Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:38:30 (92919): wrapper (7.7.26015): starting
08:38:30 (92919): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 08:38:30] Arguments: --nthreads 8
[2024-06-27 08:38:30] Threads: 8
[2024-06-27 08:38:30] Checking for CVMFS
[2024-06-27 08:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:38:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:38:31] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:38:32] 2.11.2.0 19246 1596 93440 134351 0 547 13690224 18432001 21001 130560 0 8177740 98.957 15317754 31994 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:38:32] CVMFS is ok
[2024-06-27 08:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:38:32] Further information can be found at the LHC@home message board.
[2024-06-27 08:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:38:32] Checking for apptainer binary...
[2024-06-27 08:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:38:32] Running /usr/bin/apptainer --version
[2024-06-27 08:38:33] apptainer version 1.3.1-1.el7
[2024-06-27 08:38:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:38:36] c-212-2.aglt2.org
[2024-06-27 08:38:36] apptainer works
[2024-06-27 08:38:36] Set ATHENA_PROC_NUMBER=8
[2024-06-27 08:38:36] Set ATHENA_CORE_NUMBER=8
[2024-06-27 08:38:37] Starting ATLAS job with PandaID=6246090002
[2024-06-27 08:38:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 12:58:29]  *** The last 200 lines of the pilot log: ***
[2024-06-27 12:58:29] 2024-06-27 16:57:53,394 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:57:55,897 | INFO     | monitor loop #1116: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:57:55,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:57:58,403 | INFO     | monitor loop #1117: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:57:58,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:58:00,908 | INFO     | monitor loop #1118: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:58:00,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:58:03,416 | INFO     | monitor loop #1119: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:58:03,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:58:05,929 | INFO     | monitor loop #1120: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:58:05,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:58:08,439 | INFO     | monitor loop #1121: job 0:6246090002 is in state 'finished'
[2024-06-27 12:58:29] 2024-06-27 16:58:08,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,489 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 12:58:29] 2024-06-27 16:58:09,490 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6246090002/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,490 | INFO     | extracted standard info from prmon json
[2024-06-27 12:58:29] 2024-06-27 16:58:09,491 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 12:58:29] 2024-06-27 16:58:09,491 | WARNING  | GPU info not found in prmon json
[2024-06-27 12:58:29] 2024-06-27 16:58:09,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 12:58:29] 2024-06-27 16:58:09,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 12:58:29] 2024-06-27 16:58:09,499 | INFO     | fitting pss+swap vs Time
[2024-06-27 12:58:29] 2024-06-27 16:58:09,499 | INFO     | model: linear, x: [1719492159.0, 1719492220.0, 1719492281.0, 1719492342.0, 1719492403.0, 1719492464.0, 1719492525.0, 1719492586.0, 1719492647.0, 1719492708.0, 1719
[2024-06-27 12:58:29] 2024-06-27 16:58:09,500 | INFO     | sum of square deviations: 4903350443.601613
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | sum of deviations: 409933044006.1352
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | mean x: 1719499784.0398407
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | mean y: 2215008.386454183
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | -- intersect: -143752507144.73688
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | intersect: -143752507144.73688
[2024-06-27 12:58:29] 2024-06-27 16:58:09,505 | INFO     | chi2: 15.791127675598489
[2024-06-27 12:58:29] 2024-06-27 16:58:09,506 | INFO     | model: linear, x: [1719492159.0, 1719492220.0, 1719492281.0, 1719492342.0, 1719492403.0, 1719492464.0, 1719492525.0, 1719492586.0, 1719492647.0, 1719492708.0, 1719
[2024-06-27 12:58:29] 2024-06-27 16:58:09,506 | INFO     | sum of square deviations: 4616120201.093464
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | sum of deviations: 416999416635.7032
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | mean x: 1719499631.5406504
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | mean y: 2218614.9796747966
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | -- intersect: -155329599453.3427
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | intersect: -155329599453.3427
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | chi2: 14.809273117517545
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | current chi2=14.809273117517545 (change=6.217760873393298 %)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,507 | INFO     | right removable region: 245
[2024-06-27 12:58:29] 2024-06-27 16:58:09,508 | INFO     | model: linear, x: [1719492464.0, 1719492525.0, 1719492586.0, 1719492647.0, 1719492708.0, 1719492769.0, 1719492830.0, 1719492891.0, 1719492952.0, 1719493013.0, 1719
[2024-06-27 12:58:29] 2024-06-27 16:58:09,508 | INFO     | sum of square deviations: 4616114101.093464
