Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2024-06-27 16:06:55 (26232): Detected: vboxwrapper 26206
2024-06-27 16:06:55 (26232): Detected: BOINC client v8.0.2
2024-06-27 16:06:55 (26232): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2024-06-27 16:06:56 (26232): Successfully copied 'init_data.xml' to the shared directory.
2024-06-27 16:06:57 (26232): Create VM. (boinc_2a72164985f2d561, slot#4)
2024-06-27 16:06:59 (26232): Setting Memory Size for VM. (4800MB)
2024-06-27 16:07:00 (26232): Setting CPU Count for VM. (8)
2024-06-27 16:07:00 (26232): Setting Chipset Options for VM.
2024-06-27 16:07:01 (26232): Setting Graphics Controller Options for VM.
2024-06-27 16:07:01 (26232): Setting Boot Options for VM.
2024-06-27 16:07:01 (26232): Setting Network Configuration for NAT.
2024-06-27 16:07:01 (26232): Enabling VM Network Access.
2024-06-27 16:07:02 (26232): Disabling USB Support for VM.
2024-06-27 16:07:02 (26232): Disabling COM Port Support for VM.
2024-06-27 16:07:02 (26232): Disabling LPT Port Support for VM.
2024-06-27 16:07:02 (26232): Disabling Audio Support for VM.
2024-06-27 16:07:03 (26232): Disabling Clipboard Support for VM.
2024-06-27 16:07:03 (26232): Disabling Drag and Drop Support for VM.
2024-06-27 16:07:03 (26232): Adding storage controller(s) to VM.
2024-06-27 16:07:03 (26232): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-06-27 16:07:06 (26232): Adding VirtualBox Guest Additions to VM.
2024-06-27 16:07:06 (26232): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-06-27 16:07:07 (26232): forwarding host port 61356 to guest port 80
2024-06-27 16:07:07 (26232): Enabling remote desktop for VM.
2024-06-27 16:07:07 (26232): Enabling shared directory for VM.
2024-06-27 16:07:08 (26232): Starting VM using VBoxManage interface. (boinc_2a72164985f2d561, slot#4)
2024-06-27 16:07:13 (26232): Successfully started VM. (PID = '24716')
2024-06-27 16:07:13 (26232): Reporting VM Process ID to BOINC.
2024-06-27 16:07:13 (26232): Guest Log: BIOS: VirtualBox 7.0.14
2024-06-27 16:07:13 (26232): Guest Log: CPUID EDX: 0x178bfbff
2024-06-27 16:07:13 (26232): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-06-27 16:07:13 (26232): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-06-27 16:07:13 (26232): VM state change detected. (old = 'poweredoff', new = 'running')
2024-06-27 16:07:13 (26232): Detected: Web Application Enabled (http://localhost:61356)
2024-06-27 16:07:13 (26232): Detected: Remote Desktop Enabled (localhost:61357)
2024-06-27 16:07:14 (26232): VM state change detected. (old = 'running', new = 'paused')
2024-06-27 16:07:19 (26232): Preference change detected
2024-06-27 16:07:19 (26232): Setting CPU throttle for VM. (70%)
2024-06-27 16:07:20 (26232): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-06-27 16:07:20 (26232): VM state change detected. (old = 'paused', new = 'running')
2024-06-27 16:07:21 (26232): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-06-27 16:07:21 (26232): Guest Log: BIOS: Booting from Hard Disk...
2024-06-27 16:07:24 (26232): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-06-27 16:07:24 (26232): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-06-27 16:07:24 (26232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-06-27 16:07:38 (26232): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-06-27 16:07:38 (26232): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-06-27 16:08:01 (26232): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000060 main     Log opened 2024-06-27T16:07:53.502055000Z
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000108 main     OS Product: Linux
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000120 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000129 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000139 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000139 main     Process ID: 1362
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000139 main     Package type: LINUX_64BITS_GENERIC
2024-06-27 16:08:01 (26232): Guest Log: 00:00:00.000473 main     5.2.32 r132073 started. Verbose level = 0
2024-06-27 16:08:01 (26232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-06-27 16:08:01 (26232): Guest Log: [INFO] Mounting shared directory
2024-06-27 16:08:02 (26232): Guest Log: [INFO] Checking for init_data.xml
2024-06-27 16:08:10 (26232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-06-27 16:08:10 (26232): Guest Log: [INFO] Detected branch: prod
2024-06-27 16:08:11 (26232): Guest Log: This is the prod version of the ATLAS job wrapper
2024-06-27 16:08:11 (26232): Guest Log: Copying input files
2024-06-27 16:08:11 (26232): Guest Log: 00:00:10.017814 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 783 105 882 000ns (GuestNow=1 719 493 690 403 949 000 ns GuestLast=1 719 504 473 509 831 000 ns fSetTimeLastLoop=true )
2024-06-27 16:08:15 (26232): Guest Log: Copied input files into RunAtlas.
