Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:20:55 (56851): wrapper (7.7.26015): starting
19:20:55 (56851): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 19:20:55] Arguments: --nthreads 8
[2024-06-26 19:20:55] Threads: 8
[2024-06-26 19:20:55] Checking for CVMFS
[2024-06-26 19:20:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 19:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 19:20:56] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 19:20:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 19:20:57] 2.11.2.0 47030 1517 167704 134335 0 216 15363852 18432001 21821 130560 0 12835855 99.242 18568289 55118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 19:20:57] CVMFS is ok
[2024-06-26 19:20:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 19:20:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 19:20:57] Further information can be found at the LHC@home message board.
[2024-06-26 19:20:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 19:20:57] Checking for apptainer binary...
[2024-06-26 19:20:57] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 19:20:57] Running /usr/bin/apptainer --version
[2024-06-26 19:20:57] apptainer version 1.3.2-1.el7
[2024-06-26 19:20:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 19:21:00] c-210-40.aglt2.org
[2024-06-26 19:21:00] apptainer works
[2024-06-26 19:21:00] Set ATHENA_PROC_NUMBER=8
[2024-06-26 19:21:00] Set ATHENA_CORE_NUMBER=8
[2024-06-26 19:21:01] Starting ATLAS job with PandaID=6245571438
[2024-06-26 19:21:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 22:21:22]  *** The last 200 lines of the pilot log: ***
[2024-06-26 22:21:22] 2024-06-27 02:21:00,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 22:21:22] 2024-06-27 02:21:02,702 | INFO     | monitor loop #800: job 0:6245571438 is in state 'finished'
[2024-06-26 22:21:22] 2024-06-27 02:21:02,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,432 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 22:21:22] 2024-06-27 02:21:03,432 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6245571438/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,433 | INFO     | extracted standard info from prmon json
[2024-06-26 22:21:22] 2024-06-27 02:21:03,433 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 22:21:22] 2024-06-27 02:21:03,433 | WARNING  | GPU info not found in prmon json
[2024-06-26 22:21:22] 2024-06-27 02:21:03,433 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 22:21:22] 2024-06-27 02:21:03,434 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 22:21:22] 2024-06-27 02:21:03,443 | INFO     | fitting pss+swap vs Time
[2024-06-26 22:21:22] 2024-06-27 02:21:03,443 | INFO     | model: linear, x: [1719444402.0, 1719444463.0, 1719444524.0, 1719444585.0, 1719444646.0, 1719444707.0, 1719444768.0, 1719444829.0, 1719444890.0, 1719444951.0, 1719
[2024-06-26 22:21:22] 2024-06-27 02:21:03,443 | INFO     | sum of square deviations: 1550427367.7894788
[2024-06-26 22:21:22] 2024-06-27 02:21:03,444 | INFO     | sum of deviations: 266518441829.93
[2024-06-26 22:21:22] 2024-06-27 02:21:03,444 | INFO     | mean x: 1719449587.0350878
[2024-06-26 22:21:22] 2024-06-27 02:21:03,444 | INFO     | mean y: 2097113.678362573
[2024-06-26 22:21:22] 2024-06-27 02:21:03,444 | INFO     | -- intersect: -295571261730.65076
[2024-06-26 22:21:22] 2024-06-27 02:21:03,444 | INFO     | intersect: -295571261730.65076
[2024-06-26 22:21:22] 2024-06-27 02:21:03,445 | INFO     | chi2: 13.610395316156433
[2024-06-26 22:21:22] 2024-06-27 02:21:03,445 | INFO     | model: linear, x: [1719444402.0, 1719444463.0, 1719444524.0, 1719444585.0, 1719444646.0, 1719444707.0, 1719444768.0, 1719444829.0, 1719444890.0, 1719444951.0, 1719
[2024-06-26 22:21:22] 2024-06-27 02:21:03,445 | INFO     | sum of square deviations: 1418361605.283133
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | sum of deviations: 267391032305.0604
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | mean x: 1719449434.5361445
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | mean y: 2097806.1566265062
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | -- intersect: -324150331013.4276
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | intersect: -324150331013.4276
[2024-06-26 22:21:22] 2024-06-27 02:21:03,446 | INFO     | chi2: 12.277262743066089
[2024-06-26 22:21:22] 2024-06-27 02:21:03,454 | INFO     | current chi2=12.277262743066089 (change=9.794958501373051 %)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,454 | INFO     | right removable region: 165
[2024-06-26 22:21:22] 2024-06-27 02:21:03,455 | INFO     | model: linear, x: [1719444707.0, 1719444768.0, 1719444829.0, 1719444890.0, 1719444951.0, 1719445012.0, 1719445073.0, 1719445134.0, 1719445195.0, 1719445256.0, 1719
[2024-06-26 22:21:22] 2024-06-27 02:21:03,455 | INFO     | sum of square deviations: 1418357945.283133
[2024-06-26 22:21:22] 2024-06-27 02:21:03,455 | INFO     | sum of deviations: 217620698506.88553
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | mean x: 1719449739.5361445
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | mean y: 2153529.1024096385
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | -- intersect: -263815491804.87753
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | intersect: -263815491804.87753
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | chi2: 10.009426580973317
