Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:53:57 (227537): wrapper (7.7.26015): starting
21:53:57 (227537): wrapper: running run_atlas (--nthreads 4)
[2024-06-26 21:53:57] Arguments: --nthreads 4
[2024-06-26 21:53:57] Threads: 4
[2024-06-26 21:53:57] Checking for CVMFS
[2024-06-26 21:53:57] No cvmfs_config command found, will try listing directly
[2024-06-26 21:53:57] CVMFS is ok
[2024-06-26 21:53:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 21:53:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 21:53:57] Further information can be found at the LHC@home message board.
[2024-06-26 21:53:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 21:53:57] Checking for apptainer binary...
[2024-06-26 21:53:57] which: no apptainer in ((null))
[2024-06-26 21:53:57] apptainer is not installed, using version from CVMFS
[2024-06-26 21:53:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 21:53:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-06-26 21:53:58] apptainer works
[2024-06-26 21:53:58] Set ATHENA_PROC_NUMBER=4
[2024-06-26 21:53:58] Set ATHENA_CORE_NUMBER=4
[2024-06-26 21:53:58] Starting ATLAS job with PandaID=6245307309
[2024-06-26 21:53:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 05:58:58]  *** The last 200 lines of the pilot log: ***
[2024-06-27 05:58:58] 2024-06-27 03:58:43,068 | WARNING  | GPU info not found in prmon json
[2024-06-27 05:58:58] 2024-06-27 03:58:43,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 05:58:58] 2024-06-27 03:58:43,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 05:58:58] 2024-06-27 03:58:43,074 | INFO     | fitting pss+swap vs Time
[2024-06-27 05:58:58] 2024-06-27 03:58:43,074 | INFO     | model: linear, x: [1719431669.0, 1719431730.0, 1719431791.0, 1719431852.0, 1719431913.0, 1719431974.0, 1719432035.0, 1719432096.0, 1719432157.0, 1719432218.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,074 | INFO     | sum of square deviations: 33653609598.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,078 | INFO     | sum of deviations: 176979174888.99994
[2024-06-27 05:58:58] 2024-06-27 03:58:43,078 | INFO     | mean x: 1719446187.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,078 | INFO     | mean y: 2351212.976939203
[2024-06-27 05:58:58] 2024-06-27 03:58:43,078 | INFO     | -- intersect: -9039952750.14331
[2024-06-27 05:58:58] 2024-06-27 03:58:43,078 | INFO     | intersect: -9039952750.14331
[2024-06-27 05:58:58] 2024-06-27 03:58:43,079 | INFO     | chi2: 3.9730829737032485
[2024-06-27 05:58:58] 2024-06-27 03:58:43,079 | INFO     | model: linear, x: [1719431669.0, 1719431730.0, 1719431791.0, 1719431852.0, 1719431913.0, 1719431974.0, 1719432035.0, 1719432096.0, 1719432157.0, 1719432218.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,079 | INFO     | sum of square deviations: 32606371358.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,083 | INFO     | sum of deviations: 204478541182.5
[2024-06-27 05:58:58] 2024-06-27 03:58:43,083 | INFO     | mean x: 1719446034.5
[2024-06-27 05:58:58] 2024-06-27 03:58:43,083 | INFO     | mean y: 2355180.540254237
[2024-06-27 05:58:58] 2024-06-27 03:58:43,083 | INFO     | -- intersect: -10780501118.19756
[2024-06-27 05:58:58] 2024-06-27 03:58:43,083 | INFO     | intersect: -10780501118.19756
[2024-06-27 05:58:58] 2024-06-27 03:58:43,084 | INFO     | chi2: 3.2248640648871114
[2024-06-27 05:58:58] 2024-06-27 03:58:43,084 | INFO     | current chi2=3.2248640648871114 (change=18.83219942217149 %)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,084 | INFO     | right removable region: 471
[2024-06-27 05:58:58] 2024-06-27 03:58:43,084 | INFO     | model: linear, x: [1719431974.0, 1719432035.0, 1719432096.0, 1719432157.0, 1719432218.0, 1719432279.0, 1719432340.0, 1719432401.0, 1719432462.0, 1719432523.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,084 | INFO     | sum of square deviations: 32606371358.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,088 | INFO     | sum of deviations: 73306476201.50002
[2024-06-27 05:58:58] 2024-06-27 03:58:43,088 | INFO     | mean x: 1719446339.5
[2024-06-27 05:58:58] 2024-06-27 03:58:43,088 | INFO     | mean y: 2366286.2012711866
[2024-06-27 05:58:58] 2024-06-27 03:58:43,088 | INFO     | -- intersect: -3863336854.525163
[2024-06-27 05:58:58] 2024-06-27 03:58:43,088 | INFO     | intersect: -3863336854.525163
[2024-06-27 05:58:58] 2024-06-27 03:58:43,089 | INFO     | chi2: 1.897725434170156
[2024-06-27 05:58:58] 2024-06-27 03:58:43,089 | INFO     | current chi2=1.897725434170156 (change=52.23544419457931 %)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,089 | INFO     | model: linear, x: [1719432279.0, 1719432340.0, 1719432401.0, 1719432462.0, 1719432523.0, 1719432584.0, 1719432645.0, 1719432706.0, 1719432767.0, 1719432828.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,089 | INFO     | sum of square deviations: 31581087018.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | sum of deviations: -4689363471.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | mean x: 1719446492.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | mean y: 2377887.0128479656
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | -- intersect: 257692391.08068553
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | intersect: 257692391.08068553
[2024-06-27 05:58:58] 2024-06-27 03:58:43,093 | INFO     | chi2: 0.8510384491749724
[2024-06-27 05:58:58] 2024-06-27 03:58:43,094 | INFO     | current chi2=0.8510384491749724 (change=55.15481671630135 %)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,094 | INFO     | model: linear, x: [1719432584.0, 1719432645.0, 1719432706.0, 1719432767.0, 1719432828.0, 1719432889.0, 1719432950.0, 1719433011.0, 1719433072.0, 1719433133.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,094 | INFO     | sum of square deviations: 30577524015.5
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | sum of deviations: -8421958778.000004
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | mean x: 1719446644.5
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | mean y: 2378445.4675324676
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | -- intersect: 475965147.7004808
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | intersect: 475965147.7004808
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | chi2: 0.8259210951185806
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | current chi2=0.8259210951185806 (change=2.9513771182420125 %)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,098 | INFO     | left removable region: 30
[2024-06-27 05:58:58] 2024-06-27 03:58:43,099 | INFO     | model: linear, x: [1719433499.0, 1719433560.0, 1719433621.0, 1719433682.0, 1719433743.0, 1719433804.0, 1719433865.0, 1719433926.0, 1719433987.0, 1719434048.0, 1719
[2024-06-27 05:58:58] 2024-06-27 03:58:43,099 | INFO     | sum of square deviations: 26594507940.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,102 | INFO     | sum of deviations: 32707224121.999996
[2024-06-27 05:58:58] 2024-06-27 03:58:43,102 | INFO     | mean x: 1719446919.0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,102 | INFO     | mean y: 2380819.351473923
[2024-06-27 05:58:58] 2024-06-27 03:58:43,102 | INFO     | -- intersect: -2112278939.4413927
[2024-06-27 05:58:58] 2024-06-27 03:58:43,103 | INFO     | intersect: -2112278939.4413927
[2024-06-27 05:58:58] 2024-06-27 03:58:43,103 | INFO     | chi2: 0.003526761537432048
[2024-06-27 05:58:58] 2024-06-27 03:58:43,103 | INFO     | -- intersect: -2112278939.4413927
[2024-06-27 05:58:58] 2024-06-27 03:58:43,103 | INFO     | current memory leak: 1.23 B/s (using 441 data points, chi2=0.00)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | ..............................
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . Timing measurements:
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . get job = 0 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . initial setup = 1 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . payload setup = 4 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . stage-in = 0 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . payload execution = 29042 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . stage-out = 1 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | . log creation = 0 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,104 | INFO     | ..............................
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | 
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | job summary report
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | --------------------------------------------------
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | PanDA job id: 6245307309
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | task id: 38921013
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | errors: (none)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,243 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | pilot state: finished 
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | transexitcode: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | exeerrorcode: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | exeerrordiag: 
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | exitcode: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | exitmsg: OK
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | cpuconsumptiontime: 112495 s
[2024-06-27 05:58:58] 2024-06-27 03:58:43,244 | INFO     | nevents: 400
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | neventsw: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | pid: 238432
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | pgrp: 238432
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | corecount: 4
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | event service: False
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | sizes: {0: 2386871, 1: 2387070, 4: 2387276, 11: 2387304, 29050: 2425098, 29053: 2434080, 29056: 2434264, 29061: 2434434}
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | --------------------------------------------------
[2024-06-27 05:58:58] 2024-06-27 03:58:43,245 | INFO     | 
[2024-06-27 05:58:58] 2024-06-27 03:58:43,246 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-06-27 05:58:58] 2024-06-27 03:58:43,269 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,269 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,269 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,269 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,272 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 05:58:58] 2024-06-27 03:58:43,272 | INFO     | job 6245307309 has completed (purged errors)
[2024-06-27 05:58:58] 2024-06-27 03:58:43,272 | INFO     | overall cleanup function is called
[2024-06-27 05:58:58] 2024-06-27 03:58:44,280 | INFO     | --- collectZombieJob: --- 10, [238432]
[2024-06-27 05:58:58] 2024-06-27 03:58:44,280 | INFO     | zombie collector waiting for pid 238432
[2024-06-27 05:58:58] 2024-06-27 03:58:44,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 05:58:58] 2024-06-27 03:58:45,285 | INFO     | collected zombie processes
[2024-06-27 05:58:58] 2024-06-27 03:58:45,286 | INFO     | will now attempt to kill all subprocesses of pid=238432
[2024-06-27 05:58:58] 2024-06-27 03:58:45,379 | INFO     | process IDs to be killed: [238432] (in reverse order)
[2024-06-27 05:58:58] 2024-06-27 03:58:45,443 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 05:58:58] 2024-06-27 03:58:45,443 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 05:58:58] 2024-06-27 03:58:45,448 | INFO     | did not find any defunct processes belonging to 238432
[2024-06-27 05:58:58] 2024-06-27 03:58:45,452 | INFO     | did not find any defunct processes belonging to 238432
[2024-06-27 05:58:58] 2024-06-27 03:58:45,452 | INFO     | ready for new job
[2024-06-27 05:58:58] 2024-06-27 03:58:45,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 05:58:58] 2024-06-27 03:58:45,455 | INFO     | *************************************
[2024-06-27 05:58:58] 2024-06-27 03:58:45,456 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 05:58:58] 2024-06-27 03:58:45,456 | INFO     | *************************************
[2024-06-27 05:58:58] 2024-06-27 03:58:45,456 | INFO     | 
[2024-06-27 05:58:58] 2024-06-27 03:58:45,458 | INFO     | architecture information:
[2024-06-27 05:58:58] 2024-06-27 03:58:45,459 | INFO     | executing command: cat /etc/os-release
[2024-06-27 05:58:58] 2024-06-27 03:58:45,471 | INFO     | cat /etc/os-release:
[2024-06-27 05:58:58] NAME="CentOS Linux"
[2024-06-27 05:58:58] VERSION="7 (Core)"
[2024-06-27 05:58:58] ID="centos"
[2024-06-27 05:58:58] ID_LIKE="rhel fedora"
[2024-06-27 05:58:58] VERSION_ID="7"
[2024-06-27 05:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 05:58:58] ANSI_COLOR="0;31"
[2024-06-27 05:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 05:58:58] HOME_URL="https://www.centos.org/"
[2024-06-27 05:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 05:58:58] 
[2024-06-27 05:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 05:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 05:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 05:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 05:58:58] 
[2024-06-27 05:58:58] 2024-06-27 03:58:45,471 | INFO     | *************************************
[2024-06-27 05:58:58] 2024-06-27 03:58:45,974 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-06-27 05:58:58] 2024-06-27 03:58:45,994 | INFO     | sufficient remaining disk space (1703122305024 B)
[2024-06-27 05:58:58] 2024-06-27 03:58:45,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 05:58:58] 2024-06-27 03:58:45,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 05:58:58] 2024-06-27 03:58:45,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 05:58:58] 2024-06-27 03:58:45,995 | INFO     | aborting loop
[2024-06-27 05:58:58] 2024-06-27 03:58:46,166 | INFO     | all payload control threads have been joined
[2024-06-27 05:58:58] 2024-06-27 03:58:46,345 | INFO     | all job control threads have been joined
[2024-06-27 05:58:58] 2024-06-27 03:58:46,404 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 05:58:58] 2024-06-27 03:58:46,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 05:58:58] 2024-06-27 03:58:46,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 05:58:58] 2024-06-27 03:58:46,967 | INFO     | all data control threads have been joined
[2024-06-27 05:58:58] 2024-06-27 03:58:47,000 | INFO     | [job] retrieve thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,001 | INFO     | [job] job monitor thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,105 | INFO     | [job] validate thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,114 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,166 | INFO     | [payload] control thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,204 | INFO     | [payload] validate_post thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,235 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,351 | INFO     | [job] control thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,421 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 05:58:58] 2024-06-27 03:58:47,637 | INFO     | [payload] failed_post thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,676 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 05:58:58] 2024-06-27 03:58:47,902 | INFO     | [data] copytool_in thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:47,972 | INFO     | [data] control thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:48,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 05:58:58] 2024-06-27 03:58:48,235 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:49,185 | INFO     | [job] queue monitor thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:49,426 | INFO     | [data] copytool_out thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:51,839 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 05:58:58] 2024-06-27 03:58:52,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47417562207296)>', '<ExcThread(monitor, started 47417744582400)>']
[2024-06-27 05:58:58] 2024-06-27 03:58:53,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 05:58:58] 2024-06-27 03:58:53,432 | INFO     | [monitor] control thread has ended
[2024-06-27 05:58:58] 2024-06-27 03:58:57,452 | INFO     | all workflow threads have been joined
[2024-06-27 05:58:58] 2024-06-27 03:58:57,452 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 05:58:58] 2024-06-27 03:58:57,453 | INFO     | traces error code: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:57,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 05:58:58] 2024-06-27 03:58:57,546 [wrapper] ==== pilot stdout END ====
[2024-06-27 05:58:58] 2024-06-27 03:58:57,549 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 05:58:58] 2024-06-27 03:58:57,552 [wrapper] pilotpid: 231546
[2024-06-27 05:58:58] 2024-06-27 03:58:57,555 [wrapper] Pilot exit status: 0
[2024-06-27 05:58:58] 2024-06-27 03:58:57,565 [wrapper] pandaids: 6245307309
[2024-06-27 05:58:58] 2024-06-27 03:58:57,604 [wrapper] cleanup supervisor_pilot  651429 231547
[2024-06-27 05:58:58] 2024-06-27 03:58:57,607 [wrapper] Test setup, not cleaning
[2024-06-27 05:58:58] 2024-06-27 03:58:57,610 [wrapper] ==== wrapper stdout END ====
[2024-06-27 05:58:58] 2024-06-27 03:58:57,613 [wrapper] ==== wrapper stderr END ====
[2024-06-27 05:58:58] 2024-06-27 03:58:57,619 [wrapper] apfmon messages muted
[2024-06-27 05:58:58]  *** Error codes and diagnostics ***
[2024-06-27 05:58:58]     "exeErrorCode": 0,
[2024-06-27 05:58:58]     "exeErrorDiag": "",
[2024-06-27 05:58:58]     "pilotErrorCode": 0,
[2024-06-27 05:58:58]     "pilotErrorDiag": "",
[2024-06-27 05:58:58]  *** Listing of results directory ***
[2024-06-27 05:58:58] total 872492
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 05:58:58] -rwx------ 1 boinc boinc     32220 Jun 26 20:24 runpilot2-wrapper.sh
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc      5654 Jun 26 20:24 queuedata.json
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc       100 Jun 26 21:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 05:58:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 26 21:07 run_atlas
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc       105 Jun 26 21:07 job.xml
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc      6455 Jun 26 21:53 init_data.xml
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc 540549801 Jun 26 21:53 EVNT.38776210._000514.pool.root.1
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc     17537 Jun 26 21:53 start_atlas.sh
[2024-06-27 05:58:58] drwxrwx--x 2 boinc boinc      4096 Jun 26 21:53 shared
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc    482505 Jun 26 21:53 input.tar.gz
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc         0 Jun 26 21:53 boinc_lockfile
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc      2646 Jun 26 21:53 pandaJob.out
[2024-06-27 05:58:58] -rw------- 1 boinc boinc       424 Jun 26 21:53 setup.sh.local
[2024-06-27 05:58:58] -rw------- 1 boinc boinc   1034743 Jun 26 21:54 agis_schedconf.cvmfs.json
[2024-06-27 05:58:58] -rw------- 1 boinc boinc   1321363 Jun 26 21:54 cric_ddmendpoints.json
[2024-06-27 05:58:58] drwx------ 4 boinc boinc      4096 Jun 26 21:54 pilot3
[2024-06-27 05:58:58] -rw------- 1 boinc boinc 340712607 Jun 27 05:57 HITS.38921013._055551.pool.root.1
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc       533 Jun 27 05:57 boinc_task_state.xml
[2024-06-27 05:58:58] -rw------- 1 boinc boinc        95 Jun 27 05:58 pilot_heartbeat.json
[2024-06-27 05:58:58] -rw------- 1 boinc boinc      1045 Jun 27 05:58 memory_monitor_summary.json
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc      8192 Jun 27 05:58 boinc_mmap_file
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc        29 Jun 27 05:58 wrapper_checkpoint.txt
[2024-06-27 05:58:58] -rw------- 1 boinc boinc         0 Jun 27 05:58 agis_ddmendpoints.agis.ALL.json
[2024-06-27 05:58:58] -rw------- 1 boinc boinc    507542 Jun 27 05:58 log.38921013._055551.job.log.tgz.1
[2024-06-27 05:58:58] -rw------- 1 boinc boinc      7766 Jun 27 05:58 heartbeat.json
[2024-06-27 05:58:58] -rw------- 1 boinc boinc      4222 Jun 27 05:58 pilotlog.txt
[2024-06-27 05:58:58] -rw------- 1 boinc boinc   3804065 Jun 27 05:58 log.38921013._055551.job.log.1
[2024-06-27 05:58:58] -rw------- 1 boinc boinc       357 Jun 27 05:58 output.list
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc       620 Jun 27 05:58 runtime_log
[2024-06-27 05:58:58] -rw------- 1 boinc boinc   4331520 Jun 27 05:58 result.tar.gz
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc     11410 Jun 27 05:58 runtime_log.err
[2024-06-27 05:58:58] -rw------- 1 boinc boinc       660 Jun 27 05:58 KhYLDmXUmg5n7Olcko1bjSoqABFKDmABFKDmOtvXDmKxrKDmNOFUCn.diag
[2024-06-27 05:58:58] -rw-r--r-- 1 boinc boinc     21276 Jun 27 05:58 stderr.txt
[2024-06-27 05:58:58] HITS file was successfully produced:
[2024-06-27 05:58:58] -rw------- 1 boinc boinc 340712607 Jun 27 05:57 shared/HITS.pool.root.1
[2024-06-27 05:58:58]  *** Contents of shared directory: ***
[2024-06-27 05:58:58] total 865344
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc 540549801 Jun 26 21:53 ATLAS.root_0
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc     17537 Jun 26 21:53 start_atlas.sh
[2024-06-27 05:58:58] -rw-r--r-- 2 boinc boinc    482505 Jun 26 21:53 input.tar.gz
[2024-06-27 05:58:58] -rw------- 1 boinc boinc 340712607 Jun 27 05:57 HITS.pool.root.1
[2024-06-27 05:58:58] -rw------- 1 boinc boinc   4331520 Jun 27 05:58 result.tar.gz
05:58:59 (227537): run_atlas exited; CPU time 112247.986902
05:58:59 (227537): called boinc_finish(0)

</stderr_txt>
]]>

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