2024-06-27 16:08:15 (26232): Guest Log: Detected user-configured HTTP proxy at http://proxy:3128 - will set in /etc/cvmfs/default.local
2024-06-27 16:09:49 (26232): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-06-27 16:09:50 (26232): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-06-27 16:09:50 (26232): Guest Log: 2.6.3.0 1655 1 29572 134351 3 1 3117206 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2024-06-27 16:09:53 (26232): Guest Log: copied the webapp to /var/www
2024-06-27 16:09:53 (26232): Guest Log: ATHENA_PROC_NUMBER=8
2024-06-27 16:09:54 (26232): Guest Log: ATHENA_CORE_NUMBER=8
2024-06-27 16:09:54 (26232): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-06-27 16:09:55 (26232): Guest Log:  *** Starting ATLAS job. (PandaID=6246088722 taskID=40102634) ***
2024-06-27 16:10:03 (26232): VM state change detected. (old = 'running', new = 'paused')
2024-06-27 16:10:22 (26232): VM state change detected. (old = 'paused', new = 'running')
2024-06-27 16:10:32 (26232): VM state change detected. (old = 'running', new = 'paused')
2024-06-27 16:10:52 (26232): VM state change detected. (old = 'paused', new = 'running')
2024-06-27 16:17:24 (26232): VM state change detected. (old = 'running', new = 'paused')
2024-06-27 16:17:44 (26232): VM state change detected. (old = 'paused', new = 'running')
2024-06-27 16:53:47 (26232): VM state change detected. (old = 'running', new = 'paused')
2024-06-27 16:54:07 (26232): VM state change detected. (old = 'paused', new = 'running')
2024-06-27 16:56:27 (26232): Guest Log:  *** Job finished ***
2024-06-27 16:56:27 (26232): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:54:58,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:54:58,887 | INFO     | [job] queue monitor thread has finished
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:02,832 | INFO     | [data] queue_monitor thread has finished
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:04,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023534827328)>', '<ExcThread(monitor, started 140023089317632)>']
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:05,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:05,109 | INFO     | [monitor] control thread has ended
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,902 | INFO     | all workflow threads have been joined
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,903 | INFO     | end of generic workflow (traces error code: 0)
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,903 | INFO     | traces error code: 0
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,949 [wrapper] ==== pilot stdout END ====
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,956 [wrapper] ==== wrapper stdout RESUME ====
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,965 [wrapper] pilotpid: 6089
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:09,968 [wrapper] Pilot exit status: 0
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,087 [wrapper] pandaids: 6246088722
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,114 [wrapper] cleanup supervisor_pilot 19639 6090
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,116 [wrapper] Test setup, not cleaning
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,119 [wrapper] ==== wrapper stdout END ====
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,121 [wrapper] ==== wrapper stderr END ====
2024-06-27 16:56:27 (26232): Guest Log: 2024-06-27 13:55:10,128 [wrapper] apfmon messages muted
2024-06-27 16:56:27 (26232): Guest Log:  *** Error codes and diagnostics ***
2024-06-27 16:56:27 (26232): Guest Log:     "exeErrorCode": 0,
2024-06-27 16:56:27 (26232): Guest Log:     "exeErrorDiag": "",
2024-06-27 16:56:27 (26232): Guest Log:     "pilotErrorCode": 0,
2024-06-27 16:56:27 (26232): Guest Log:     "pilotErrorDiag": "",
2024-06-27 16:56:27 (26232): Guest Log:  *** Listing of results directory ***
2024-06-27 16:56:27 (26232): Guest Log: total 177328
2024-06-27 16:56:27 (26232): Guest Log: -rw-r--r--. 1 atlas atlas    469766 Jun 27 12:31 pilot3.tar.gz
2024-06-27 16:56:27 (26232): Guest Log: -rwx------. 1 atlas atlas     32220 Jun 27 12:39 runpilot2-wrapper.sh
