Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:09 (2100915): wrapper (7.7.26015): starting
09:12:09 (2100915): wrapper: running run_atlas (--nthreads 4)
[2024-06-28 09:12:09] Arguments: --nthreads 4
[2024-06-28 09:12:09] Threads: 4
[2024-06-28 09:12:09] Checking for CVMFS
[2024-06-28 09:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-28 09:12:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-28 09:12:10] Running cvmfs_config stat atlas.cern.ch
[2024-06-28 09:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-28 09:12:11] 2.11.3.0 1853111 155 52804 134366 1 17 20065139 31457281 921 130560 0 129889 99.984 44967 1655 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-06-28 09:12:11] CVMFS is ok
[2024-06-28 09:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-28 09:12:11] Small home clusters do not require a local http proxy but it is suggested if
[2024-06-28 09:12:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-06-28 09:12:11] Further information can be found at the LHC@home message board.
[2024-06-28 09:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-28 09:12:11] Checking for apptainer binary...
[2024-06-28 09:12:11] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-28 09:12:11] Running /usr/bin/apptainer --version
[2024-06-28 09:12:11] apptainer version 1.3.2-1.el9
[2024-06-28 09:12:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-28 09:12:11] Atto003
[2024-06-28 09:12:11] apptainer works
[2024-06-28 09:12:11] Set ATHENA_PROC_NUMBER=4
[2024-06-28 09:12:11] Set ATHENA_CORE_NUMBER=4
[2024-06-28 09:12:11] Starting ATLAS job with PandaID=6246088707
[2024-06-28 09:12:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 11:31:22]  *** The last 200 lines of the pilot log: ***
[2024-06-28 11:31:22] 2024-06-28 02:31:08,066 | INFO     | intersect: -133313493588.21107
[2024-06-28 11:31:22] 2024-06-28 02:31:08,066 | INFO     | chi2: 5.140120523050656
[2024-06-28 11:31:22] 2024-06-28 02:31:08,066 | INFO     | model: linear, x: [1719533589.0, 1719533650.0, 1719533711.0, 1719533772.0, 1719533833.0, 1719533894.0, 1719533955.0, 1719534016.0, 1719534077.0, 1719534138.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,066 | INFO     | sum of square deviations: 697054930.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,067 | INFO     | sum of deviations: 58633953655.00001
[2024-06-28 11:31:22] 2024-06-28 02:31:08,067 | INFO     | mean x: 1719537554.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,067 | INFO     | mean y: 2264537.4580152673
[2024-06-28 11:31:22] 2024-06-28 02:31:08,067 | INFO     | -- intersect: -144639543317.29468
[2024-06-28 11:31:22] 2024-06-28 02:31:08,067 | INFO     | intersect: -144639543317.29468
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | chi2: 5.123085887253985
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | current chi2=5.123085887253985 (change=0.3314053769805585 %)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | right removable region: 130
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | model: linear, x: [1719533894.0, 1719533955.0, 1719534016.0, 1719534077.0, 1719534138.0, 1719534199.0, 1719534260.0, 1719534321.0, 1719534382.0, 1719534443.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | sum of square deviations: 697054930.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,068 | INFO     | sum of deviations: 32444352246.99999
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | mean x: 1719537859.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | mean y: 2319191.4961832063
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | -- intersect: -80033399083.1715
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | intersect: -80033399083.1715
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | chi2: 2.949999566954186
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | current chi2=2.949999566954186 (change=42.60835803897912 %)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | model: linear, x: [1719534199.0, 1719534260.0, 1719534321.0, 1719534382.0, 1719534443.0, 1719534504.0, 1719534565.0, 1719534626.0, 1719534687.0, 1719534748.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,069 | INFO     | 8313s have passed since pilot start
[2024-06-28 11:31:22] 2024-06-28 02:31:08,070 | INFO     | sum of square deviations: 620244187.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,070 | INFO     | sum of deviations: 7141844437.000007
[2024-06-28 11:31:22] 2024-06-28 02:31:08,070 | INFO     | mean x: 1719538011.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,070 | INFO     | mean y: 2369393.746031746
[2024-06-28 11:31:22] 2024-06-28 02:31:08,070 | INFO     | -- intersect: -19797369530.274643
[2024-06-28 11:31:22] 2024-06-28 02:31:08,071 | INFO     | intersect: -19797369530.274643
[2024-06-28 11:31:22] 2024-06-28 02:31:08,071 | INFO     | chi2: 1.286882556591092
[2024-06-28 11:31:22] 2024-06-28 02:31:08,071 | INFO     | current chi2=1.286882556591092 (change=56.37685608476981 %)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,071 | INFO     | model: linear, x: [1719534504.0, 1719534565.0, 1719534626.0, 1719534687.0, 1719534748.0, 1719534809.0, 1719534870.0, 1719534931.0, 1719534992.0, 1719535053.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,071 | INFO     | sum of square deviations: 549294020.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | sum of deviations: -13589378089.999998
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | mean x: 1719538164.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | mean y: 2413764.752066116
