Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:48:54 (92711): wrapper (7.7.26015): starting
07:48:54 (92711): wrapper: running run_atlas (--nthreads 8)
[2024-06-27 07:48:54] Arguments: --nthreads 8
[2024-06-27 07:48:54] Threads: 8
[2024-06-27 07:48:54] Checking for CVMFS
[2024-06-27 07:48:54] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-27 07:48:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-27 07:48:54] Running cvmfs_config stat atlas.cern.ch
[2024-06-27 07:48:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-27 07:48:54] 2.11.2.0 19246 1547 89724 134351 2 540 17596492 18432000 17720 130560 0 7936685 99.021 14647557 31743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-27 07:48:54] CVMFS is ok
[2024-06-27 07:48:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 07:48:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 07:48:54] Further information can be found at the LHC@home message board.
[2024-06-27 07:48:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 07:48:54] Checking for apptainer binary...
[2024-06-27 07:48:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-27 07:48:54] Running /usr/bin/apptainer --version
[2024-06-27 07:48:54] apptainer version 1.3.1-1.el7
[2024-06-27 07:48:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 07:48:56] c-212-2.aglt2.org
[2024-06-27 07:48:56] apptainer works
[2024-06-27 07:48:56] Set ATHENA_PROC_NUMBER=8
[2024-06-27 07:48:56] Set ATHENA_CORE_NUMBER=8
[2024-06-27 07:48:56] Starting ATLAS job with PandaID=6246049069
[2024-06-27 07:48:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 18:03:45]  *** The last 200 lines of the pilot log: ***
[2024-06-27 18:03:45] 2024-06-27 22:03:19,314 | INFO     | total number of processed events: 400 (read)
[2024-06-27 18:03:45] 2024-06-27 22:03:19,356 | INFO     | executing command: lscpu
[2024-06-27 18:03:45] 2024-06-27 22:03:19,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-27 18:03:45] 2024-06-27 22:03:19,420 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-27 18:03:45] 2024-06-27 22:03:19,465 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-27 18:03:45] 2024-06-27 22:03:21,127 | INFO     | monitor loop #2632: job 0:6246049069 is in state 'finished'
[2024-06-27 18:03:45] 2024-06-27 22:03:21,127 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 18:03:45] 2024-06-27 22:03:23,631 | INFO     | monitor loop #2633: job 0:6246049069 is in state 'finished'
[2024-06-27 18:03:45] 2024-06-27 22:03:23,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 18:03:45] 2024-06-27 22:03:26,136 | INFO     | monitor loop #2634: job 0:6246049069 is in state 'finished'
[2024-06-27 18:03:45] 2024-06-27 22:03:26,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 18:03:45] 2024-06-27 22:03:28,640 | INFO     | monitor loop #2635: job 0:6246049069 is in state 'finished'
[2024-06-27 18:03:45] 2024-06-27 22:03:28,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,467 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-27 18:03:45] 2024-06-27 22:03:30,467 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6246049069/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,468 | INFO     | extracted standard info from prmon json
[2024-06-27 18:03:45] 2024-06-27 22:03:30,468 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 18:03:45] 2024-06-27 22:03:30,468 | WARNING  | GPU info not found in prmon json
[2024-06-27 18:03:45] 2024-06-27 22:03:30,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 18:03:45] 2024-06-27 22:03:30,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 18:03:45] 2024-06-27 22:03:30,479 | INFO     | fitting pss+swap vs Time
[2024-06-27 18:03:45] 2024-06-27 22:03:30,480 | INFO     | model: linear, x: [1719489034.0, 1719489095.0, 1719489156.0, 1719489217.0, 1719489278.0, 1719489339.0, 1719489400.0, 1719489461.0, 1719489522.0, 1719489583.0, 1719
[2024-06-27 18:03:45] 2024-06-27 22:03:30,480 | INFO     | sum of square deviations: 67987445214.799225
[2024-06-27 18:03:45] 2024-06-27 22:03:30,486 | INFO     | sum of deviations: 1110603222786.3489
[2024-06-27 18:03:45] 2024-06-27 22:03:30,486 | INFO     | mean x: 1719507395.0182421
[2024-06-27 18:03:45] 2024-06-27 22:03:30,486 | INFO     | mean y: 2439218.8772802656
[2024-06-27 18:03:45] 2024-06-27 22:03:30,486 | INFO     | -- intersect: -28086429960.994854
[2024-06-27 18:03:45] 2024-06-27 22:03:30,486 | INFO     | intersect: -28086429960.994854
[2024-06-27 18:03:45] 2024-06-27 22:03:30,487 | INFO     | chi2: 16.53318848027623
[2024-06-27 18:03:45] 2024-06-27 22:03:30,488 | INFO     | model: linear, x: [1719489034.0, 1719489095.0, 1719489156.0, 1719489217.0, 1719489278.0, 1719489339.0, 1719489400.0, 1719489461.0, 1719489522.0, 1719489583.0, 1719
[2024-06-27 18:03:45] 2024-06-27 22:03:30,488 | INFO     | sum of square deviations: 66310198517.29777
[2024-06-27 18:03:45] 2024-06-27 22:03:30,494 | INFO     | sum of deviations: 1140429042245.8667
[2024-06-27 18:03:45] 2024-06-27 22:03:30,494 | INFO     | mean x: 1719507242.5183947
[2024-06-27 18:03:45] 2024-06-27 22:03:30,494 | INFO     | mean y: 2441905.693979933
[2024-06-27 18:03:45] 2024-06-27 22:03:30,495 | INFO     | -- intersect: -29570324298.71636
[2024-06-27 18:03:45] 2024-06-27 22:03:30,495 | INFO     | intersect: -29570324298.71636
[2024-06-27 18:03:45] 2024-06-27 22:03:30,495 | INFO     | chi2: 15.787991357388895
[2024-06-27 18:03:45] 2024-06-27 22:03:30,495 | INFO     | current chi2=15.787991357388895 (change=4.507280152139683 %)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,495 | INFO     | right removable region: 597
[2024-06-27 18:03:45] 2024-06-27 22:03:30,496 | INFO     | model: linear, x: [1719489339.0, 1719489400.0, 1719489461.0, 1719489522.0, 1719489583.0, 1719489644.0, 1719489705.0, 1719489766.0, 1719489827.0, 1719489888.0, 1719
[2024-06-27 18:03:45] 2024-06-27 22:03:30,496 | INFO     | sum of square deviations: 66310191807.29777
[2024-06-27 18:03:45] 2024-06-27 22:03:30,503 | INFO     | sum of deviations: 924165680820.161
[2024-06-27 18:03:45] 2024-06-27 22:03:30,503 | INFO     | mean x: 1719507547.5183947
[2024-06-27 18:03:45] 2024-06-27 22:03:30,503 | INFO     | mean y: 2456160.1672240803
[2024-06-27 18:03:45] 2024-06-27 22:03:30,503 | INFO     | -- intersect: -23962334470.295906
[2024-06-27 18:03:45] 2024-06-27 22:03:30,504 | INFO     | intersect: -23962334470.295906
[2024-06-27 18:03:45] 2024-06-27 22:03:30,504 | INFO     | chi2: 12.665830129837921
[2024-06-27 18:03:45] 2024-06-27 22:03:30,504 | INFO     | current chi2=12.665830129837921 (change=23.391485284595838 %)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,504 | INFO     | left removable region: 10
[2024-06-27 18:03:45] 2024-06-27 22:03:30,505 | INFO     | model: linear, x: [1719489644.0, 1719489705.0, 1719489766.0, 1719489827.0, 1719489888.0, 1719489949.0, 1719490010.0, 1719490071.0, 1719490132.0, 1719490193.0, 1719
[2024-06-27 18:03:45] 2024-06-27 22:03:30,505 | INFO     | sum of square deviations: 62717821866.793884
[2024-06-27 18:03:45] 2024-06-27 22:03:30,511 | INFO     | sum of deviations: 811492600690.9843
[2024-06-27 18:03:45] 2024-06-27 22:03:30,511 | INFO     | mean x: 1719507517.0187395
[2024-06-27 18:03:45] 2024-06-27 22:03:30,511 | INFO     | mean y: 2472204.5468483814
[2024-06-27 18:03:45] 2024-06-27 22:03:30,511 | INFO     | -- intersect: -22245871015.293427
[2024-06-27 18:03:45] 2024-06-27 22:03:30,511 | INFO     | intersect: -22245871015.293427
[2024-06-27 18:03:45] 2024-06-27 22:03:30,512 | INFO     | chi2: 9.798469984866415
[2024-06-27 18:03:45] 2024-06-27 22:03:30,512 | INFO     | -- intersect: -22245871015.293427
[2024-06-27 18:03:45] 2024-06-27 22:03:30,512 | INFO     | current memory leak: 12.94 B/s (using 587 data points, chi2=9.80)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | ..............................