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | current chi2=10.009426580973317 (change=26.45748820321574 %)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | model: linear, x: [1719445012.0, 1719445073.0, 1719445134.0, 1719445195.0, 1719445256.0, 1719445317.0, 1719445378.0, 1719445439.0, 1719445500.0, 1719445561.0, 1719
[2024-06-26 22:21:22] 2024-06-27 02:21:03,456 | INFO     | sum of square deviations: 1294009597.7763932
[2024-06-26 22:21:22] 2024-06-27 02:21:03,457 | INFO     | sum of deviations: 183220311802.37888
[2024-06-26 22:21:22] 2024-06-27 02:21:03,457 | INFO     | mean x: 1719449892.037267
[2024-06-26 22:21:22] 2024-06-27 02:21:03,457 | INFO     | mean y: 2195691.7701863353
[2024-06-26 22:21:22] 2024-06-27 02:21:03,457 | INFO     | -- intersect: -243456698190.46347
[2024-06-26 22:21:22] 2024-06-27 02:21:03,457 | INFO     | intersect: -243456698190.46347
[2024-06-26 22:21:22] 2024-06-27 02:21:03,458 | INFO     | chi2: 8.915435114632073
[2024-06-26 22:21:22] 2024-06-27 02:21:03,458 | INFO     | current chi2=8.915435114632073 (change=10.92961177637075 %)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,458 | INFO     | left removable region: 20
[2024-06-26 22:21:22] 2024-06-27 02:21:03,458 | INFO     | model: linear, x: [1719445622.0, 1719445683.0, 1719445744.0, 1719445805.0, 1719445866.0, 1719445927.0, 1719445988.0, 1719446049.0, 1719446110.0, 1719446171.0, 1719
[2024-06-26 22:21:22] 2024-06-27 02:21:03,458 | INFO     | sum of square deviations: 945276013.751725
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | sum of deviations: 126553180274.95166
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | mean x: 1719450014.0413792
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | mean y: 2282497.8413793105
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | -- intersect: -230197007905.28903
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | intersect: -230197007905.28903
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | chi2: 6.0112582922426885
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | -- intersect: -230197007905.28903
[2024-06-26 22:21:22] 2024-06-27 02:21:03,467 | INFO     | current memory leak: 133.88 B/s (using 145 data points, chi2=6.01)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | ..............................
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . Timing measurements:
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . get job = 0 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . initial setup = 4 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . payload setup = 66 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . stage-in = 0 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . payload execution = 10477 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . stage-out = 3 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | . log creation = 1 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,468 | INFO     | ..............................
[2024-06-26 22:21:22] 2024-06-27 02:21:03,617 | INFO     | 
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | job summary report
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | --------------------------------------------------
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | PanDA job id: 6245571438
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | task id: 40092568
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | errors: (none)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | pilot state: finished 
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | transexitcode: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | exeerrorcode: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | exeerrordiag: 
[2024-06-26 22:21:22] 2024-06-27 02:21:03,618 | INFO     | exitcode: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | exitmsg: OK
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | cpuconsumptiontime: 29654 s
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | nevents: 400
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | neventsw: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | pid: 30876
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | pgrp: 30876
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | corecount: 8
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | event service: False
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | sizes: {0: 2386889, 1: 2387088, 12: 2387088, 22: 2387116, 33: 2387144, 44: 2387172, 48: 2387534, 55: 2387562, 10548: 2416049, 10553: 2425065, 10608: 2425179}
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | --------------------------------------------------
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | 
[2024-06-26 22:21:22] 2024-06-27 02:21:03,619 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2024-06-26 22:21:22] 2024-06-27 02:21:03,892 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,893 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | job 6245571438 has completed (purged errors)
[2024-06-26 22:21:22] 2024-06-27 02:21:03,894 | INFO     | overall cleanup function is called
[2024-06-26 22:21:22] 2024-06-27 02:21:04,906 | INFO     | --- collectZombieJob: --- 10, [30876]
[2024-06-26 22:21:22] 2024-06-27 02:21:04,907 | INFO     | zombie collector waiting for pid 30876
[2024-06-26 22:21:22] 2024-06-27 02:21:04,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 22:21:22] 2024-06-27 02:21:05,912 | INFO     | collected zombie processes
[2024-06-26 22:21:22] 2024-06-27 02:21:05,913 | INFO     | will now attempt to kill all subprocesses of pid=30876
[2024-06-26 22:21:22] 2024-06-27 02:21:06,419 | INFO     | process IDs to be killed: [30876] (in reverse order)
[2024-06-26 22:21:22] 2024-06-27 02:21:06,590 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 22:21:22] 2024-06-27 02:21:06,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 22:21:22] 2024-06-27 02:21:06,598 | INFO     | did not find any defunct processes belonging to 30876
[2024-06-26 22:21:22] 2024-06-27 02:21:06,605 | INFO     | did not find any defunct processes belonging to 30876
[2024-06-26 22:21:22] 2024-06-27 02:21:06,606 | INFO     | ready for new job
[2024-06-26 22:21:22] 2024-06-27 02:21:06,606 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 22:21:22] 2024-06-27 02:21:06,607 | INFO     | *************************************
[2024-06-26 22:21:22] 2024-06-27 02:21:06,607 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 22:21:22] 2024-06-27 02:21:06,607 | INFO     | *************************************
[2024-06-26 22:21:22] 2024-06-27 02:21:06,607 | INFO     | 
[2024-06-26 22:21:22] 2024-06-27 02:21:06,610 | INFO     | architecture information:
[2024-06-26 22:21:22] 2024-06-27 02:21:06,611 | INFO     | executing command: cat /etc/os-release
[2024-06-26 22:21:22] 2024-06-27 02:21:06,842 | INFO     | cat /etc/os-release:
[2024-06-26 22:21:22] NAME="CentOS Linux"
[2024-06-26 22:21:22] VERSION="7 (Core)"
[2024-06-26 22:21:22] ID="centos"
[2024-06-26 22:21:22] ID_LIKE="rhel fedora"
[2024-06-26 22:21:22] VERSION_ID="7"
[2024-06-26 22:21:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 22:21:22] ANSI_COLOR="0;31"
[2024-06-26 22:21:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 22:21:22] HOME_URL="https://www.centos.org/"
[2024-06-26 22:21:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 22:21:22] 
[2024-06-26 22:21:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 22:21:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 22:21:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 22:21:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 22:21:22] 
[2024-06-26 22:21:22] 2024-06-27 02:21:06,842 | INFO     | *************************************
[2024-06-26 22:21:22] 2024-06-27 02:21:07,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2024-06-26 22:21:22] 2024-06-27 02:21:07,467 | INFO     | sufficient remaining disk space (72941043712 B)
[2024-06-26 22:21:22] 2024-06-27 02:21:07,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 22:21:22] 2024-06-27 02:21:07,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 22:21:22] 2024-06-27 02:21:07,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 22:21:22] 2024-06-27 02:21:07,721 | INFO     | all data control threads have been joined
[2024-06-26 22:21:22] 2024-06-27 02:21:07,734 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-06-26 22:21:22] 2024-06-27 02:21:07,735 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-06-26 22:21:22] 2024-06-27 02:21:07,735 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:21:22] 2024-06-27 02:21:07,735 | INFO     | will abort loop
[2024-06-26 22:21:22] 2024-06-27 02:21:07,878 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 22:21:22] 2024-06-27 02:21:07,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 22:21:22] 2024-06-27 02:21:07,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 22:21:22] 2024-06-27 02:21:08,205 | INFO     | all payload control threads have been joined
[2024-06-26 22:21:22] 2024-06-27 02:21:08,331 | INFO     | all job control threads have been joined
[2024-06-26 22:21:22] 2024-06-27 02:21:08,472 | INFO     | [job] retrieve thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:08,585 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:08,593 | INFO     | [data] copytool_in thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:08,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:21:22] 2024-06-27 02:21:08,727 | INFO     | [data] control thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:08,740 | INFO     | [job] job monitor thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:08,954 | INFO     | [payload] failed_post thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 22:21:22] 2024-06-27 02:21:09,211 | INFO     | [payload] control thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,337 | INFO     | [job] control thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,478 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,482 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,486 | INFO     | [data] copytool_out thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,526 | INFO     | [job] validate thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,601 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,666 | INFO     | [job] queue monitor thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:09,869 | INFO     | [payload] validate_post thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:13,082 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 22:21:22] 2024-06-27 02:21:14,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647134132032)>', '<ExcThread(monitor, started 140646622951168)>']
[2024-06-26 22:21:22] 2024-06-27 02:21:14,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 22:21:22] 2024-06-27 02:21:14,919 | INFO     | [monitor] control thread has ended
[2024-06-26 22:21:22] 2024-06-27 02:21:19,685 | INFO     | all workflow threads have been joined
[2024-06-26 22:21:22] 2024-06-27 02:21:19,686 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 22:21:22] 2024-06-27 02:21:19,686 | INFO     | traces error code: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:19,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 22:21:22] 2024-06-27 02:21:20,021 [wrapper] ==== pilot stdout END ====
[2024-06-26 22:21:22] 2024-06-27 02:21:20,037 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 22:21:22] 2024-06-27 02:21:20,050 [wrapper] pilotpid: 22261
[2024-06-26 22:21:22] 2024-06-27 02:21:20,056 [wrapper] Pilot exit status: 0
[2024-06-26 22:21:22] 2024-06-27 02:21:20,194 [wrapper] pandaids: 6245571438
[2024-06-26 22:21:22] 2024-06-27 02:21:20,282 [wrapper] cleanup supervisor_pilot 45224 22262
[2024-06-26 22:21:22] 2024-06-27 02:21:20,320 [wrapper] Test setup, not cleaning
[2024-06-26 22:21:22] 2024-06-27 02:21:20,340 [wrapper] ==== wrapper stdout END ====
[2024-06-26 22:21:22] 2024-06-27 02:21:20,345 [wrapper] ==== wrapper stderr END ====
[2024-06-26 22:21:22] 2024-06-27 02:21:20,451 [wrapper] apfmon messages muted
[2024-06-26 22:21:22]  *** Error codes and diagnostics ***
[2024-06-26 22:21:22]     "exeErrorCode": 0,
[2024-06-26 22:21:22]     "exeErrorDiag": "",
[2024-06-26 22:21:22]     "pilotErrorCode": 0,
[2024-06-26 22:21:22]     "pilotErrorDiag": "",
[2024-06-26 22:21:22]  *** Listing of results directory ***
[2024-06-26 22:21:22] total 669908
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 18:53 pilot3.tar.gz
[2024-06-26 22:21:22] -rwx------ 1 boincer umatlas     32220 Jun 26 19:18 runpilot2-wrapper.sh
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 19:18 queuedata.json
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas       100 Jun 26 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 22:21:22] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 19:20 run_atlas
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas       105 Jun 26 19:20 job.xml
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas 498239130 Jun 26 19:20 EVNT.40092566._000004.pool.root.1
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 19:20 start_atlas.sh
[2024-06-26 22:21:22] drwxrwx--x 2 boincer umatlas      4096 Jun 26 19:20 shared
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas    482517 Jun 26 19:20 input.tar.gz
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas         0 Jun 26 19:20 boinc_lockfile
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas      2636 Jun 26 19:21 pandaJob.out
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas       467 Jun 26 19:21 setup.sh.local
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas   1034703 Jun 26 19:22 agis_schedconf.cvmfs.json
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas         0 Jun 26 19:22 agis_ddmendpoints.agis.ALL.json
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas   1321363 Jun 26 19:22 cric_ddmendpoints.json
[2024-06-26 22:21:22] drwx------ 4 boincer umatlas      4096 Jun 26 19:22 pilot3
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas      6340 Jun 26 22:10 init_data.xml
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas 181656886 Jun 26 22:18 HITS.40092568._000138.pool.root.1
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas       532 Jun 26 22:19 boinc_task_state.xml
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas      1080 Jun 26 22:20 memory_monitor_summary.json
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas    349878 Jun 26 22:20 log.40092568._000138.job.log.tgz.1
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas        95 Jun 26 22:20 pilot_heartbeat.json
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas      7747 Jun 26 22:21 heartbeat.json
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas      4397 Jun 26 22:21 pilotlog.txt
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 22:21 boinc_mmap_file
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas        28 Jun 26 22:21 wrapper_checkpoint.txt
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas    925205 Jun 26 22:21 log.40092568._000138.job.log.1
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas       357 Jun 26 22:21 output.list
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas       620 Jun 26 22:21 runtime_log
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas   1290240 Jun 26 22:21 result.tar.gz
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas     11405 Jun 26 22:21 runtime_log.err
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas       651 Jun 26 22:21 rp7MDmp5qg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm1joKDmO1lxWo.diag
[2024-06-26 22:21:22] -rw-r--r-- 1 boincer umatlas     21710 Jun 26 22:21 stderr.txt
[2024-06-26 22:21:22] HITS file was successfully produced:
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas 181656886 Jun 26 22:18 shared/HITS.pool.root.1
[2024-06-26 22:21:22]  *** Contents of shared directory: ***
[2024-06-26 22:21:22] total 665724
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas 498239130 Jun 26 19:20 ATLAS.root_0
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 19:20 start_atlas.sh
[2024-06-26 22:21:22] -rw-r--r-- 2 boincer umatlas    482517 Jun 26 19:20 input.tar.gz
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas 181656886 Jun 26 22:18 HITS.pool.root.1
[2024-06-26 22:21:22] -rw------- 1 boincer umatlas   1290240 Jun 26 22:21 result.tar.gz
22:21:23 (56851): run_atlas exited; CPU time 28788.311918
22:21:23 (56851): called boinc_finish(0)

</stderr_txt>
]]>

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