Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:20:15 (46670): wrapper (7.7.26015): starting
19:20:15 (46670): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 19:20:15] Arguments: --nthreads 8
[2024-06-26 19:20:15] Threads: 8
[2024-06-26 19:20:15] Checking for CVMFS
[2024-06-26 19:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 19:20:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 19:20:16] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 19:20:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 19:20:17] 2.11.2.0 47030 1516 166644 134335 0 216 15277865 18432001 21764 130560 0 12822198 99.252 18529858 55120 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 19:20:17] CVMFS is ok
[2024-06-26 19:20:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 19:20:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 19:20:17] Further information can be found at the LHC@home message board.
[2024-06-26 19:20:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 19:20:17] Checking for apptainer binary...
[2024-06-26 19:20:17] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 19:20:17] Running /usr/bin/apptainer --version
[2024-06-26 19:20:17] apptainer version 1.3.2-1.el7
[2024-06-26 19:20:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 19:20:31] c-210-40.aglt2.org
[2024-06-26 19:20:31] apptainer works
[2024-06-26 19:20:31] Set ATHENA_PROC_NUMBER=8
[2024-06-26 19:20:31] Set ATHENA_CORE_NUMBER=8
[2024-06-26 19:20:31] Starting ATLAS job with PandaID=6245571442
[2024-06-26 19:20:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 22:24:59]  *** The last 200 lines of the pilot log: ***
[2024-06-26 22:24:59] 2024-06-27 02:24:12,141 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-26 22:24:59] 2024-06-27 02:24:12,141 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-26 22:24:59] 2024-06-27 02:24:12,373 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-26 22:24:59] 2024-06-27 02:24:43,098 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 22:24:59] 2024-06-27 02:24:43,098 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6245571442/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,099 | INFO     | extracted standard info from prmon json
[2024-06-26 22:24:59] 2024-06-27 02:24:43,099 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 22:24:59] 2024-06-27 02:24:43,099 | WARNING  | GPU info not found in prmon json
[2024-06-26 22:24:59] 2024-06-27 02:24:43,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 22:24:59] 2024-06-27 02:24:43,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 22:24:59] 2024-06-27 02:24:43,104 | INFO     | fitting pss+swap vs Time
[2024-06-26 22:24:59] 2024-06-27 02:24:43,105 | INFO     | model: linear, x: [1719444397.0, 1719444458.0, 1719444519.0, 1719444580.0, 1719444641.0, 1719444702.0, 1719444763.0, 1719444824.0, 1719444885.0, 1719444946.0, 1719
[2024-06-26 22:24:59] 2024-06-27 02:24:43,105 | INFO     | sum of square deviations: 1661801288.8571463
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | sum of deviations: 289524196074.4285
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | mean x: 1719449704.0285714
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | mean y: 2116623.714285714
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | -- intersect: -299565765882.65234
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | intersect: -299565765882.65234
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | chi2: 12.985856210425569
[2024-06-26 22:24:59] 2024-06-27 02:24:43,106 | INFO     | model: linear, x: [1719444397.0, 1719444458.0, 1719444519.0, 1719444580.0, 1719444641.0, 1719444702.0, 1719444763.0, 1719444824.0, 1719444885.0, 1719444946.0, 1719
[2024-06-26 22:24:59] 2024-06-27 02:24:43,107 | INFO     | sum of square deviations: 1523390916.352945
[2024-06-26 22:24:59] 2024-06-27 02:24:43,107 | INFO     | sum of deviations: 278523006874.5294
[2024-06-26 22:24:59] 2024-06-27 02:24:43,107 | INFO     | mean x: 1719449551.5294118
[2024-06-26 22:24:59] 2024-06-27 02:24:43,107 | INFO     | mean y: 2104502.194117647
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | -- intersect: -314366488693.5382
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | intersect: -314366488693.5382
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | chi2: 12.644944771558961
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | current chi2=12.644944771558961 (change=2.625251915179146 %)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | right removable region: 169
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | model: linear, x: [1719444702.0, 1719444763.0, 1719444824.0, 1719444885.0, 1719444946.0, 1719445007.0, 1719445068.0, 1719445129.0, 1719445190.0, 1719445251.0, 1719
[2024-06-26 22:24:59] 2024-06-27 02:24:43,108 | INFO     | sum of square deviations: 1523387866.352945
[2024-06-26 22:24:59] 2024-06-27 02:24:43,109 | INFO     | sum of deviations: 238838367159.05887
[2024-06-26 22:24:59] 2024-06-27 02:24:43,109 | INFO     | mean x: 1719449856.5294118
[2024-06-26 22:24:59] 2024-06-27 02:24:43,109 | INFO     | mean y: 2172421.8882352943
[2024-06-26 22:24:59] 2024-06-27 02:24:43,109 | INFO     | -- intersect: -269575001727.80844
[2024-06-26 22:24:59] 2024-06-27 02:24:43,109 | INFO     | intersect: -269575001727.80844
[2024-06-26 22:24:59] 2024-06-27 02:24:43,110 | INFO     | chi2: 9.333473875603689
