Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:37:32 (3713404): wrapper (7.7.26015): starting
12:37:32 (3713404): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 12:37:32] Arguments: --nthreads 4
[2024-06-27 12:37:32] Threads: 4
[2024-06-27 12:37:32] Checking for CVMFS
[2024-06-27 12:37:32] No cvmfs_config command found, will try listing directly
[2024-06-27 12:37:32] CVMFS is ok
[2024-06-27 12:37:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 12:37:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 12:37:32] Further information can be found at the LHC@home message board.
[2024-06-27 12:37:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 12:37:32] Checking for apptainer binary...
[2024-06-27 12:37:32] which: no apptainer in ((null))
[2024-06-27 12:37:32] apptainer is not installed, using version from CVMFS
[2024-06-27 12:37:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 12:37:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-27 12:37:33] apptainer works
[2024-06-27 12:37:33] Set ATHENA_PROC_NUMBER=4
[2024-06-27 12:37:33] Set ATHENA_CORE_NUMBER=4
[2024-06-27 12:37:33] Starting ATLAS job with PandaID=6245848025
[2024-06-27 12:37:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:12:33 (3994541): wrapper (7.7.26015): starting
17:12:33 (3994541): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 17:12:33] Arguments: --nthreads 4
[2024-06-27 17:12:33] Threads: 4
[2024-06-27 17:12:33] This job has been restarted, cleaning up previous attempt
[2024-06-27 17:12:33] Checking for CVMFS
[2024-06-27 17:12:33] No cvmfs_config command found, will try listing directly
[2024-06-27 17:12:33] CVMFS is ok
[2024-06-27 17:12:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 17:12:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 17:12:33] Further information can be found at the LHC@home message board.
[2024-06-27 17:12:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 17:12:33] Checking for apptainer binary...
[2024-06-27 17:12:33] which: no apptainer in ((null))
[2024-06-27 17:12:33] apptainer is not installed, using version from CVMFS
[2024-06-27 17:12:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 17:12:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-06-27 17:12:33] apptainer works
[2024-06-27 17:12:33] Set ATHENA_PROC_NUMBER=4
[2024-06-27 17:12:33] Set ATHENA_CORE_NUMBER=4
[2024-06-27 17:12:33] Starting ATLAS job with PandaID=6245848025
[2024-06-27 17:12:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-28 03:09:33]  *** The last 200 lines of the pilot log: ***
[2024-06-28 03:09:33] 2024-06-28 01:09:17,381 | INFO     | -- intersect: -5900386611.356116
[2024-06-28 03:09:33] 2024-06-28 01:09:17,381 | INFO     | intersect: -5900386611.356116
[2024-06-28 03:09:33] 2024-06-28 01:09:17,381 | INFO     | chi2: 5.228731508754657
[2024-06-28 03:09:33] 2024-06-28 01:09:17,382 | INFO     | model: linear, x: [1719501187.0, 1719501248.0, 1719501309.0, 1719501370.0, 1719501431.0, 1719501492.0, 1719501553.0, 1719501614.0, 1719501675.0, 1719501736.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,382 | INFO     | sum of square deviations: 61128831725.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | sum of deviations: 251773855859.9999
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | mean x: 1719518907.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | mean y: 2373806.711340206
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | -- intersect: -7079880071.614491
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | intersect: -7079880071.614491
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | chi2: 4.44246528554421
[2024-06-28 03:09:33] 2024-06-28 01:09:17,387 | INFO     | current chi2=4.44246528554421 (change=15.0374181939534 %)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,388 | INFO     | right removable region: 581
[2024-06-28 03:09:33] 2024-06-28 01:09:17,388 | INFO     | model: linear, x: [1719501492.0, 1719501553.0, 1719501614.0, 1719501675.0, 1719501736.0, 1719501797.0, 1719501858.0, 1719501919.0, 1719501980.0, 1719502041.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,388 | INFO     | sum of square deviations: 61128831725.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,393 | INFO     | sum of deviations: 74757239933.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,393 | INFO     | mean x: 1719519212.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,393 | INFO     | mean y: 2383806.9604811
[2024-06-28 03:09:33] 2024-06-28 01:09:17,393 | INFO     | -- intersect: -2100494764.5843775
[2024-06-28 03:09:33] 2024-06-28 01:09:17,393 | INFO     | intersect: -2100494764.5843775
[2024-06-28 03:09:33] 2024-06-28 01:09:17,394 | INFO     | chi2: 2.8080042607542715
[2024-06-28 03:09:33] 2024-06-28 01:09:17,394 | INFO     | current chi2=2.8080042607542715 (change=46.29664468231488 %)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,394 | INFO     | model: linear, x: [1719501797.0, 1719501858.0, 1719501919.0, 1719501980.0, 1719502041.0, 1719502102.0, 1719502163.0, 1719502224.0, 1719502285.0, 1719502346.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,394 | INFO     | sum of square deviations: 59566839648.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | sum of deviations: -43359854568.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | mean x: 1719519365.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | mean y: 2395339.0225303294
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | -- intersect: 1254066739.3158486
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | intersect: 1254066739.3158486
[2024-06-28 03:09:33] 2024-06-28 01:09:17,399 | INFO     | chi2: 1.2188646732985782
[2024-06-28 03:09:33] 2024-06-28 01:09:17,400 | INFO     | current chi2=1.2188646732985782 (change=56.59320427914262 %)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,400 | INFO     | model: linear, x: [1719502102.0, 1719502163.0, 1719502224.0, 1719502285.0, 1719502346.0, 1719502407.0, 1719502468.0, 1719502529.0, 1719502590.0, 1719502651.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,400 | INFO     | sum of square deviations: 58031685283.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | sum of deviations: -86074306383.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | mean x: 1719519517.5
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | mean y: 2399566.9020979023
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | -- intersect: 2552841606.6096854
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | intersect: 2552841606.6096854
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | chi2: 0.8403567113215237
[2024-06-28 03:09:33] 2024-06-28 01:09:17,405 | INFO     | current chi2=0.8403567113215237 (change=31.05414163433824 %)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,406 | INFO     | model: linear, x: [1719502407.0, 1719502468.0, 1719502529.0, 1719502590.0, 1719502651.0, 1719502712.0, 1719502773.0, 1719502834.0, 1719502895.0, 1719502956.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,406 | INFO     | sum of square deviations: 56523136068.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | sum of deviations: -96039047576.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | mean x: 1719519670.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | mean y: 2400571.409171076
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | -- intersect: 2924054302.6587143
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | intersect: 2924054302.6587143
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | chi2: 0.8202213186936715
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | current chi2=0.8202213186936715 (change=2.3960530518269705 %)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,411 | INFO     | left removable region: 40
[2024-06-28 03:09:33] 2024-06-28 01:09:17,412 | INFO     | model: linear, x: [1719503627.0, 1719503688.0, 1719503749.0, 1719503810.0, 1719503871.0, 1719503932.0, 1719503993.0, 1719504054.0, 1719504115.0, 1719504176.0, 1719
[2024-06-28 03:09:33] 2024-06-28 01:09:17,412 | INFO     | sum of square deviations: 49098557790.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,416 | INFO     | sum of deviations: -64263057139.999985
[2024-06-28 03:09:33] 2024-06-28 01:09:17,416 | INFO     | mean x: 1719520097.0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,416 | INFO     | mean y: 2405125.887245841
[2024-06-28 03:09:33] 2024-06-28 01:09:17,416 | INFO     | -- intersect: 2253013355.960256
[2024-06-28 03:09:33] 2024-06-28 01:09:17,416 | INFO     | intersect: 2253013355.960256
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | chi2: 0.009412046289398748
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | -- intersect: 2253013355.960256
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | current memory leak: -1.31 B/s (using 541 data points, chi2=0.01)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | ..............................
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | . Timing measurements:
[2024-06-28 03:09:33] 2024-06-28 01:09:17,417 | INFO     | . get job = 0 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . initial setup = 1 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . payload setup = 5 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . stage-in = 0 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . payload execution = 35761 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . stage-out = 1 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | . log creation = 0 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,418 | INFO     | ..............................