[2024-06-27 12:58:29] 2024-06-27 16:58:09,513 | INFO     | sum of deviations: 337792544859.6262
[2024-06-27 12:58:29] 2024-06-27 16:58:09,513 | INFO     | mean x: 1719499936.5406504
[2024-06-27 12:58:29] 2024-06-27 16:58:09,513 | INFO     | mean y: 2253264.837398374
[2024-06-27 12:58:29] 2024-06-27 16:58:09,513 | INFO     | -- intersect: -125825281915.11931
[2024-06-27 12:58:29] 2024-06-27 16:58:09,513 | INFO     | intersect: -125825281915.11931
[2024-06-27 12:58:29] 2024-06-27 16:58:09,514 | INFO     | chi2: 11.980819905116668
[2024-06-27 12:58:29] 2024-06-27 16:58:09,514 | INFO     | current chi2=11.980819905116668 (change=24.12942158886958 %)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,514 | INFO     | left removable region: 10
[2024-06-27 12:58:29] 2024-06-27 16:58:09,514 | INFO     | model: linear, x: [1719492769.0, 1719492830.0, 1719492891.0, 1719492952.0, 1719493013.0, 1719493074.0, 1719493135.0, 1719493196.0, 1719493257.0, 1719493318.0, 1719
[2024-06-27 12:58:29] 2024-06-27 16:58:09,514 | INFO     | sum of square deviations: 4024150123.574455
[2024-06-27 12:58:29] 2024-06-27 16:58:09,515 | INFO     | sum of deviations: 291996658603.5745
[2024-06-27 12:58:29] 2024-06-27 16:58:09,515 | INFO     | mean x: 1719499906.0425532
[2024-06-27 12:58:29] 2024-06-27 16:58:09,515 | INFO     | mean y: 2287288.8425531914
[2024-06-27 12:58:29] 2024-06-27 16:58:09,515 | INFO     | -- intersect: -124766474217.40204
[2024-06-27 12:58:29] 2024-06-27 16:58:09,515 | INFO     | intersect: -124766474217.40204
[2024-06-27 12:58:29] 2024-06-27 16:58:09,516 | INFO     | chi2: 9.34705345375043
[2024-06-27 12:58:29] 2024-06-27 16:58:09,516 | INFO     | -- intersect: -124766474217.40204
[2024-06-27 12:58:29] 2024-06-27 16:58:09,516 | INFO     | current memory leak: 72.56 B/s (using 235 data points, chi2=9.35)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | ..............................
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . Timing measurements:
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . get job = 0 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . initial setup = 3 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . payload setup = 53 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . stage-in = 0 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . payload execution = 15335 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . stage-out = 4 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | . log creation = 0 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,521 | INFO     | ..............................
[2024-06-27 12:58:29] 2024-06-27 16:58:09,978 | INFO     | 
[2024-06-27 12:58:29] 2024-06-27 16:58:09,978 | INFO     | job summary report
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | --------------------------------------------------
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | PanDA job id: 6246090002
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | task id: 40102759
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | errors: (none)
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | pilot state: finished 
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | transexitcode: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | exeerrorcode: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | exeerrordiag: 
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | exitcode: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | exitmsg: OK
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | cpuconsumptiontime: 37555 s
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | nevents: 400
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | neventsw: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:09,979 | INFO     | pid: 55126
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | pgrp: 55126
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | corecount: 8
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | event service: False
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | sizes: {0: 2385487, 1: 2387023, 2: 2387023, 13: 2387051, 23: 2387107, 31: 2387341, 34: 2387497, 15392: 2418153, 15397: 2427113, 15398: 2427169, 15443: 2427339}
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | --------------------------------------------------
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | 
[2024-06-27 12:58:29] 2024-06-27 16:58:09,980 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-27 12:58:29] 2024-06-27 16:58:10,008 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,008 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,008 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 12:58:29] 2024-06-27 16:58:10,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,011 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 12:58:29] 2024-06-27 16:58:10,011 | INFO     | job 6246090002 has completed (purged errors)
[2024-06-27 12:58:29] 2024-06-27 16:58:10,011 | INFO     | overall cleanup function is called
[2024-06-27 12:58:29] 2024-06-27 16:58:11,021 | INFO     | --- collectZombieJob: --- 10, [55126]
[2024-06-27 12:58:29] 2024-06-27 16:58:11,021 | INFO     | zombie collector waiting for pid 55126
[2024-06-27 12:58:29] 2024-06-27 16:58:11,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 12:58:29] 2024-06-27 16:58:12,037 | INFO     | collected zombie processes
[2024-06-27 12:58:29] 2024-06-27 16:58:12,037 | INFO     | will now attempt to kill all subprocesses of pid=55126
[2024-06-27 12:58:29] 2024-06-27 16:58:12,671 | INFO     | process IDs to be killed: [55126] (in reverse order)
[2024-06-27 12:58:29] 2024-06-27 16:58:12,916 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 12:58:29] 2024-06-27 16:58:12,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 12:58:29] 2024-06-27 16:58:12,928 | INFO     | did not find any defunct processes belonging to 55126
[2024-06-27 12:58:29] 2024-06-27 16:58:12,938 | INFO     | did not find any defunct processes belonging to 55126
[2024-06-27 12:58:29] 2024-06-27 16:58:12,938 | INFO     | ready for new job
[2024-06-27 12:58:29] 2024-06-27 16:58:12,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 12:58:29] 2024-06-27 16:58:12,940 | INFO     | *************************************
[2024-06-27 12:58:29] 2024-06-27 16:58:12,940 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 12:58:29] 2024-06-27 16:58:12,940 | INFO     | *************************************
[2024-06-27 12:58:29] 2024-06-27 16:58:12,940 | INFO     | 
[2024-06-27 12:58:29] 2024-06-27 16:58:12,944 | INFO     | architecture information:
[2024-06-27 12:58:29] 2024-06-27 16:58:12,945 | INFO     | executing command: cat /etc/os-release
[2024-06-27 12:58:29] 2024-06-27 16:58:13,098 | INFO     | cat /etc/os-release:
[2024-06-27 12:58:29] NAME="CentOS Linux"
[2024-06-27 12:58:29] VERSION="7 (Core)"
[2024-06-27 12:58:29] ID="centos"
[2024-06-27 12:58:29] ID_LIKE="rhel fedora"
[2024-06-27 12:58:29] VERSION_ID="7"
[2024-06-27 12:58:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 12:58:29] ANSI_COLOR="0;31"
[2024-06-27 12:58:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 12:58:29] HOME_URL="https://www.centos.org/"
[2024-06-27 12:58:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 12:58:29] 
[2024-06-27 12:58:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 12:58:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 12:58:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 12:58:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 12:58:29] 
[2024-06-27 12:58:29] 2024-06-27 16:58:13,098 | INFO     | *************************************
[2024-06-27 12:58:29] 2024-06-27 16:58:13,601 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-27 12:58:29] 2024-06-27 16:58:13,620 | INFO     | sufficient remaining disk space (101954093056 B)
[2024-06-27 12:58:29] 2024-06-27 16:58:13,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 12:58:29] 2024-06-27 16:58:13,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 12:58:29] 2024-06-27 16:58:13,621 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 12:58:29] 2024-06-27 16:58:13,622 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 12:58:29] 2024-06-27 16:58:13,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 12:58:29] 2024-06-27 16:58:13,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 12:58:29] 2024-06-27 16:58:13,820 | INFO     | all data control threads have been joined
[2024-06-27 12:58:29] 2024-06-27 16:58:13,825 | INFO     | all job control threads have been joined
[2024-06-27 12:58:29] 2024-06-27 16:58:14,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 12:58:29] 2024-06-27 16:58:14,395 | INFO     | all payload control threads have been joined
[2024-06-27 12:58:29] 2024-06-27 16:58:14,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:58:29] 2024-06-27 16:58:14,467 | INFO     | aborting loop
[2024-06-27 12:58:29] 2024-06-27 16:58:14,625 | INFO     | [job] retrieve thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,637 | INFO     | [payload] failed_post thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,648 | INFO     | [payload] validate_post thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 12:58:29] 2024-06-27 16:58:14,824 | INFO     | [data] control thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,831 | INFO     | [job] control thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,987 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,994 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:14,998 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,109 | INFO     | [data] copytool_in thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,360 | INFO     | [job] validate thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,401 | INFO     | [payload] control thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,473 | INFO     | [job] job monitor thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,818 | INFO     | [job] queue monitor thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:15,900 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:16,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 12:58:29] 2024-06-27 16:58:16,127 | INFO     | [data] copytool_out thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:20,075 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 12:58:29] 2024-06-27 16:58:20,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140252914251584)>', '<ExcThread(monitor, started 140252349982464)>']
[2024-06-27 12:58:29] 2024-06-27 16:58:21,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 12:58:29] 2024-06-27 16:58:21,704 | INFO     | [monitor] control thread has ended
[2024-06-27 12:58:29] 2024-06-27 16:58:26,005 | INFO     | all workflow threads have been joined
[2024-06-27 12:58:29] 2024-06-27 16:58:26,005 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 12:58:29] 2024-06-27 16:58:26,006 | INFO     | traces error code: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:26,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 12:58:29] 2024-06-27 16:58:26,595 [wrapper] ==== pilot stdout END ====
[2024-06-27 12:58:29] 2024-06-27 16:58:26,631 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 12:58:29] 2024-06-27 16:58:26,678 [wrapper] pilotpid: 14845
[2024-06-27 12:58:29] 2024-06-27 16:58:26,718 [wrapper] Pilot exit status: 0
[2024-06-27 12:58:29] 2024-06-27 16:58:26,813 [wrapper] pandaids: 6246090002
[2024-06-27 12:58:29] 2024-06-27 16:58:27,645 [wrapper] cleanup supervisor_pilot 87583 14846
[2024-06-27 12:58:29] 2024-06-27 16:58:27,648 [wrapper] Test setup, not cleaning
[2024-06-27 12:58:29] 2024-06-27 16:58:27,650 [wrapper] ==== wrapper stdout END ====
[2024-06-27 12:58:29] 2024-06-27 16:58:27,652 [wrapper] ==== wrapper stderr END ====
[2024-06-27 12:58:29] 2024-06-27 16:58:27,668 [wrapper] apfmon messages muted
[2024-06-27 12:58:29]  *** Error codes and diagnostics ***
[2024-06-27 12:58:29]     "exeErrorCode": 0,
[2024-06-27 12:58:29]     "exeErrorDiag": "",
[2024-06-27 12:58:29]     "pilotErrorCode": 0,
[2024-06-27 12:58:29]     "pilotErrorDiag": "",
[2024-06-27 12:58:29]  *** Listing of results directory ***
[2024-06-27 12:58:29] total 563984
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 08:31 pilot3.tar.gz
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:36 queuedata.json
[2024-06-27 12:58:29] -rwx------ 1 boincer umatlas     32220 Jun 27 08:37 runpilot2-wrapper.sh
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 12:58:29] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:38 run_atlas
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:38 job.xml
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas 393282782 Jun 27 08:38 EVNT.34668092._000001.pool.root.1
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:38 start_atlas.sh
[2024-06-27 12:58:29] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:38 shared
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas    482485 Jun 27 08:38 input.tar.gz
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:38 boinc_lockfile
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas      2592 Jun 27 08:38 pandaJob.out
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas       467 Jun 27 08:38 setup.sh.local
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas   1034827 Jun 27 08:39 agis_schedconf.cvmfs.json
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas   1321363 Jun 27 08:39 cric_ddmendpoints.json
[2024-06-27 12:58:29] drwx------ 4 boincer umatlas      4096 Jun 27 08:39 pilot3
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas      6388 Jun 27 12:56 init_data.xml
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas 177166180 Jun 27 12:56 HITS.40102759._000001.pool.root.1
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas       531 Jun 27 12:56 boinc_task_state.xml
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas      1088 Jun 27 12:57 memory_monitor_summary.json
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas         0 Jun 27 12:57 agis_ddmendpoints.agis.ALL.json
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas    392218 Jun 27 12:57 log.40102759._000001.job.log.tgz.1
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas        95 Jun 27 12:57 pilot_heartbeat.json
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas      7745 Jun 27 12:58 heartbeat.json
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 12:58 boinc_mmap_file
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas        28 Jun 27 12:58 wrapper_checkpoint.txt
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas      4335 Jun 27 12:58 pilotlog.txt
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas   1371721 Jun 27 12:58 log.40102759._000001.job.log.1
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas       357 Jun 27 12:58 output.list
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas       620 Jun 27 12:58 runtime_log
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas   1781760 Jun 27 12:58 result.tar.gz
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas       650 Jun 27 12:58 YOmKDmPY3g5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmKnoKDmtInMem.diag
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas     11400 Jun 27 12:58 runtime_log.err
[2024-06-27 12:58:29] -rw-r--r-- 1 boincer umatlas     21932 Jun 27 12:58 stderr.txt
[2024-06-27 12:58:29] HITS file was successfully produced:
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas 177166180 Jun 27 12:56 shared/HITS.pool.root.1
[2024-06-27 12:58:29]  *** Contents of shared directory: ***
[2024-06-27 12:58:29] total 559324
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas 393282782 Jun 27 08:38 ATLAS.root_0
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:38 start_atlas.sh
[2024-06-27 12:58:29] -rw-r--r-- 2 boincer umatlas    482485 Jun 27 08:38 input.tar.gz
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas 177166180 Jun 27 12:56 HITS.pool.root.1
[2024-06-27 12:58:29] -rw------- 1 boincer umatlas   1781760 Jun 27 12:58 result.tar.gz
12:58:30 (92919): run_atlas exited; CPU time 36485.678760
12:58:30 (92919): called boinc_finish(0)

</stderr_txt>
]]>

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