[2024-06-26 22:24:59] 2024-06-27 02:24:43,110 | INFO     | current chi2=9.333473875603689 (change=28.1258491980652 %)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,110 | INFO     | model: linear, x: [1719445007.0, 1719445068.0, 1719445129.0, 1719445190.0, 1719445251.0, 1719445312.0, 1719445373.0, 1719445434.0, 1719445495.0, 1719445556.0, 1719
[2024-06-26 22:24:59] 2024-06-27 02:24:43,110 | INFO     | sum of square deviations: 1392881568.8484864
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | sum of deviations: 202554541777.0001
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | mean x: 1719450009.030303
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | mean y: 2214780.8
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | -- intersect: -250042309087.45776
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | intersect: -250042309087.45776
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | chi2: 8.156151174026085
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | current chi2=8.156151174026085 (change=12.613981860011947 %)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,111 | INFO     | left removable region: 20
[2024-06-26 22:24:59] 2024-06-27 02:24:43,112 | INFO     | model: linear, x: [1719445617.0, 1719445678.0, 1719445739.0, 1719445800.0, 1719445861.0, 1719445922.0, 1719445983.0, 1719446044.0, 1719446105.0, 1719446166.0, 1719
[2024-06-26 22:24:59] 2024-06-27 02:24:43,112 | INFO     | sum of square deviations: 1025692068.8322127
[2024-06-26 22:24:59] 2024-06-27 02:24:43,112 | INFO     | sum of deviations: 132933042428.27519
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | mean x: 1719450131.033557
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | mean y: 2286039.744966443
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | -- intersect: -222844067332.39755
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | intersect: -222844067332.39755
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | chi2: 6.133379941114212
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | -- intersect: -222844067332.39755
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | current memory leak: 129.60 B/s (using 149 data points, chi2=6.13)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,113 | INFO     | ..............................
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . Timing measurements:
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . get job = 0 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . initial setup = 5 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . payload setup = 79 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . stage-in = 0 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . payload execution = 10729 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . stage-out = 2 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | . log creation = 0 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,114 | INFO     | ..............................
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | 
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | job summary report
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | --------------------------------------------------
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | PanDA job id: 6245571442
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | task id: 40092568
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | errors: (none)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 22:24:59] 2024-06-27 02:24:43,234 | INFO     | pilot state: finished 
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | transexitcode: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | exeerrorcode: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | exeerrordiag: 
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | exitcode: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | exitmsg: OK
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | cpuconsumptiontime: 30561 s
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | nevents: 400
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | neventsw: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | pid: 28912
[2024-06-26 22:24:59] 2024-06-27 02:24:43,235 | INFO     | pgrp: 28912
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | corecount: 8
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | event service: False
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | sizes: {0: 2385552, 1: 2387088, 2: 2387088, 12: 2387116, 23: 2387144, 34: 2387172, 45: 2387328, 47: 2387562, 55: 2387618, 10814: 2416105, 10817: 2425401, 10848: 24
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | --------------------------------------------------
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | 
[2024-06-26 22:24:59] 2024-06-27 02:24:43,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-06-26 22:24:59] 2024-06-27 02:24:43,424 | WARNING  | process 28912 is no longer using CPU - aborting
[2024-06-26 22:24:59] 2024-06-27 02:24:43,425 | INFO     | aborting job monitoring since job object (job id=6245571442) has expired
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,518 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 22:24:59] 2024-06-27 02:24:43,521 | INFO     | job 6245571442 has completed (purged errors)
[2024-06-26 22:24:59] 2024-06-27 02:24:43,521 | INFO     | overall cleanup function is called
[2024-06-26 22:24:59] 2024-06-27 02:24:44,530 | INFO     | --- collectZombieJob: --- 10, [28912]
[2024-06-26 22:24:59] 2024-06-27 02:24:44,530 | INFO     | zombie collector waiting for pid 28912
[2024-06-26 22:24:59] 2024-06-27 02:24:44,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 22:24:59] 2024-06-27 02:24:45,541 | INFO     | collected zombie processes
[2024-06-26 22:24:59] 2024-06-27 02:24:45,541 | INFO     | will now attempt to kill all subprocesses of pid=28912
[2024-06-26 22:24:59] 2024-06-27 02:24:45,964 | INFO     | process IDs to be killed: [28912] (in reverse order)
[2024-06-26 22:24:59] 2024-06-27 02:24:46,067 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 22:24:59] 2024-06-27 02:24:46,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 22:24:59] 2024-06-27 02:24:46,074 | INFO     | did not find any defunct processes belonging to 28912
[2024-06-26 22:24:59] 2024-06-27 02:24:46,080 | INFO     | did not find any defunct processes belonging to 28912
[2024-06-26 22:24:59] 2024-06-27 02:24:46,080 | INFO     | ready for new job
[2024-06-26 22:24:59] 2024-06-27 02:24:46,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 22:24:59] 2024-06-27 02:24:46,081 | INFO     | *************************************
[2024-06-26 22:24:59] 2024-06-27 02:24:46,081 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 22:24:59] 2024-06-27 02:24:46,081 | INFO     | *************************************
[2024-06-26 22:24:59] 2024-06-27 02:24:46,081 | INFO     | 
[2024-06-26 22:24:59] 2024-06-27 02:24:46,084 | INFO     | architecture information:
[2024-06-26 22:24:59] 2024-06-27 02:24:46,084 | INFO     | executing command: cat /etc/os-release
[2024-06-26 22:24:59] 2024-06-27 02:24:46,139 | INFO     | cat /etc/os-release:
[2024-06-26 22:24:59] NAME="CentOS Linux"
[2024-06-26 22:24:59] VERSION="7 (Core)"
[2024-06-26 22:24:59] ID="centos"
[2024-06-26 22:24:59] ID_LIKE="rhel fedora"
[2024-06-26 22:24:59] VERSION_ID="7"
[2024-06-26 22:24:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 22:24:59] ANSI_COLOR="0;31"
[2024-06-26 22:24:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 22:24:59] HOME_URL="https://www.centos.org/"
[2024-06-26 22:24:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 22:24:59] 
[2024-06-26 22:24:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 22:24:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 22:24:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 22:24:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 22:24:59] 
[2024-06-26 22:24:59] 2024-06-27 02:24:46,139 | INFO     | *************************************
[2024-06-26 22:24:59] 2024-06-27 02:24:46,641 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-06-26 22:24:59] 2024-06-27 02:24:46,691 | INFO     | sufficient remaining disk space (73427582976 B)
[2024-06-26 22:24:59] 2024-06-27 02:24:46,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 22:24:59] 2024-06-27 02:24:46,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 22:24:59] 2024-06-27 02:24:46,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:24:59] 2024-06-27 02:24:46,935 | INFO     | aborting loop
[2024-06-26 22:24:59] 2024-06-27 02:24:47,020 | INFO     | all data control threads have been joined
[2024-06-26 22:24:59] 2024-06-27 02:24:47,110 | INFO     | all payload control threads have been joined
[2024-06-26 22:24:59] 2024-06-27 02:24:47,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 22:24:59] 2024-06-27 02:24:47,461 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 22:24:59] 2024-06-27 02:24:47,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 22:24:59] 2024-06-27 02:24:47,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 22:24:59] 2024-06-27 02:24:47,697 | INFO     | [job] retrieve thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:47,923 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:47,940 | INFO     | [job] job monitor thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,026 | INFO     | [data] control thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,117 | INFO     | [payload] control thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,251 | INFO     | all job control threads have been joined
[2024-06-26 22:24:59] 2024-06-27 02:24:48,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:24:59] 2024-06-27 02:24:48,355 | INFO     | [payload] validate_post thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,446 | INFO     | [job] validate thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,454 | INFO     | [data] copytool_in thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,507 | INFO     | [payload] failed_post thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,645 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,763 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:48,984 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:49,257 | INFO     | [job] control thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:49,259 | INFO     | [job] queue monitor thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:49,357 | INFO     | [data] copytool_out thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:49,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 22:24:59] 2024-06-27 02:24:53,480 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 22:24:59] 2024-06-27 02:24:53,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309520951104)>', '<ExcThread(monitor, started 140309216335616)>']
[2024-06-26 22:24:59] 2024-06-27 02:24:54,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 22:24:59] 2024-06-27 02:24:54,500 | INFO     | [monitor] control thread has ended
[2024-06-26 22:24:59] 2024-06-27 02:24:58,598 | INFO     | all workflow threads have been joined
[2024-06-26 22:24:59] 2024-06-27 02:24:58,598 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 22:24:59] 2024-06-27 02:24:58,599 | INFO     | traces error code: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:58,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 22:24:59] 2024-06-27 02:24:58,800 [wrapper] ==== pilot stdout END ====
[2024-06-26 22:24:59] 2024-06-27 02:24:58,803 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 22:24:59] 2024-06-27 02:24:58,805 [wrapper] pilotpid: 16596
[2024-06-26 22:24:59] 2024-06-27 02:24:58,809 [wrapper] Pilot exit status: 0
[2024-06-26 22:24:59] 2024-06-27 02:24:58,891 [wrapper] pandaids: 6245571442
[2024-06-26 22:24:59] 2024-06-27 02:24:59,042 [wrapper] cleanup supervisor_pilot 53989 16597
[2024-06-26 22:24:59] 2024-06-27 02:24:59,048 [wrapper] Test setup, not cleaning
[2024-06-26 22:24:59] 2024-06-27 02:24:59,081 [wrapper] ==== wrapper stdout END ====
[2024-06-26 22:24:59] 2024-06-27 02:24:59,087 [wrapper] ==== wrapper stderr END ====
[2024-06-26 22:24:59] 2024-06-27 02:24:59,103 [wrapper] apfmon messages muted
[2024-06-26 22:24:59]  *** Error codes and diagnostics ***
[2024-06-26 22:24:59]     "exeErrorCode": 0,
[2024-06-26 22:24:59]     "exeErrorDiag": "",
[2024-06-26 22:24:59]     "pilotErrorCode": 0,
[2024-06-26 22:24:59]     "pilotErrorDiag": "",
[2024-06-26 22:24:59]  *** Listing of results directory ***
[2024-06-26 22:24:59] total 671320
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 18:53 pilot3.tar.gz
[2024-06-26 22:24:59] -rwx------ 1 boincer umatlas     32220 Jun 26 19:18 runpilot2-wrapper.sh
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 19:18 queuedata.json
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas       100 Jun 26 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 22:24:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 19:20 run_atlas
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas       105 Jun 26 19:20 job.xml
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 19:20 start_atlas.sh
[2024-06-26 22:24:59] drwxrwx--x 2 boincer umatlas      4096 Jun 26 19:20 shared
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas    482511 Jun 26 19:20 input.tar.gz
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas 498239130 Jun 26 19:20 EVNT.40092566._000004.pool.root.1
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas         0 Jun 26 19:20 boinc_lockfile
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas      2636 Jun 26 19:20 pandaJob.out
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas       467 Jun 26 19:20 setup.sh.local
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas   1034703 Jun 26 19:22 agis_schedconf.cvmfs.json
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas   1321363 Jun 26 19:22 cric_ddmendpoints.json
[2024-06-26 22:24:59] drwx------ 4 boincer umatlas      4096 Jun 26 19:22 pilot3
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas      6340 Jun 26 22:22 init_data.xml
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas 183065512 Jun 26 22:23 HITS.40092568._000141.pool.root.1
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas       531 Jun 26 22:23 boinc_task_state.xml
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas        95 Jun 26 22:23 pilot_heartbeat.json
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas      1079 Jun 26 22:24 memory_monitor_summary.json
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas         0 Jun 26 22:24 agis_ddmendpoints.agis.ALL.json
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas    354934 Jun 26 22:24 log.40092568._000141.job.log.tgz.1
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas        28 Jun 26 22:24 wrapper_checkpoint.txt
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas      7746 Jun 26 22:24 heartbeat.json
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas      4211 Jun 26 22:24 pilotlog.txt
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas    936116 Jun 26 22:24 log.40092568._000141.job.log.1
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 22:24 boinc_mmap_file
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas       357 Jun 26 22:24 output.list
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas       620 Jun 26 22:24 runtime_log
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas   1310720 Jun 26 22:24 result.tar.gz
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas     11405 Jun 26 22:24 runtime_log.err
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas       650 Jun 26 22:24 k4BNDmp5qg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4joKDm8I6Jum.diag
[2024-06-26 22:24:59] -rw-r--r-- 1 boincer umatlas     21770 Jun 26 22:24 stderr.txt
[2024-06-26 22:24:59] HITS file was successfully produced:
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas 183065512 Jun 26 22:23 shared/HITS.pool.root.1
[2024-06-26 22:24:59]  *** Contents of shared directory: ***
[2024-06-26 22:24:59] total 667120
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 19:20 start_atlas.sh
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas    482511 Jun 26 19:20 input.tar.gz
[2024-06-26 22:24:59] -rw-r--r-- 2 boincer umatlas 498239130 Jun 26 19:20 ATLAS.root_0
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas 183065512 Jun 26 22:23 HITS.pool.root.1
[2024-06-26 22:24:59] -rw------- 1 boincer umatlas   1310720 Jun 26 22:24 result.tar.gz
22:25:01 (46670): run_atlas exited; CPU time 29664.954700
22:25:01 (46670): called boinc_finish(0)

</stderr_txt>
]]>

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