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . Timing measurements:
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . get job = 0 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . initial setup = 2 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . payload setup = 19 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . stage-in = 0 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . payload execution = 36775 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,513 | INFO     | . stage-out = 1 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,514 | INFO     | . log creation = 0 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,514 | INFO     | ..............................
[2024-06-27 18:03:45] 2024-06-27 22:03:30,979 | INFO     | 
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | job summary report
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | --------------------------------------------------
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | PanDA job id: 6246049069
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | task id: 38921013
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | errors: (none)
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 18:03:45] 2024-06-27 22:03:30,980 | INFO     | pilot state: finished 
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | transexitcode: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | exeerrorcode: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | exeerrordiag: 
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | exitcode: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | exitmsg: OK
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | cpuconsumptiontime: 139696 s
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | nevents: 400
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | neventsw: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | pid: 23341
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | pgrp: 23341
[2024-06-27 18:03:45] 2024-06-27 22:03:30,981 | INFO     | corecount: 8
[2024-06-27 18:03:45] 2024-06-27 22:03:30,982 | INFO     | event service: False
[2024-06-27 18:03:45] 2024-06-27 22:03:30,982 | INFO     | sizes: {0: 2387111, 1: 2387111, 10: 2387345, 12: 2387373, 36799: 2427407, 36800: 2427406, 36802: 2436550, 36806: 2436606, 36817: 2436776}
[2024-06-27 18:03:45] 2024-06-27 22:03:30,982 | INFO     | --------------------------------------------------
[2024-06-27 18:03:45] 2024-06-27 22:03:30,982 | INFO     | 
[2024-06-27 18:03:45] 2024-06-27 22:03:30,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-06-27 18:03:45] 2024-06-27 22:03:31,104 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | job 6246049069 has completed (purged errors)
[2024-06-27 18:03:45] 2024-06-27 22:03:31,107 | INFO     | overall cleanup function is called
[2024-06-27 18:03:45] 2024-06-27 22:03:32,115 | INFO     | --- collectZombieJob: --- 10, [23341]
[2024-06-27 18:03:45] 2024-06-27 22:03:32,115 | INFO     | zombie collector waiting for pid 23341
[2024-06-27 18:03:45] 2024-06-27 22:03:32,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 18:03:45] 2024-06-27 22:03:33,121 | INFO     | collected zombie processes
[2024-06-27 18:03:45] 2024-06-27 22:03:33,121 | INFO     | will now attempt to kill all subprocesses of pid=23341
[2024-06-27 18:03:45] 2024-06-27 22:03:33,282 | INFO     | process IDs to be killed: [23341] (in reverse order)
[2024-06-27 18:03:45] 2024-06-27 22:03:33,465 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 18:03:45] 2024-06-27 22:03:33,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 18:03:45] 2024-06-27 22:03:33,476 | INFO     | did not find any defunct processes belonging to 23341
[2024-06-27 18:03:45] 2024-06-27 22:03:33,486 | INFO     | did not find any defunct processes belonging to 23341
[2024-06-27 18:03:45] 2024-06-27 22:03:33,487 | INFO     | ready for new job
[2024-06-27 18:03:45] 2024-06-27 22:03:33,487 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 18:03:45] 2024-06-27 22:03:33,490 | INFO     | *************************************
[2024-06-27 18:03:45] 2024-06-27 22:03:33,490 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 18:03:45] 2024-06-27 22:03:33,490 | INFO     | *************************************
[2024-06-27 18:03:45] 2024-06-27 22:03:33,490 | INFO     | 
[2024-06-27 18:03:45] 2024-06-27 22:03:33,494 | INFO     | architecture information:
[2024-06-27 18:03:45] 2024-06-27 22:03:33,495 | INFO     | executing command: cat /etc/os-release
[2024-06-27 18:03:45] 2024-06-27 22:03:33,587 | INFO     | cat /etc/os-release:
[2024-06-27 18:03:45] NAME="CentOS Linux"
[2024-06-27 18:03:45] VERSION="7 (Core)"
[2024-06-27 18:03:45] ID="centos"
[2024-06-27 18:03:45] ID_LIKE="rhel fedora"