[2024-06-28 03:09:33] 2024-06-28 01:09:17,474 | INFO     | 
[2024-06-28 03:09:33] 2024-06-28 01:09:17,474 | INFO     | job summary report
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | --------------------------------------------------
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | PanDA job id: 6245848025
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | task id: 38921007
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | errors: (none)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-28 03:09:33] 2024-06-28 01:09:17,475 | INFO     | pilot state: finished 
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | transexitcode: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | exeerrorcode: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | exeerrordiag: 
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | exitcode: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | exitmsg: OK
[2024-06-28 03:09:33] 2024-06-28 01:09:17,476 | INFO     | cpuconsumptiontime: 139455 s
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | nevents: 400
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | neventsw: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | pid: 4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | pgrp: 4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | corecount: 4
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | event service: False
[2024-06-28 03:09:33] 2024-06-28 01:09:17,477 | INFO     | sizes: {0: 2386161, 1: 2387096, 4: 2387302, 11: 2387330, 35770: 2428415, 35772: 2437397, 35774: 2437581, 35779: 2437751}
[2024-06-28 03:09:33] 2024-06-28 01:09:17,478 | INFO     | --------------------------------------------------
[2024-06-28 03:09:33] 2024-06-28 01:09:17,478 | INFO     | 
[2024-06-28 03:09:33] 2024-06-28 01:09:17,478 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-28 03:09:33] 2024-06-28 01:09:17,494 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,495 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,495 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,495 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-28 03:09:33] 2024-06-28 01:09:17,497 | INFO     | job 6245848025 has completed (purged errors)
[2024-06-28 03:09:33] 2024-06-28 01:09:17,498 | INFO     | overall cleanup function is called
[2024-06-28 03:09:33] 2024-06-28 01:09:18,505 | INFO     | --- collectZombieJob: --- 10, [4005383]
[2024-06-28 03:09:33] 2024-06-28 01:09:18,505 | INFO     | zombie collector waiting for pid 4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:18,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-28 03:09:33] 2024-06-28 01:09:19,511 | INFO     | collected zombie processes
[2024-06-28 03:09:33] 2024-06-28 01:09:19,511 | INFO     | will now attempt to kill all subprocesses of pid=4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:19,613 | INFO     | process IDs to be killed: [4005383] (in reverse order)
[2024-06-28 03:09:33] 2024-06-28 01:09:19,678 | WARNING  | found no corresponding commands to process id(s)
[2024-06-28 03:09:33] 2024-06-28 01:09:19,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-28 03:09:33] 2024-06-28 01:09:19,682 | INFO     | did not find any defunct processes belonging to 4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:19,684 | INFO     | did not find any defunct processes belonging to 4005383
[2024-06-28 03:09:33] 2024-06-28 01:09:19,685 | INFO     | ready for new job
[2024-06-28 03:09:33] 2024-06-28 01:09:19,685 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-28 03:09:33] 2024-06-28 01:09:19,687 | INFO     | *************************************
[2024-06-28 03:09:33] 2024-06-28 01:09:19,687 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-28 03:09:33] 2024-06-28 01:09:19,688 | INFO     | *************************************
[2024-06-28 03:09:33] 2024-06-28 01:09:19,688 | INFO     | 
[2024-06-28 03:09:33] 2024-06-28 01:09:19,689 | INFO     | architecture information:
[2024-06-28 03:09:33] 2024-06-28 01:09:19,689 | INFO     | executing command: cat /etc/os-release
[2024-06-28 03:09:33] 2024-06-28 01:09:19,702 | INFO     | cat /etc/os-release:
[2024-06-28 03:09:33] NAME="CentOS Linux"
[2024-06-28 03:09:33] VERSION="7 (Core)"
[2024-06-28 03:09:33] ID="centos"
[2024-06-28 03:09:33] ID_LIKE="rhel fedora"
[2024-06-28 03:09:33] VERSION_ID="7"
[2024-06-28 03:09:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-28 03:09:33] ANSI_COLOR="0;31"
[2024-06-28 03:09:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-28 03:09:33] HOME_URL="https://www.centos.org/"
[2024-06-28 03:09:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-28 03:09:33] 