2024-06-27 16:56:27 (26232): Guest Log: -rw-r--r--. 1 atlas atlas      5654 Jun 27 12:39 queuedata.json
2024-06-27 16:56:27 (26232): Guest Log: -rwxr-xr-x. 1 atlas atlas      9359 Jun 27 13:08 init_data.xml
2024-06-27 16:56:27 (26232): Guest Log: -rwxr-xr-x. 1 atlas atlas    482524 Jun 27 13:08 input.tar.gz
2024-06-27 16:56:27 (26232): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 Jun 27 13:08 start_atlas.sh
2024-06-27 16:56:27 (26232): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun 27 13:08 EVNT.34667357._000002.pool.root.1 -> /data/./ATLAS.root_0
2024-06-27 16:56:27 (26232): Guest Log: -rw-r--r--. 1 atlas atlas      2623 Jun 27 13:09 pandaJob.out
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas       452 Jun 27 13:10 setup.sh.local
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas   1034827 Jun 27 13:13 agis_schedconf.cvmfs.json
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas         0 Jun 27 13:13 agis_ddmendpoints.agis.ALL.json
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas   1321363 Jun 27 13:13 cric_ddmendpoints.json
2024-06-27 16:56:27 (26232): Guest Log: drwx------. 4 atlas atlas      4096 Jun 27 13:13 pilot3
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas        95 Jun 27 13:54 pilot_heartbeat.json
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas 177183375 Jun 27 13:54 HITS.40102634._000034.pool.root.1
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas      1029 Jun 27 13:54 memory_monitor_summary.json
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas    269426 Jun 27 13:54 log.40102634._000034.job.log.tgz.1
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas      7720 Jun 27 13:54 heartbeat.json
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas      4457 Jun 27 13:55 pilotlog.txt
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas    196104 Jun 27 13:55 log.40102634._000034.job.log.1
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas       357 Jun 27 13:55 output.list
2024-06-27 16:56:27 (26232): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun 27 13:55 runtime_log
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas    481280 Jun 27 13:55 result.tar.gz
2024-06-27 16:56:27 (26232): Guest Log: -rw-r--r--. 1 atlas atlas     11233 Jun 27 13:55 runtime_log.err
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas       638 Jun 27 13:55 IHrMDmWa3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmrnoKDm4vSjMm.diag
2024-06-27 16:56:27 (26232): Guest Log: Looking for outputfile HITS.40102634._000034.pool.root.1
2024-06-27 16:56:27 (26232): Guest Log: HITS file was successfully produced
2024-06-27 16:56:27 (26232): Guest Log: -rw-------. 1 atlas atlas 177183375 Jun 27 13:54 /home/atlas/RunAtlas/HITS.40102634._000034.pool.root.1
2024-06-27 16:56:29 (26232): Guest Log: Successfully finished the ATLAS job!
2024-06-27 16:56:29 (26232): Guest Log: Copying the results back to the shared directory!
2024-06-27 16:56:29 (26232): Guest Log:  *** Contents of shared directory: ***
2024-06-27 16:56:29 (26232): Guest Log: total 560516
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root 395780987 Jun 27 13:06 ATLAS.root_0
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root 177183375 Jun 27  2024 HITS.pool.root.1
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root      9359 Jun 27 13:06 init_data.xml
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root    482524 Jun 27 12:45 input.tar.gz
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root    481280 Jun 27  2024 result.tar.gz
2024-06-27 16:56:29 (26232): Guest Log: -rwxrwxrwx. 1 root root     17537 Jun 27 12:45 start_atlas.sh
2024-06-27 16:56:29 (26232): Guest Log:  *** Success! Shutting down the machine. ***
2024-06-27 16:56:29 (26232): VM Completion File Detected.
2024-06-27 16:56:29 (26232): Powering off VM.
2024-06-27 16:56:29 (26232): Successfully stopped VM.
2024-06-27 16:56:29 (26232): Deregistering VM. (boinc_2a72164985f2d561, slot#4)
2024-06-27 16:56:29 (26232): Removing network bandwidth throttle group from VM.
2024-06-27 16:56:29 (26232): Removing VM from VirtualBox.
16:56:35 (26232): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN