719493343.0, 1719493404.0, 1719493465.0, 1719
[2024-06-27 13:52:11] 2024-06-27 17:51:55,431 | INFO     | sum of square deviations: 7640794182.006859
[2024-06-27 13:52:11] 2024-06-27 17:51:55,432 | INFO     | sum of deviations: 421846419503.9043
[2024-06-27 13:52:11] 2024-06-27 17:51:55,432 | INFO     | mean x: 1719501761.274914
[2024-06-27 13:52:11] 2024-06-27 17:51:55,432 | INFO     | mean y: 2302390.151202749
[2024-06-27 13:52:11] 2024-06-27 17:51:55,432 | INFO     | -- intersect: -94930978633.51878
[2024-06-27 13:52:11] 2024-06-27 17:51:55,432 | INFO     | intersect: -94930978633.51878
[2024-06-27 13:52:11] 2024-06-27 17:51:55,433 | INFO     | chi2: 11.85128290702636
[2024-06-27 13:52:11] 2024-06-27 17:51:55,433 | INFO     | current chi2=11.85128290702636 (change=24.941883425224155 %)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,433 | INFO     | left removable region: 10
[2024-06-27 13:52:11] 2024-06-27 17:51:55,433 | INFO     | model: linear, x: [1719493221.0, 1719493282.0, 1719493343.0, 1719493404.0, 1719493465.0, 1719493526.0, 1719493587.0, 1719493648.0, 1719493709.0, 1719493770.0, 1719
[2024-06-27 13:52:11] 2024-06-27 17:51:55,433 | INFO     | sum of square deviations: 6806625281.142878
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | sum of deviations: 347407506875.7855
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | mean x: 1719501730.7857144
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | mean y: 2324649.4964285716
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | -- intersect: -87760374880.30069
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | intersect: -87760374880.30069
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | chi2: 9.861779483099738
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | -- intersect: -87760374880.30069
[2024-06-27 13:52:11] 2024-06-27 17:51:55,435 | INFO     | current memory leak: 51.04 B/s (using 280 data points, chi2=9.86)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | ..............................
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | . Timing measurements:
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | . get job = 0 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | . initial setup = 2 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | . payload setup = 33 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,436 | INFO     | . stage-in = 0 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,437 | INFO     | . payload execution = 18100 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,437 | INFO     | . stage-out = 2 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,437 | INFO     | . log creation = 0 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,437 | INFO     | ..............................
[2024-06-27 13:52:11] 2024-06-27 17:51:55,518 | INFO     | 
[2024-06-27 13:52:11] 2024-06-27 17:51:55,518 | INFO     | job summary report
[2024-06-27 13:52:11] 2024-06-27 17:51:55,518 | INFO     | --------------------------------------------------
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | PanDA job id: 6246088936
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | task id: 40102667
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | errors: (none)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | pilot state: finished 
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | transexitcode: 0
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | exeerrorcode: 0
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | exeerrordiag: 
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | exitcode: 0
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | exitmsg: OK
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | cpuconsumptiontime: 37784 s
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | nevents: 400
[2024-06-27 13:52:11] 2024-06-27 17:51:55,519 | INFO     | neventsw: 0
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | pid: 52074
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | pgrp: 52074
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | corecount: 8
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | event service: False
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | sizes: {0: 2387028, 1: 2387028, 11: 2387056, 22: 2387084, 28: 2387318, 33: 2387346, 18139: 2419511, 18143: 2428527, 18185: 2428641}
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | --------------------------------------------------
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | 
[2024-06-27 13:52:11] 2024-06-27 17:51:55,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-27 13:52:11] 2024-06-27 17:51:55,684 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,684 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,684 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,684 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,685 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,686 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 13:52:11] 2024-06-27 17:51:55,686 | INFO     | job 6246088936 has completed (purged errors)
[2024-06-27 13:52:11] 2024-06-27 17:51:55,686 | INFO     | overall cleanup function is called
[2024-06-27 13:52:11] 2024-06-27 17:51:56,697 | INFO     | --- collectZombieJob: --- 10, [52074]
[2024-06-27 13:52:11] 2024-06-27 17:51:56,698 | INFO     | zombie collector waiting for pid 52074