[2024-06-27 18:03:45] VERSION_ID="7"
[2024-06-27 18:03:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 18:03:45] ANSI_COLOR="0;31"
[2024-06-27 18:03:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 18:03:45] HOME_URL="https://www.centos.org/"
[2024-06-27 18:03:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 18:03:45] 
[2024-06-27 18:03:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 18:03:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 18:03:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 18:03:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 18:03:45] 
[2024-06-27 18:03:45] 2024-06-27 22:03:33,588 | INFO     | *************************************
[2024-06-27 18:03:45] 2024-06-27 22:03:34,095 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-06-27 18:03:45] 2024-06-27 22:03:34,122 | INFO     | sufficient remaining disk space (105954410496 B)
[2024-06-27 18:03:45] 2024-06-27 22:03:34,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 18:03:45] 2024-06-27 22:03:34,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 18:03:45] 2024-06-27 22:03:34,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 18:03:45] 2024-06-27 22:03:34,123 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 18:03:45] 2024-06-27 22:03:34,123 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 18:03:45] 2024-06-27 22:03:34,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 18:03:45] 2024-06-27 22:03:34,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 18:03:45] 2024-06-27 22:03:34,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 18:03:45] 2024-06-27 22:03:34,277 | INFO     | all data control threads have been joined
[2024-06-27 18:03:45] 2024-06-27 22:03:34,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 18:03:45] 2024-06-27 22:03:34,663 | INFO     | aborting loop
[2024-06-27 18:03:45] 2024-06-27 22:03:34,897 | INFO     | all job control threads have been joined
[2024-06-27 18:03:45] 2024-06-27 22:03:34,949 | INFO     | all payload control threads have been joined
[2024-06-27 18:03:45] 2024-06-27 22:03:35,128 | INFO     | [job] retrieve thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,283 | INFO     | [data] control thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 18:03:45] 2024-06-27 22:03:35,650 | INFO     | [job] validate thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,670 | INFO     | [job] job monitor thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,866 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,876 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,903 | INFO     | [job] control thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,953 | INFO     | [payload] control thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:35,970 | INFO     | [data] copytool_in thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,066 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,132 | INFO     | [data] copytool_out thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,135 | INFO     | [payload] failed_post thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,147 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,613 | INFO     | [job] queue monitor thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:36,671 | INFO     | [payload] validate_post thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:38,165 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 18:03:45] 2024-06-27 22:03:39,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659302270784)>', '<ExcThread(monitor, started 139658470074112)>']
[2024-06-27 18:03:45] 2024-06-27 22:03:40,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 18:03:45] 2024-06-27 22:03:40,162 | INFO     | [monitor] control thread has ended
[2024-06-27 18:03:45] 2024-06-27 22:03:44,331 | INFO     | all workflow threads have been joined
[2024-06-27 18:03:45] 2024-06-27 22:03:44,335 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 18:03:45] 2024-06-27 22:03:44,343 | INFO     | traces error code: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:44,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 18:03:45] 2024-06-27 22:03:44,959 [wrapper] ==== pilot stdout END ====
[2024-06-27 18:03:45] 2024-06-27 22:03:44,965 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 18:03:45] 2024-06-27 22:03:44,967 [wrapper] pilotpid: 5477
[2024-06-27 18:03:45] 2024-06-27 22:03:44,971 [wrapper] Pilot exit status: 0
[2024-06-27 18:03:45] 2024-06-27 22:03:44,991 [wrapper] pandaids: 6246049069
[2024-06-27 18:03:45] 2024-06-27 22:03:45,057 [wrapper] cleanup supervisor_pilot 46782 5478
[2024-06-27 18:03:45] 2024-06-27 22:03:45,059 [wrapper] Test setup, not cleaning
[2024-06-27 18:03:45] 2024-06-27 22:03:45,061 [wrapper] ==== wrapper stdout END ====