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | -- intersect: 42543299701.9054
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | intersect: 42543299701.9054
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | chi2: 0.03806694805070901
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | current chi2=0.03806694805070901 (change=97.04192524362541 %)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | model: linear, x: [1719534809.0, 1719534870.0, 1719534931.0, 1719534992.0, 1719535053.0, 1719535114.0, 1719535175.0, 1719535236.0, 1719535297.0, 1719535358.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,072 | INFO     | sum of square deviations: 483971865.0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | sum of deviations: -13421015710.999998
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | mean x: 1719538316.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | mean y: 2413320.224137931
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | -- intersect: 47686901676.61441
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | intersect: 47686901676.61441
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | chi2: 0.0289908382706274
[2024-06-28 11:31:22] 2024-06-28 02:31:08,073 | INFO     | current chi2=0.0289908382706274 (change=23.842493934610456 %)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | left removable region: 40
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | model: linear, x: [1719536029.0, 1719536090.0, 1719536151.0, 1719536212.0, 1719536273.0, 1719536334.0, 1719536395.0, 1719536456.0, 1719536517.0, 1719536578.0, 1719
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | sum of square deviations: 226022842.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | sum of deviations: -7416801113.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | mean x: 1719538743.5
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | mean y: 2400348.033333333
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | -- intersect: 56428010814.80371
[2024-06-28 11:31:22] 2024-06-28 02:31:08,074 | INFO     | intersect: 56428010814.80371
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | chi2: 0.02552181118891607
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | -- intersect: 56428010814.80371
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | current memory leak: -32.81 B/s (using 90 data points, chi2=0.03)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | ..............................
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | . Timing measurements:
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | . get job = 0 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | . initial setup = 5 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | . payload setup = 7 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,075 | INFO     | . stage-in = 0 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,076 | INFO     | . payload execution = 8261 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,076 | INFO     | . stage-out = 0 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,076 | INFO     | . log creation = 0 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,076 | INFO     | ..............................
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | 
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | job summary report
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | --------------------------------------------------
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | PanDA job id: 6246088707
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | task id: 40102634
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | errors: (none)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,156 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | pilot state: finished 
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | transexitcode: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | exeerrorcode: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | exeerrordiag: 
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | exitcode: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | exitmsg: OK
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | cpuconsumptiontime: 29060 s
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | nevents: 400
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | neventsw: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | pid: 2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | pgrp: 2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | corecount: 4
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | event service: False
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | sizes: {0: 2386877, 1: 2387076, 6: 2387282, 12: 2387310, 8272: 2415113, 8274: 2424073, 8277: 2424257, 8292: 2424427}
[2024-06-28 11:31:22] 2024-06-28 02:31:08,157 | INFO     | --------------------------------------------------
[2024-06-28 11:31:22] 2024-06-28 02:31:08,158 | INFO     | 
[2024-06-28 11:31:22] 2024-06-28 02:31:08,158 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,175 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 11:31:22] 2024-06-28 02:31:08,176 | INFO     | job 6246088707 has completed (purged errors)
[2024-06-28 11:31:22] 2024-06-28 02:31:08,176 | INFO     | overall cleanup function is called
[2024-06-28 11:31:22] 2024-06-28 02:31:09,182 | INFO     | --- collectZombieJob: --- 10, [2111687]