[2024-06-27 13:52:11] 2024-06-27 17:51:56,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 13:52:11] 2024-06-27 17:51:57,701 | INFO     | collected zombie processes
[2024-06-27 13:52:11] 2024-06-27 17:51:57,702 | INFO     | will now attempt to kill all subprocesses of pid=52074
[2024-06-27 13:52:11] 2024-06-27 17:51:58,010 | INFO     | process IDs to be killed: [52074] (in reverse order)
[2024-06-27 13:52:11] 2024-06-27 17:51:58,411 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 13:52:11] 2024-06-27 17:51:58,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 13:52:11] 2024-06-27 17:51:58,435 | INFO     | did not find any defunct processes belonging to 52074
[2024-06-27 13:52:11] 2024-06-27 17:51:58,449 | INFO     | did not find any defunct processes belonging to 52074
[2024-06-27 13:52:11] 2024-06-27 17:51:58,449 | INFO     | ready for new job
[2024-06-27 13:52:11] 2024-06-27 17:51:58,449 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 13:52:11] 2024-06-27 17:51:58,459 | INFO     | *************************************
[2024-06-27 13:52:11] 2024-06-27 17:51:58,459 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 13:52:11] 2024-06-27 17:51:58,459 | INFO     | *************************************
[2024-06-27 13:52:11] 2024-06-27 17:51:58,459 | INFO     | 
[2024-06-27 13:52:11] 2024-06-27 17:51:58,466 | INFO     | architecture information:
[2024-06-27 13:52:11] 2024-06-27 17:51:58,469 | INFO     | executing command: cat /etc/os-release
[2024-06-27 13:52:11] 2024-06-27 17:51:58,504 | INFO     | cat /etc/os-release:
[2024-06-27 13:52:11] NAME="CentOS Linux"
[2024-06-27 13:52:11] VERSION="7 (Core)"
[2024-06-27 13:52:11] ID="centos"
[2024-06-27 13:52:11] ID_LIKE="rhel fedora"
[2024-06-27 13:52:11] VERSION_ID="7"
[2024-06-27 13:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 13:52:11] ANSI_COLOR="0;31"
[2024-06-27 13:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 13:52:11] HOME_URL="https://www.centos.org/"
[2024-06-27 13:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 13:52:11] 
[2024-06-27 13:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 13:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 13:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 13:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 13:52:11] 
[2024-06-27 13:52:11] 2024-06-27 17:51:58,504 | INFO     | *************************************
[2024-06-27 13:52:11] 2024-06-27 17:51:59,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-27 13:52:11] 2024-06-27 17:51:59,152 | INFO     | sufficient remaining disk space (73088892928 B)
[2024-06-27 13:52:11] 2024-06-27 17:51:59,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 13:52:11] 2024-06-27 17:51:59,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 13:52:11] 2024-06-27 17:51:59,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:52:11] 2024-06-27 17:51:59,154 | INFO     | aborting loop
[2024-06-27 13:52:11] 2024-06-27 17:51:59,154 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 13:52:11] 2024-06-27 17:51:59,157 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 13:52:11] 2024-06-27 17:51:59,158 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 13:52:11] 2024-06-27 17:51:59,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 13:52:11] 2024-06-27 17:51:59,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 13:52:11] 2024-06-27 17:51:59,394 | INFO     | all job control threads have been joined
[2024-06-27 13:52:11] 2024-06-27 17:51:59,497 | INFO     | all data control threads have been joined
[2024-06-27 13:52:11] 2024-06-27 17:51:59,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 13:52:11] 2024-06-27 17:52:00,158 | INFO     | [job] retrieve thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,159 | INFO     | [job] job monitor thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,246 | INFO     | all payload control threads have been joined
[2024-06-27 13:52:11] 2024-06-27 17:52:00,298 | INFO     | [job] validate thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,334 | INFO     | [data] copytool_in thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,400 | INFO     | [job] control thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,502 | INFO     | [data] control thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 13:52:11] 2024-06-27 17:52:00,777 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:00,795 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,031 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,071 | INFO     | [payload] failed_post thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,102 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,160 | INFO     | [data] copytool_out thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,257 | INFO     | [payload] control thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,549 | INFO     | [job] queue monitor thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:01,723 | INFO     | [payload] validate_post thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:03,805 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 13:52:11] 2024-06-27 17:52:04,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381222352704)>', '<ExcThread(monitor, started 140380645345024)>']
[2024-06-27 13:52:11] 2024-06-27 17:52:05,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 13:52:11] 2024-06-27 17:52:05,194 | INFO     | [monitor] control thread has ended
[2024-06-27 13:52:11] 2024-06-27 17:52:09,344 | INFO     | all workflow threads have been joined
[2024-06-27 13:52:11] 2024-06-27 17:52:09,345 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 13:52:11] 2024-06-27 17:52:09,345 | INFO     | traces error code: 0
[2024-06-27 13:52:11] 2024-06-27 17:52:09,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 13:52:11] 2024-06-27 17:52:09,560 [wrapper] ==== pilot stdout END ====
[2024-06-27 13:52:11] 2024-06-27 17:52:09,602 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 13:52:11] 2024-06-27 17:52:09,625 [wrapper] pilotpid: 445
[2024-06-27 13:52:11] 2024-06-27 17:52:09,631 [wrapper] Pilot exit status: 0
[2024-06-27 13:52:11] 2024-06-27 17:52:09,823 [wrapper] pandaids: 6246088936
[2024-06-27 13:52:11] 2024-06-27 17:52:10,282 [wrapper] cleanup supervisor_pilot 39957 446
[2024-06-27 13:52:11] 2024-06-27 17:52:10,304 [wrapper] Test setup, not cleaning
[2024-06-27 13:52:11] 2024-06-27 17:52:10,307 [wrapper] ==== wrapper stdout END ====
[2024-06-27 13:52:11] 2024-06-27 17:52:10,322 [wrapper] ==== wrapper stderr END ====
[2024-06-27 13:52:11] 2024-06-27 17:52:10,337 [wrapper] apfmon messages muted
[2024-06-27 13:52:11]  *** Error codes and diagnostics ***
[2024-06-27 13:52:11]     "exeErrorCode": 0,
[2024-06-27 13:52:11]     "exeErrorDiag": "",
[2024-06-27 13:52:11]     "pilotErrorCode": 0,
[2024-06-27 13:52:11]     "pilotErrorDiag": "",
[2024-06-27 13:52:11]  *** Listing of results directory ***
[2024-06-27 13:52:11] total 572352
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 13:52:11] -rwx------ 1 boincer umatlas     32220 Jun 27 08:39 runpilot2-wrapper.sh
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:39 queuedata.json
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 13:52:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:46 run_atlas
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:46 job.xml
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas 399364240 Jun 27 08:46 EVNT.34667490._000002.pool.root.1
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 13:52:11] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:46 shared
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas    482517 Jun 27 08:46 input.tar.gz
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:46 boinc_lockfile
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas      2616 Jun 27 08:46 pandaJob.out
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas       467 Jun 27 08:46 setup.sh.local
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas   1034827 Jun 27 08:47 agis_schedconf.cvmfs.json
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas   1321363 Jun 27 08:47 cric_ddmendpoints.json
[2024-06-27 13:52:11] drwx------ 4 boincer umatlas      4096 Jun 27 08:47 pilot3
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas      6340 Jun 27 13:49 init_data.xml
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas 179216974 Jun 27 13:50 HITS.40102667._000050.pool.root.1
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas       531 Jun 27 13:50 boinc_task_state.xml
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas      1075 Jun 27 13:51 memory_monitor_summary.json
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas         0 Jun 27 13:51 agis_ddmendpoints.agis.ALL.json
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas    439377 Jun 27 13:51 log.40102667._000050.job.log.tgz.1
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas        95 Jun 27 13:51 pilot_heartbeat.json
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas      7732 Jun 27 13:51 heartbeat.json
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas      4334 Jun 27 13:52 pilotlog.txt
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas   1539679 Jun 27 13:52 log.40102667._000050.job.log.1
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas        28 Jun 27 13:52 wrapper_checkpoint.txt
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 13:52 boinc_mmap_file
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas       357 Jun 27 13:52 output.list
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas       620 Jun 27 13:52 runtime_log
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas   1996800 Jun 27 13:52 result.tar.gz
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas     11405 Jun 27 13:52 runtime_log.err
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas       649 Jun 27 13:52 KjJKDmfa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmCpoKDm7zRojm.diag
[2024-06-27 13:52:11] -rw-r--r-- 1 boincer umatlas     21900 Jun 27 13:52 stderr.txt
[2024-06-27 13:52:11] HITS file was successfully produced:
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas 179216974 Jun 27 13:50 shared/HITS.pool.root.1
[2024-06-27 13:52:11]  *** Contents of shared directory: ***
[2024-06-27 13:52:11] total 567480
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas 399364240 Jun 27 08:46 ATLAS.root_0
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:46 start_atlas.sh
[2024-06-27 13:52:11] -rw-r--r-- 2 boincer umatlas    482517 Jun 27 08:46 input.tar.gz
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas 179216974 Jun 27 13:50 HITS.pool.root.1
[2024-06-27 13:52:11] -rw------- 1 boincer umatlas   1996800 Jun 27 13:52 result.tar.gz
13:52:13 (40472): run_atlas exited; CPU time 36497.100181
13:52:13 (40472): called boinc_finish(0)

</stderr_txt>
]]>

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