[2024-06-27 18:03:45] 2024-06-27 22:03:45,063 [wrapper] ==== wrapper stderr END ====
[2024-06-27 18:03:45] 2024-06-27 22:03:45,069 [wrapper] apfmon messages muted
[2024-06-27 18:03:45]  *** Error codes and diagnostics ***
[2024-06-27 18:03:45]     "exeErrorCode": 0,
[2024-06-27 18:03:45]     "exeErrorDiag": "",
[2024-06-27 18:03:45]     "pilotErrorCode": 0,
[2024-06-27 18:03:45]     "pilotErrorDiag": "",
[2024-06-27 18:03:45]  *** Listing of results directory ***
[2024-06-27 18:03:45] total 880344
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas    469766 Jun 27 07:25 pilot3.tar.gz
[2024-06-27 18:03:45] -rwx------ 1 boincer umatlas     32220 Jun 27 07:47 runpilot2-wrapper.sh
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas      5654 Jun 27 07:47 queuedata.json
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas       100 Jun 27 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 18:03:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun 27 07:48 run_atlas
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas       105 Jun 27 07:48 job.xml
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas 542251837 Jun 27 07:48 EVNT.38776210._000958.pool.root.1
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 07:48 start_atlas.sh
[2024-06-27 18:03:45] drwxrwx--x 2 boincer umatlas      4096 Jun 27 07:48 shared
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas    482521 Jun 27 07:48 input.tar.gz
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas         0 Jun 27 07:48 boinc_lockfile
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas      2647 Jun 27 07:48 pandaJob.out
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas       467 Jun 27 07:48 setup.sh.local
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas   1034827 Jun 27 07:49 agis_schedconf.cvmfs.json
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas   1321363 Jun 27 07:49 cric_ddmendpoints.json
[2024-06-27 18:03:45] drwx------ 4 boincer umatlas      4096 Jun 27 07:49 pilot3
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas      6389 Jun 27 18:00 init_data.xml
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas 347214952 Jun 27 18:02 HITS.38921013._055673.pool.root.1
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas       533 Jun 27 18:02 boinc_task_state.xml
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas        95 Jun 27 18:03 pilot_heartbeat.json
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas      1094 Jun 27 18:03 memory_monitor_summary.json
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas         0 Jun 27 18:03 agis_ddmendpoints.agis.ALL.json
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas    644288 Jun 27 18:03 log.38921013._055673.job.log.tgz.1
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas      7769 Jun 27 18:03 heartbeat.json
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas      4335 Jun 27 18:03 pilotlog.txt
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas   3582804 Jun 27 18:03 log.38921013._055673.job.log.1
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas      8192 Jun 27 18:03 boinc_mmap_file
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas       357 Jun 27 18:03 output.list
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas       620 Jun 27 18:03 runtime_log
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas   4249600 Jun 27 18:03 result.tar.gz
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas     11400 Jun 27 18:03 runtime_log.err
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas       653 Jun 27 18:03 kGnNDmVm2g5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmdCZKDmAKs5hn.diag
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas        29 Jun 27 18:03 wrapper_checkpoint.txt
[2024-06-27 18:03:45] -rw-r--r-- 1 boincer umatlas     21900 Jun 27 18:03 stderr.txt
[2024-06-27 18:03:45] HITS file was successfully produced:
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas 347214952 Jun 27 18:02 shared/HITS.pool.root.1
[2024-06-27 18:03:45]  *** Contents of shared directory: ***
[2024-06-27 18:03:45] total 873276
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas 542251837 Jun 27 07:48 ATLAS.root_0
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas     17537 Jun 27 07:48 start_atlas.sh
[2024-06-27 18:03:45] -rw-r--r-- 2 boincer umatlas    482521 Jun 27 07:48 input.tar.gz
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas 347214952 Jun 27 18:02 HITS.pool.root.1
[2024-06-27 18:03:45] -rw------- 1 boincer umatlas   4249600 Jun 27 18:03 result.tar.gz
18:03:47 (92711): run_atlas exited; CPU time 137425.432092
18:03:47 (92711): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN