Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:24 (31061): wrapper (7.7.26015): starting
08:02:24 (31061): wrapper: running run_atlas (--nthreads 12)
[2024-06-27 08:02:24] Arguments: --nthreads 12
[2024-06-27 08:02:24] Threads: 12
[2024-06-27 08:02:24] Checking for CVMFS
[2024-06-27 08:02:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 08:02:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 08:02:24] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 08:02:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 08:02:25] 2.11.2.0 9327 53877 99868 134351 1 186 16314373 18432000 5380 130560 0 11249644 98.732 29935643 29247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 08:02:25] CVMFS is ok
[2024-06-27 08:02:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 08:02:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 08:02:25] Further information can be found at the LHC@home message board.
[2024-06-27 08:02:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 08:02:25] Checking for apptainer binary...
[2024-06-27 08:02:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 08:02:25] Running /usr/bin/apptainer --version
[2024-06-27 08:02:25] apptainer version 1.3.1-1.el7
[2024-06-27 08:02:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 08:02:28] c-206-5.aglt2.org
[2024-06-27 08:02:28] apptainer works
[2024-06-27 08:02:28] Set ATHENA_PROC_NUMBER=12
[2024-06-27 08:02:28] Set ATHENA_CORE_NUMBER=12
[2024-06-27 08:02:28] Starting ATLAS job with PandaID=6246057296
[2024-06-27 08:02:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 15:48:50]  *** The last 200 lines of the pilot log: ***
[2024-06-28 15:48:50] 2024-06-28 19:48:27,076 | INFO     | this job has now completed (state=finished)
[2024-06-28 15:48:50] 2024-06-28 19:48:27,076 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-28 15:48:50] 2024-06-28 19:48:27,076 | INFO     | job 6246057296 has finished - writing final server update
[2024-06-28 15:48:50] 2024-06-28 19:48:27,077 | INFO     | total number of processed events: 400 (read)
[2024-06-28 15:48:50] 2024-06-28 19:48:27,078 | INFO     | executing command: lscpu
[2024-06-28 15:48:50] 2024-06-28 19:48:27,135 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2024-06-28 15:48:50] 2024-06-28 19:48:27,136 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-28 15:48:50] 2024-06-28 19:48:27,193 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-28 15:48:51] 2024-06-28 19:48:28,053 | INFO     | monitor loop #6852: job 0:6246057296 is in state 'finished'
[2024-06-28 15:48:51] 2024-06-28 19:48:28,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-28 15:48:51] 2024-06-28 19:48:30,557 | INFO     | monitor loop #6853: job 0:6246057296 is in state 'finished'
[2024-06-28 15:48:51] 2024-06-28 19:48:30,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-28 15:48:51] 2024-06-28 19:48:32,630 | INFO     | CPU arch script returned: x86-64-v2
[2024-06-28 15:48:51] 2024-06-28 19:48:32,630 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6246057296/memory_monitor_summary.json (trf name=prmon)
[2024-06-28 15:48:51] 2024-06-28 19:48:32,632 | INFO     | extracted standard info from prmon json
[2024-06-28 15:48:51] 2024-06-28 19:48:32,632 | INFO     | extracted standard memory fields from prmon json
[2024-06-28 15:48:51] 2024-06-28 19:48:32,632 | WARNING  | GPU info not found in prmon json
[2024-06-28 15:48:51] 2024-06-28 19:48:32,632 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-28 15:48:51] 2024-06-28 19:48:32,633 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-28 15:48:51] 2024-06-28 19:48:32,689 | INFO     | fitting pss+swap vs Time
[2024-06-28 15:48:51] 2024-06-28 19:48:32,691 | INFO     | model: linear, x: [1719489800.0, 1719489861.0, 1719489922.0, 1719489983.0, 1719490044.0, 1719490105.0, 1719490166.0, 1719490227.0, 1719490288.0, 1719490349.0, 1719
[2024-06-28 15:48:51] 2024-06-28 19:48:32,694 | INFO     | sum of square deviations: 2040730468282.078
[2024-06-28 15:48:51] 2024-06-28 19:48:32,837 | INFO     | sum of deviations: 3013254488657.842
[2024-06-28 15:48:51] 2024-06-28 19:48:32,837 | INFO     | mean x: 1719546927.7449307
[2024-06-28 15:48:51] 2024-06-28 19:48:32,838 | INFO     | mean y: 2696012.035218783
[2024-06-28 15:48:51] 2024-06-28 19:48:32,838 | INFO     | -- intersect: -2536312729.6958895
[2024-06-28 15:48:51] 2024-06-28 19:48:32,838 | INFO     | intersect: -2536312729.6958895
[2024-06-28 15:48:51] 2024-06-28 19:48:32,841 | INFO     | chi2: 19.96495788992582
[2024-06-28 15:48:51] 2024-06-28 19:48:32,843 | INFO     | model: linear, x: [1719489800.0, 1719489861.0, 1719489922.0, 1719489983.0, 1719490044.0, 1719490105.0, 1719490166.0, 1719490227.0, 1719490288.0, 1719490349.0, 1719
[2024-06-28 15:48:51] 2024-06-28 19:48:32,844 | INFO     | sum of square deviations: 2024440111596.8088
[2024-06-28 15:48:51] 2024-06-28 19:48:32,946 | INFO     | sum of deviations: 3707034139462.9683
[2024-06-28 15:48:51] 2024-06-28 19:48:32,947 | INFO     | mean x: 1719546775.2482612
[2024-06-28 15:48:51] 2024-06-28 19:48:32,947 | INFO     | mean y: 2702506.758694489
[2024-06-28 15:48:51] 2024-06-28 19:48:32,947 | INFO     | -- intersect: -3146029117.226387
[2024-06-28 15:48:51] 2024-06-28 19:48:32,947 | INFO     | intersect: -3146029117.226387
[2024-06-28 15:48:51] 2024-06-28 19:48:32,949 | INFO     | chi2: 15.95137685360337
[2024-06-28 15:48:51] 2024-06-28 19:48:32,949 | INFO     | current chi2=15.95137685360337 (change=20.103127982792664 %)
[2024-06-28 15:48:51] 2024-06-28 19:48:32,949 | INFO     | right removable region: 1868
[2024-06-28 15:48:51] 2024-06-28 19:48:32,950 | INFO     | model: linear, x: [1719490105.0, 1719490166.0, 1719490227.0, 1719490288.0, 1719490349.0, 1719490410.0, 1719490471.0, 1719490532.0, 1719490593.0, 1719490654.0, 1719
[2024-06-28 15:48:51] 2024-06-28 19:48:32,951 | INFO     | sum of square deviations: 2024438688466.806
[2024-06-28 15:48:51] 2024-06-28 19:48:33,065 | INFO     | monitor loop #6854: job 0:6246057296 is in state 'finished'
[2024-06-28 15:48:51] 2024-06-28 19:48:33,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,083 | INFO     | sum of deviations: 2398296847438.3438
[2024-06-28 15:48:51] 2024-06-28 19:48:33,084 | INFO     | mean x: 1719547080.2482612
[2024-06-28 15:48:51] 2024-06-28 19:48:33,084 | INFO     | mean y: 2701767.1845906903
[2024-06-28 15:48:51] 2024-06-28 19:48:33,084 | INFO     | -- intersect: -2034398375.721927
[2024-06-28 15:48:51] 2024-06-28 19:48:33,084 | INFO     | intersect: -2034398375.721927
[2024-06-28 15:48:51] 2024-06-28 19:48:33,087 | INFO     | chi2: 16.57318448316898
[2024-06-28 15:48:51] 2024-06-28 19:48:33,087 | INFO     | current chi2=16.57318448316898 (change=16.988632911008068 %)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,087 | INFO     | left removable region: 10
[2024-06-28 15:48:51] 2024-06-28 19:48:33,089 | INFO     | model: linear, x: [1719490410.0, 1719490471.0, 1719490532.0, 1719490593.0, 1719490654.0, 1719490715.0, 1719490776.0, 1719490837.0, 1719490898.0, 1719490959.0, 1719
[2024-06-28 15:48:51] 2024-06-28 19:48:33,090 | INFO     | sum of square deviations: 1988904153337.0652
[2024-06-28 15:48:51] 2024-06-28 19:48:33,189 | INFO     | sum of deviations: 2764894696247.351
[2024-06-28 15:48:51] 2024-06-28 19:48:33,189 | INFO     | mean x: 1719547049.7556512
[2024-06-28 15:48:51] 2024-06-28 19:48:33,189 | INFO     | mean y: 2714106.895048439
[2024-06-28 15:48:51] 2024-06-28 19:48:33,190 | INFO     | -- intersect: -2387731159.0772247
[2024-06-28 15:48:51] 2024-06-28 19:48:33,190 | INFO     | intersect: -2387731159.0772247
[2024-06-28 15:48:51] 2024-06-28 19:48:33,192 | INFO     | chi2: 9.759703609882191
[2024-06-28 15:48:51] 2024-06-28 19:48:33,193 | INFO     | -- intersect: -2387731159.0772247
[2024-06-28 15:48:51] 2024-06-28 19:48:33,193 | INFO     | current memory leak: 1.39 B/s (using 1858 data points, chi2=9.76)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,194 | INFO     | ..............................