[2024-06-28 03:09:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-28 03:09:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-28 03:09:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-28 03:09:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-28 03:09:33] 
[2024-06-28 03:09:33] 2024-06-28 01:09:19,702 | INFO     | *************************************
[2024-06-28 03:09:33] 2024-06-28 01:09:20,204 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-28 03:09:33] 2024-06-28 01:09:20,222 | INFO     | sufficient remaining disk space (1686088187904 B)
[2024-06-28 03:09:33] 2024-06-28 01:09:20,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-28 03:09:33] 2024-06-28 01:09:20,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-28 03:09:33] 2024-06-28 01:09:20,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-28 03:09:33] 2024-06-28 01:09:20,830 | INFO     | aborting loop
[2024-06-28 03:09:33] 2024-06-28 01:09:20,902 | INFO     | all job control threads have been joined
[2024-06-28 03:09:33] 2024-06-28 01:09:21,001 | INFO     | all payload control threads have been joined
[2024-06-28 03:09:33] 2024-06-28 01:09:21,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-28 03:09:33] 2024-06-28 01:09:21,161 | INFO     | all data control threads have been joined
[2024-06-28 03:09:33] 2024-06-28 01:09:21,173 | INFO     | found 0 job(s) in 20 queues
[2024-06-28 03:09:33] 2024-06-28 01:09:21,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-28 03:09:33] 2024-06-28 01:09:21,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-28 03:09:33] 2024-06-28 01:09:21,227 | INFO     | [job] retrieve thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,234 | INFO     | [job] validate thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,251 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,377 | INFO     | [payload] validate_post thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,485 | INFO     | [job] create_data_payload thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,835 | INFO     | [job] job monitor thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,907 | INFO     | [job] control thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:21,920 | INFO     | [payload] failed_post thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:22,007 | INFO     | [payload] control thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:22,128 | INFO     | [payload] execute_payloads thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:22,168 | INFO     | [data] control thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:22,479 | INFO     | [payload] validate_pre thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:22,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-28 03:09:33] 2024-06-28 01:09:22,581 | INFO     | [data] copytool_in thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:23,025 | INFO     | [data] copytool_out thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:23,078 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-28 03:09:33] 2024-06-28 01:09:23,484 | INFO     | [job] queue monitor thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:27,083 | INFO     | [data] queue_monitor thread has finished
[2024-06-28 03:09:33] 2024-06-28 01:09:27,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47061699109952)>', '<ExcThread(monitor, started 47061883074304)>']
[2024-06-28 03:09:33] 2024-06-28 01:09:28,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-28 03:09:33] 2024-06-28 01:09:28,208 | INFO     | [monitor] control thread has ended
[2024-06-28 03:09:33] 2024-06-28 01:09:32,458 | INFO     | all workflow threads have been joined
[2024-06-28 03:09:33] 2024-06-28 01:09:32,458 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-28 03:09:33] 2024-06-28 01:09:32,459 | INFO     | traces error code: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:32,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-28 03:09:33] 2024-06-28 01:09:32,553 [wrapper] ==== pilot stdout END ====
[2024-06-28 03:09:33] 2024-06-28 01:09:32,555 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-28 03:09:33] 2024-06-28 01:09:32,557 [wrapper] pilotpid: 3998532
[2024-06-28 03:09:33] 2024-06-28 01:09:32,559 [wrapper] Pilot exit status: 0
[2024-06-28 03:09:33] 2024-06-28 01:09:32,566 [wrapper] pandaids: 6245848025 6245848025
[2024-06-28 03:09:33] 2024-06-28 01:09:32,610 [wrapper] cleanup supervisor_pilot  701121 3998533
[2024-06-28 03:09:33] 2024-06-28 01:09:32,612 [wrapper] Test setup, not cleaning
[2024-06-28 03:09:33] 2024-06-28 01:09:32,614 [wrapper] ==== wrapper stdout END ====
[2024-06-28 03:09:33] 2024-06-28 01:09:32,615 [wrapper] ==== wrapper stderr END ====
[2024-06-28 03:09:33] 2024-06-28 01:09:32,619 [wrapper] apfmon messages muted
[2024-06-28 03:09:33]  *** Error codes and diagnostics ***
[2024-06-28 03:09:33]     "exeErrorCode": 0,
[2024-06-28 03:09:33]     "exeErrorDiag": "",
[2024-06-28 03:09:33]     "pilotErrorCode": 0,
[2024-06-28 03:09:33]     "pilotErrorDiag": "",
[2024-06-28 03:09:33]  *** Listing of results directory ***
[2024-06-28 03:09:33] total 1503844
[2024-06-28 03:09:33] drwx------ 4 boinc boinc      4096 Jun 12 12:00 pilot3
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc    469766 Jun 27 08:42 pilot3.tar.gz
[2024-06-28 03:09:33] -rwx------ 1 boinc boinc     32220 Jun 27 08:50 runpilot2-wrapper.sh
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc      5654 Jun 27 08:50 queuedata.json
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc       100 Jun 27 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-28 03:09:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 12:37 run_atlas
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc       105 Jun 27 12:37 job.xml
[2024-06-28 03:09:33] -rw-r--r-- 3 boinc boinc 585431749 Jun 27 12:37 EVNT.38776201._000501.pool.root.1
[2024-06-28 03:09:33] -rw-r--r-- 3 boinc boinc 585431749 Jun 27 12:37 ATLAS.root_0
[2024-06-28 03:09:33] -rw-r--r-- 2 boinc boinc     17537 Jun 27 12:37 start_atlas.sh
[2024-06-28 03:09:33] drwxrwx--x 2 boinc boinc      4096 Jun 27 12:37 shared
[2024-06-28 03:09:33] -rw-r--r-- 2 boinc boinc    482516 Jun 27 12:37 input.tar.gz
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc         0 Jun 27 12:37 boinc_lockfile
[2024-06-28 03:09:33] -rw------- 1 boinc boinc   1321363 Jun 27 12:37 cric_ddmendpoints.json
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc      2630 Jun 27 17:12 pandaJob.out
[2024-06-28 03:09:33] -rw------- 1 boinc boinc       424 Jun 27 17:12 setup.sh.local
[2024-06-28 03:09:33] -rw------- 1 boinc boinc   1034827 Jun 27 17:12 agis_schedconf.cvmfs.json
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc      6466 Jun 27 20:47 init_data.xml
[2024-06-28 03:09:33] -rw------- 1 boinc boinc 355380677 Jun 28 03:08 HITS.38921007._055356.pool.root.1
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc       532 Jun 28 03:08 boinc_task_state.xml
[2024-06-28 03:09:33] -rw------- 1 boinc boinc      1045 Jun 28 03:09 memory_monitor_summary.json
[2024-06-28 03:09:33] -rw------- 1 boinc boinc         0 Jun 28 03:09 agis_ddmendpoints.agis.ALL.json
[2024-06-28 03:09:33] -rw------- 1 boinc boinc    574395 Jun 28 03:09 log.38921007._055356.job.log.tgz.1
[2024-06-28 03:09:33] -rw------- 1 boinc boinc        96 Jun 28 03:09 pilot_heartbeat.json
[2024-06-28 03:09:33] -rw------- 1 boinc boinc      7769 Jun 28 03:09 heartbeat.json
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc      8192 Jun 28 03:09 boinc_mmap_file
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc        29 Jun 28 03:09 wrapper_checkpoint.txt
[2024-06-28 03:09:33] -rw------- 1 boinc boinc      4222 Jun 28 03:09 pilotlog.txt
[2024-06-28 03:09:33] -rw------- 1 boinc boinc   4494999 Jun 28 03:09 log.38921007._055356.job.log.1
[2024-06-28 03:09:33] -rw------- 1 boinc boinc       357 Jun 28 03:09 output.list
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc       620 Jun 28 03:09 runtime_log
[2024-06-28 03:09:33] -rw------- 1 boinc boinc   5089280 Jun 28 03:09 result.tar.gz
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc     11487 Jun 28 03:09 runtime_log.err
[2024-06-28 03:09:33] -rw------- 1 boinc boinc       773 Jun 28 03:09 OQlNDmx8xg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmcloKDmUllGzn.diag
[2024-06-28 03:09:33] -rw-r--r-- 1 boinc boinc     23198 Jun 28 03:09 stderr.txt
[2024-06-28 03:09:33] HITS file was successfully produced:
[2024-06-28 03:09:33] -rw------- 1 boinc boinc 355380677 Jun 28 03:08 shared/HITS.pool.root.1
[2024-06-28 03:09:33]  *** Contents of shared directory: ***
[2024-06-28 03:09:33] total 924236
[2024-06-28 03:09:33] -rw-r--r-- 3 boinc boinc 585431749 Jun 27 12:37 ATLAS.root_0
[2024-06-28 03:09:33] -rw-r--r-- 2 boinc boinc     17537 Jun 27 12:37 start_atlas.sh
[2024-06-28 03:09:33] -rw-r--r-- 2 boinc boinc    482516 Jun 27 12:37 input.tar.gz
[2024-06-28 03:09:33] -rw------- 1 boinc boinc 355380677 Jun 28 03:08 HITS.pool.root.1
[2024-06-28 03:09:33] -rw------- 1 boinc boinc   5089280 Jun 28 03:09 result.tar.gz
03:09:34 (3994541): run_atlas exited; CPU time 139148.032926
03:09:34 (3994541): called boinc_finish(0)

</stderr_txt>
]]>

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