[2024-06-28 11:31:22] 2024-06-28 02:31:09,182 | INFO     | zombie collector waiting for pid 2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:09,182 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 11:31:22] 2024-06-28 02:31:10,187 | INFO     | collected zombie processes
[2024-06-28 11:31:22] 2024-06-28 02:31:10,187 | INFO     | will now attempt to kill all subprocesses of pid=2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:10,273 | INFO     | process IDs to be killed: [2111687] (in reverse order)
[2024-06-28 11:31:22] 2024-06-28 02:31:10,326 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 11:31:22] 2024-06-28 02:31:10,326 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 11:31:22] 2024-06-28 02:31:10,330 | INFO     | did not find any defunct processes belonging to 2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:10,333 | INFO     | did not find any defunct processes belonging to 2111687
[2024-06-28 11:31:22] 2024-06-28 02:31:10,334 | INFO     | ready for new job
[2024-06-28 11:31:22] 2024-06-28 02:31:10,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 11:31:22] 2024-06-28 02:31:10,335 | INFO     | *************************************
[2024-06-28 11:31:22] 2024-06-28 02:31:10,335 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 11:31:22] 2024-06-28 02:31:10,335 | INFO     | *************************************
[2024-06-28 11:31:22] 2024-06-28 02:31:10,335 | INFO     | 
[2024-06-28 11:31:22] 2024-06-28 02:31:10,349 | INFO     | architecture information:
[2024-06-28 11:31:22] 2024-06-28 02:31:10,349 | INFO     | executing command: cat /etc/os-release
[2024-06-28 11:31:22] 2024-06-28 02:31:10,361 | INFO     | cat /etc/os-release:
[2024-06-28 11:31:22] NAME="CentOS Linux"
[2024-06-28 11:31:22] VERSION="7 (Core)"
[2024-06-28 11:31:22] ID="centos"
[2024-06-28 11:31:22] ID_LIKE="rhel fedora"
[2024-06-28 11:31:22] VERSION_ID="7"
[2024-06-28 11:31:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 11:31:22] ANSI_COLOR="0;31"
[2024-06-28 11:31:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 11:31:22] HOME_URL="https://www.centos.org/"
[2024-06-28 11:31:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 11:31:22] 
[2024-06-28 11:31:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 11:31:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 11:31:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 11:31:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 11:31:22] 
[2024-06-28 11:31:22] 2024-06-28 02:31:10,361 | INFO     | *************************************
[2024-06-28 11:31:22] 2024-06-28 02:31:10,864 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-06-28 11:31:22] 2024-06-28 02:31:10,882 | INFO     | sufficient remaining disk space (128824901632 B)
[2024-06-28 11:31:22] 2024-06-28 02:31:10,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 11:31:22] 2024-06-28 02:31:10,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 11:31:22] 2024-06-28 02:31:10,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 11:31:22] 2024-06-28 02:31:10,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 11:31:22] 2024-06-28 02:31:10,883 | INFO     | aborting loop
[2024-06-28 11:31:22] 2024-06-28 02:31:11,002 | INFO     | all data control threads have been joined
[2024-06-28 11:31:22] 2024-06-28 02:31:11,080 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 11:31:22] 2024-06-28 02:31:11,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 11:31:22] 2024-06-28 02:31:11,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 11:31:22] 2024-06-28 02:31:11,887 | INFO     | [job] retrieve thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:11,888 | INFO     | [job] job monitor thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:11,918 | INFO     | all job control threads have been joined
[2024-06-28 11:31:22] 2024-06-28 02:31:11,967 | INFO     | all payload control threads have been joined
[2024-06-28 11:31:22] 2024-06-28 02:31:12,007 | INFO     | [data] control thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,164 | INFO     | [payload] validate_post thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,210 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,317 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,365 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 11:31:22] 2024-06-28 02:31:12,599 | INFO     | [payload] failed_post thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,814 | INFO     | [data] copytool_in thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,888 | INFO     | [data] copytool_out thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,923 | INFO     | [job] control thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:12,972 | INFO     | [payload] control thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:13,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 11:31:22] 2024-06-28 02:31:13,197 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:13,306 | INFO     | [job] validate thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:14,171 | INFO     | [job] queue monitor thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:16,562 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 11:31:22] 2024-06-28 02:31:17,504 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140646434301760)>', '<ExcThread(monitor, started 140645792466688)>']
[2024-06-28 11:31:22] 2024-06-28 02:31:18,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 11:31:22] 2024-06-28 02:31:18,118 | INFO     | [monitor] control thread has ended
[2024-06-28 11:31:22] 2024-06-28 02:31:22,529 | INFO     | all workflow threads have been joined