[2024-06-28 15:48:51] 2024-06-28 19:48:33,194 | INFO     | . Timing measurements:
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . get job = 0 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . initial setup = 2 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . payload setup = 9 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . stage-in = 0 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . payload execution = 114299 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . stage-out = 10 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,195 | INFO     | . log creation = 4 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,196 | INFO     | ..............................
[2024-06-28 15:48:51] 2024-06-28 19:48:33,343 | INFO     | 
[2024-06-28 15:48:51] 2024-06-28 19:48:33,348 | INFO     | job summary report
[2024-06-28 15:48:51] 2024-06-28 19:48:33,348 | INFO     | --------------------------------------------------
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | PanDA job id: 6246057296
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | task id: 38921013
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | errors: (none)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | pilot state: finished 
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | transexitcode: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:33,349 | INFO     | exeerrorcode: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | exeerrordiag: 
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | exitcode: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | exitmsg: OK
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | cpuconsumptiontime: 366314 s
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | nevents: 400
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | neventsw: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:33,350 | INFO     | pid: 10704
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | pgrp: 10704
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | corecount: 12
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | event service: False
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | sizes: {0: 2387079, 1: 2387107, 6: 2387313, 12: 2387341, 114312: 2460355, 114313: 2460354, 114324: 2469554, 114332: 2469668}
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | --------------------------------------------------
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | 
[2024-06-28 15:48:51] 2024-06-28 19:48:33,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-28 15:48:51] 2024-06-28 19:48:33,377 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,377 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,377 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,380 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,380 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 15:48:51] 2024-06-28 19:48:33,380 | INFO     | job 6246057296 has completed (purged errors)
[2024-06-28 15:48:51] 2024-06-28 19:48:33,380 | INFO     | overall cleanup function is called
[2024-06-28 15:48:51] 2024-06-28 19:48:34,393 | INFO     | --- collectZombieJob: --- 10, [10704]
[2024-06-28 15:48:51] 2024-06-28 19:48:34,394 | INFO     | zombie collector waiting for pid 10704
[2024-06-28 15:48:51] 2024-06-28 19:48:34,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 15:48:51] 2024-06-28 19:48:35,399 | INFO     | collected zombie processes
[2024-06-28 15:48:51] 2024-06-28 19:48:35,399 | INFO     | will now attempt to kill all subprocesses of pid=10704
[2024-06-28 15:48:51] 2024-06-28 19:48:35,577 | INFO     | process IDs to be killed: [10704] (in reverse order)
[2024-06-28 15:48:51] 2024-06-28 19:48:35,651 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 15:48:51] 2024-06-28 19:48:35,652 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 15:48:51] 2024-06-28 19:48:35,660 | INFO     | did not find any defunct processes belonging to 10704
[2024-06-28 15:48:51] 2024-06-28 19:48:35,668 | INFO     | did not find any defunct processes belonging to 10704
[2024-06-28 15:48:51] 2024-06-28 19:48:35,670 | INFO     | ready for new job
[2024-06-28 15:48:51] 2024-06-28 19:48:35,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 15:48:51] 2024-06-28 19:48:35,680 | INFO     | *************************************
[2024-06-28 15:48:51] 2024-06-28 19:48:35,680 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 15:48:51] 2024-06-28 19:48:35,680 | INFO     | *************************************
[2024-06-28 15:48:51] 2024-06-28 19:48:35,681 | INFO     | 
[2024-06-28 15:48:51] 2024-06-28 19:48:35,682 | INFO     | architecture information:
[2024-06-28 15:48:51] 2024-06-28 19:48:35,683 | INFO     | executing command: cat /etc/os-release
[2024-06-28 15:48:51] 2024-06-28 19:48:35,709 | INFO     | cat /etc/os-release:
[2024-06-28 15:48:51] NAME="CentOS Linux"
[2024-06-28 15:48:51] VERSION="7 (Core)"
[2024-06-28 15:48:51] ID="centos"
[2024-06-28 15:48:51] ID_LIKE="rhel fedora"
[2024-06-28 15:48:51] VERSION_ID="7"
[2024-06-28 15:48:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 15:48:51] ANSI_COLOR="0;31"
[2024-06-28 15:48:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 15:48:51] HOME_URL="https://www.centos.org/"
[2024-06-28 15:48:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 15:48:51] 
[2024-06-28 15:48:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 15:48:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 15:48:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 15:48:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 15:48:51] 
[2024-06-28 15:48:51] 2024-06-28 19:48:35,710 | INFO     | *************************************
[2024-06-28 15:48:51] 2024-06-28 19:48:36,213 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-28 15:48:51] 2024-06-28 19:48:36,241 | INFO     | sufficient remaining disk space (28496101376 B)
[2024-06-28 15:48:51] 2024-06-28 19:48:36,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 15:48:51] 2024-06-28 19:48:36,242 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 15:48:51] 2024-06-28 19:48:36,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 15:48:51] 2024-06-28 19:48:36,286 | INFO     | all data control threads have been joined
[2024-06-28 15:48:51] 2024-06-28 19:48:36,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 15:48:51] 2024-06-28 19:48:36,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 15:48:51] 2024-06-28 19:48:36,591 | INFO     | aborting loop
[2024-06-28 15:48:51] 2024-06-28 19:48:36,665 | INFO     | all payload control threads have been joined
[2024-06-28 15:48:51] 2024-06-28 19:48:37,115 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 15:48:51] 2024-06-28 19:48:37,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 15:48:51] 2024-06-28 19:48:37,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 15:48:51] 2024-06-28 19:48:37,184 | INFO     | all job control threads have been joined
[2024-06-28 15:48:51] 2024-06-28 19:48:37,249 | INFO     | [job] retrieve thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,281 | INFO     | [payload] validate_post thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,295 | INFO     | [data] control thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,587 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,635 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,629 | INFO     | [job] job monitor thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,670 | INFO     | [payload] control thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:37,754 | INFO     | [data] copytool_in thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,189 | INFO     | [job] control thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,208 | INFO     | [payload] failed_post thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,248 | INFO     | [data] copytool_out thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 15:48:51] 2024-06-28 19:48:38,543 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,551 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:38,556 | INFO     | [job] validate thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:39,354 | INFO     | [job] queue monitor thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:40,322 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 15:48:51] 2024-06-28 19:48:40,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393386022720)>', '<ExcThread(monitor, started 140392649438976)>']
[2024-06-28 15:48:51] 2024-06-28 19:48:41,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 15:48:51] 2024-06-28 19:48:41,130 | INFO     | [monitor] control thread has ended
[2024-06-28 15:48:51] 2024-06-28 19:48:45,690 | INFO     | all workflow threads have been joined
[2024-06-28 15:48:51] 2024-06-28 19:48:45,690 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 15:48:51] 2024-06-28 19:48:45,690 | INFO     | traces error code: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:45,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 15:48:51] 2024-06-28 19:48:47,778 [wrapper] ==== pilot stdout END ====
[2024-06-28 15:48:51] 2024-06-28 19:48:47,803 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 15:48:51] 2024-06-28 19:48:47,806 [wrapper] pilotpid: 3416
[2024-06-28 15:48:51] 2024-06-28 19:48:47,808 [wrapper] Pilot exit status: 0
[2024-06-28 15:48:51] 2024-06-28 19:48:47,948 [wrapper] pandaids: 6246057296
[2024-06-28 15:48:51] 2024-06-28 19:48:48,068 [wrapper] cleanup supervisor_pilot 17190 3417
[2024-06-28 15:48:51] 2024-06-28 19:48:48,071 [wrapper] Test setup, not cleaning
[2024-06-28 15:48:51] 2024-06-28 19:48:48,076 [wrapper] ==== wrapper stdout END ====
[2024-06-28 15:48:51] 2024-06-28 19:48:48,082 [wrapper] ==== wrapper stderr END ====
[2024-06-28 15:48:51] 2024-06-28 19:48:48,088 [wrapper] apfmon messages muted
[2024-06-28 15:48:51]  *** Error codes and diagnostics ***
[2024-06-28 15:48:51]     "exeErrorCode": 0,
[2024-06-28 15:48:51]     "exeErrorDiag": "",
[2024-06-28 15:48:51]     "pilotErrorCode": 0,
[2024-06-28 15:48:51]     "pilotErrorDiag": "",
[2024-06-28 15:48:51]  *** Listing of results directory ***
[2024-06-28 15:48:51] total 896124
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 07:25 pilot3.tar.gz
[2024-06-28 15:48:51] -rwx------ 1 boincer umatlas     32220 Jun 27 08:01 runpilot2-wrapper.sh
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 08:01 queuedata.json
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas       100 Jun 27 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 15:48:51] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 08:02 run_atlas
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas       105 Jun 27 08:02 job.xml
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas 540828686 Jun 27 08:02 EVNT.38776210._000433.pool.root.1
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:02 start_atlas.sh
[2024-06-28 15:48:51] drwxrwx--x 2 boincer umatlas      4096 Jun 27 08:02 shared
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas    482522 Jun 27 08:02 input.tar.gz
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas         0 Jun 27 08:02 boinc_lockfile
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas      2645 Jun 27 08:02 pandaJob.out
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas       467 Jun 27 08:02 setup.sh.local
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas   1034827 Jun 27 08:02 agis_schedconf.cvmfs.json
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas   1321363 Jun 27 08:02 cric_ddmendpoints.json
[2024-06-28 15:48:51] drwx------ 4 boincer umatlas      4096 Jun 27 08:02 pilot3
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas      5953 Jun 28 15:37 init_data.xml
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas 341556173 Jun 28 15:40 HITS.38921013._055676.pool.root.1
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas       534 Jun 28 15:42 boinc_task_state.xml
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas      1077 Jun 28 15:48 memory_monitor_summary.json
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas         0 Jun 28 15:48 agis_ddmendpoints.agis.ALL.json
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas   2176115 Jun 28 15:48 log.38921013._055676.job.log.tgz.1
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas        95 Jun 28 15:48 pilot_heartbeat.json
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas      7826 Jun 28 15:48 heartbeat.json
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas      8192 Jun 28 15:48 boinc_mmap_file
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas        30 Jun 28 15:48 wrapper_checkpoint.txt
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas      4211 Jun 28 15:48 pilotlog.txt
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas  13672399 Jun 28 15:48 log.38921013._055676.job.log.1
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas       357 Jun 28 15:48 output.list
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas       620 Jun 28 15:48 runtime_log
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas  15872000 Jun 28 15:48 result.tar.gz
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas       659 Jun 28 15:48 VjFKDmpz2g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmhCZKDm2G52Tm.diag
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas     11403 Jun 28 15:48 runtime_log.err
[2024-06-28 15:48:51] -rw-r--r-- 1 boincer umatlas     21840 Jun 28 15:48 stderr.txt
[2024-06-28 15:48:51] HITS file was successfully produced:
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas 341556173 Jun 28 15:40 shared/HITS.pool.root.1
[2024-06-28 15:48:51]  *** Contents of shared directory: ***
[2024-06-28 15:48:51] total 877708
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas 540828686 Jun 27 08:02 ATLAS.root_0
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 08:02 start_atlas.sh
[2024-06-28 15:48:51] -rw-r--r-- 2 boincer umatlas    482522 Jun 27 08:02 input.tar.gz
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas 341556173 Jun 28 15:40 HITS.pool.root.1
[2024-06-28 15:48:51] -rw------- 1 boincer umatlas  15872000 Jun 28 15:48 result.tar.gz
15:48:52 (31061): run_atlas exited; CPU time 364999.493592
15:48:52 (31061): called boinc_finish(0)

</stderr_txt>
]]>

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