[2024-06-28 11:31:22] 2024-06-28 02:31:22,529 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 11:31:22] 2024-06-28 02:31:22,529 | INFO     | traces error code: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:22,529 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 11:31:22] 2024-06-28 02:31:22,600 [wrapper] ==== pilot stdout END ====
[2024-06-28 11:31:22] 2024-06-28 02:31:22,602 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 11:31:22] 2024-06-28 02:31:22,604 [wrapper] pilotpid: 2104866
[2024-06-28 11:31:22] 2024-06-28 02:31:22,606 [wrapper] Pilot exit status: 0
[2024-06-28 11:31:22] 2024-06-28 02:31:22,614 [wrapper] pandaids: 6246088707
[2024-06-28 11:31:22] 2024-06-28 02:31:22,643 [wrapper] cleanup supervisor_pilot 2205538 2104867
[2024-06-28 11:31:22] 2024-06-28 02:31:22,645 [wrapper] Test setup, not cleaning
[2024-06-28 11:31:22] 2024-06-28 02:31:22,647 [wrapper] ==== wrapper stdout END ====
[2024-06-28 11:31:22] 2024-06-28 02:31:22,650 [wrapper] ==== wrapper stderr END ====
[2024-06-28 11:31:22] 2024-06-28 02:31:22,656 [wrapper] apfmon messages muted
[2024-06-28 11:31:22]  *** Error codes and diagnostics ***
[2024-06-28 11:31:22]     "exeErrorCode": 0,
[2024-06-28 11:31:22]     "exeErrorDiag": "",
[2024-06-28 11:31:22]     "pilotErrorCode": 0,
[2024-06-28 11:31:22]     "pilotErrorDiag": "",
[2024-06-28 11:31:22]  *** Listing of results directory ***
[2024-06-28 11:31:22] total 564204
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc    469766 Jun 27 21:31 pilot3.tar.gz
[2024-06-28 11:31:22] -rwx------. 1 boinc boinc     32220 Jun 27 21:39 runpilot2-wrapper.sh
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc      5654 Jun 27 21:39 queuedata.json
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc       100 Jun 28 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 11:31:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun 28 09:12 run_atlas
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc       105 Jun 28 09:12 job.xml
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc      9501 Jun 28 09:12 init_data.xml
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc 395780987 Jun 28 09:12 EVNT.34667357._000002.pool.root.1
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc     17537 Jun 28 09:12 start_atlas.sh
[2024-06-28 11:31:22] drwxrwx--x. 2 boinc boinc        68 Jun 28 09:12 shared
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc    482516 Jun 28 09:12 input.tar.gz
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc         0 Jun 28 09:12 boinc_lockfile
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc      2622 Jun 28 09:12 pandaJob.out
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc       424 Jun 28 09:12 setup.sh.local
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc   1036914 Jun 28 09:12 agis_schedconf.cvmfs.json
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc         0 Jun 28 09:12 agis_ddmendpoints.agis.ALL.json
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc   1321378 Jun 28 09:12 cric_ddmendpoints.json
[2024-06-28 11:31:22] drwx------. 4 boinc boinc      4096 Jun 28 09:12 pilot3
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc 176305349 Jun 28 11:30 HITS.40102634._000027.pool.root.1
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc      1011 Jun 28 11:30 memory_monitor_summary.json
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc    258549 Jun 28 11:30 log.40102634._000027.job.log.tgz.1
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc       529 Jun 28 11:30 boinc_task_state.xml
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc        95 Jun 28 11:31 pilot_heartbeat.json
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc      7640 Jun 28 11:31 heartbeat.json
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc      8192 Jun 28 11:31 boinc_mmap_file
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc        27 Jun 28 11:31 wrapper_checkpoint.txt
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc      4212 Jun 28 11:31 pilotlog.txt
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc    802435 Jun 28 11:31 log.40102634._000027.job.log.1
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc       357 Jun 28 11:31 output.list
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc       620 Jun 28 11:31 runtime_log
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc   1075200 Jun 28 11:31 result.tar.gz
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc     10947 Jun 28 11:31 runtime_log.err
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc       630 Jun 28 11:31 4shMDmWa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmknoKDmT2AZQn.diag
[2024-06-28 11:31:22] -rw-r--r--. 1 boinc boinc     21560 Jun 28 11:31 stderr.txt
[2024-06-28 11:31:22] HITS file was successfully produced:
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc 176305349 Jun 28 11:30 shared/HITS.pool.root.1
[2024-06-28 11:31:22]  *** Contents of shared directory: ***
[2024-06-28 11:31:22] total 560228
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc 395780987 Jun 28 09:12 ATLAS.root_0
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc     17537 Jun 28 09:12 start_atlas.sh
[2024-06-28 11:31:22] -rw-r--r--. 2 boinc boinc    482516 Jun 28 09:12 input.tar.gz
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc 176305349 Jun 28 11:30 HITS.pool.root.1
[2024-06-28 11:31:22] -rw-------. 1 boinc boinc   1075200 Jun 28 11:31 result.tar.gz
11:31:23 (2100915): run_atlas exited; CPU time 29004.466034
11:31:23 (2100915): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN