Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:43:27 (3562896): wrapper (7.7.26015): starting
00:43:27 (3562896): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 00:43:27] Arguments: --nthreads 4
[2024-06-27 00:43:27] Threads: 4
[2024-06-27 00:43:27] Checking for CVMFS
[2024-06-27 00:43:27] No cvmfs_config command found, will try listing directly
[2024-06-27 00:43:34] CVMFS is ok
[2024-06-27 00:43:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 00:43:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 00:43:34] Further information can be found at the LHC@home message board.
[2024-06-27 00:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 00:43:34] Checking for apptainer binary...
[2024-06-27 00:43:34] which: no apptainer in ((null))
[2024-06-27 00:43:34] apptainer is not installed, using version from CVMFS
[2024-06-27 00:43:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 00:43:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-06-27 00:43:35] apptainer works
[2024-06-27 00:43:35] Set ATHENA_PROC_NUMBER=4
[2024-06-27 00:43:35] Set ATHENA_CORE_NUMBER=4
[2024-06-27 00:43:35] Starting ATLAS job with PandaID=6245281499
[2024-06-27 00:43:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 00:47:58]  *** The last 200 lines of the pilot log: ***
[2024-06-27 00:47:58] 2024-06-26 22:47:45,132 | INFO     | using path: /scratch/boinc/var/slot88/slots/1/PanDA_Pilot-6245281499/memory_monitor_summary.json (trf name=prmon)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard info from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | WARNING  | GPU info not found in prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | found no stored workdir sizes
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | INFO     | will not add max space = 0 B to job metrics
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | WARNING  | wrong length of table data, x=[1719441887.0], y=[1537.0] (must be same and length>=4)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . Timing measurements:
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . get job = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . initial setup = 3 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . payload setup = 5 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . stage-in = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . payload execution = 16 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . stage-out = 20 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . log creation = 13 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot88/slots/1/PanDA_Pilot-6245281499/pilotlog.txt
[2024-06-27 00:47:58] 2024-06-26 22:47:45,148 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2024-06-27 00:47:58] - Log from pilotlog.txt -
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard info from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | WARNING  | GPU info not found in prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | found no stored workdir sizes
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | INFO     | will not add max space = 0 B to job metrics
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | WARNING  | wrong length of table data, x=[1719441887.0], y=[1537.0] (must be same and length>=4)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . Timing measurements:
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . get job = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . initial setup = 3 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . payload setup = 5 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . stage-in = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . payload execution = 16 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . stage-out = 20 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . log creation = 13 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot88/slots/1/PanDA_Pilot-6245281499/pilotlog.txt
[2024-06-27 00:47:58] 2024-06-26 22:47:45,148 | WARNING  | 
[2024-06-27 00:47:58] [begin log extracts]
[2024-06-27 00:47:58] - Log from pilotlog.txt -
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard info from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | INFO     | extracted standard memory fields from prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,133 | WARNING  | GPU info not found in prmon json
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | WARNING  | found no stored workdir sizes
[2024-06-27 00:47:58] 2024-06-26 22:47:45,134 | INFO     | will not add max space = 0 B to job metrics
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | WARNING  | wrong length of table data, x=[1719441887.0], y=[1537.0] (must be same and length>=4)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . Timing measurements:
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . get job = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . initial setup = 3 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . payload setup = 5 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,135 | INFO     | . stage-in = 0 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . payload execution = 16 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . stage-out = 20 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | . log creation = 13 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | ..............................
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2024-06-27 00:47:58] 2024-06-26 22:47:45,136 | INFO     | executing command: tail -n 20 /scratch/boinc/var/slot88/slots/1/PanDA_Pilot-6245281499/pilotlog.txt
[2024-06-27 00:47:58] [end log extracts]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,148 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,148 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2024-06-27 00:44:56,552 CRITICAL Transform executor raised TransformValidationExcep
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | 
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | job summary report
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | --------------------------------------------------
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | PanDA job id: 6245281499
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | task id: 40092559
[2024-06-27 00:47:58] 2024-06-26 22:47:45,234 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2024-06-27 00:44:56,552 CRITICAL Transform executor raised TransformValidationExceptio
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | pilot state: failed 
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | transexitcode: 65
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | exeerrorcode: 65
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | exitcode: 65
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | cpuconsumptiontime: 21 s
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | nevents: 0
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | neventsw: 0
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | pid: 3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:45,235 | INFO     | pgrp: 3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | corecount: 4
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | event service: False
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | sizes: {0: 2387071, 4: 2387277, 11: 2387305, 45: 2391276, 66: 2414914, 67: 2414862, 68: 2415018, 187: 2415160}
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | --------------------------------------------------
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | 
[2024-06-27 00:47:58] 2024-06-26 22:47:45,236 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/1
[2024-06-27 00:47:58] 2024-06-26 22:47:45,253 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,253 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,253 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | job 6245281499 has completed (purged errors)
[2024-06-27 00:47:58] 2024-06-26 22:47:45,255 | INFO     | overall cleanup function is called
[2024-06-27 00:47:58] 2024-06-26 22:47:46,261 | INFO     | --- collectZombieJob: --- 10, [3575346]
[2024-06-27 00:47:58] 2024-06-26 22:47:46,262 | INFO     | zombie collector waiting for pid 3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:46,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 00:47:58] 2024-06-26 22:47:47,267 | INFO     | collected zombie processes
[2024-06-27 00:47:58] 2024-06-26 22:47:47,267 | INFO     | will now attempt to kill all subprocesses of pid=3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:47,432 | INFO     | process IDs to be killed: [3575346] (in reverse order)
[2024-06-27 00:47:58] 2024-06-26 22:47:47,519 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 00:47:58] 2024-06-26 22:47:47,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 00:47:58] 2024-06-26 22:47:47,531 | INFO     | did not find any defunct processes belonging to 3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:47,537 | INFO     | did not find any defunct processes belonging to 3575346
[2024-06-27 00:47:58] 2024-06-26 22:47:47,537 | INFO     | ready for new job
[2024-06-27 00:47:58] 2024-06-26 22:47:47,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 00:47:58] 2024-06-26 22:47:47,538 | INFO     | *************************************
[2024-06-27 00:47:58] 2024-06-26 22:47:47,538 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 00:47:58] 2024-06-26 22:47:47,538 | INFO     | *************************************
[2024-06-27 00:47:58] 2024-06-26 22:47:47,538 | INFO     | 
[2024-06-27 00:47:58] 2024-06-26 22:47:47,545 | INFO     | architecture information:
[2024-06-27 00:47:58] 2024-06-26 22:47:47,545 | INFO     | executing command: cat /etc/os-release
[2024-06-27 00:47:58] 2024-06-26 22:47:47,557 | INFO     | cat /etc/os-release:
[2024-06-27 00:47:58] NAME="CentOS Linux"
[2024-06-27 00:47:58] VERSION="7 (Core)"
[2024-06-27 00:47:58] ID="centos"
[2024-06-27 00:47:58] ID_LIKE="rhel fedora"
[2024-06-27 00:47:58] VERSION_ID="7"
[2024-06-27 00:47:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 00:47:58] ANSI_COLOR="0;31"
[2024-06-27 00:47:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 00:47:58] HOME_URL="https://www.centos.org/"
[2024-06-27 00:47:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 00:47:58] 
[2024-06-27 00:47:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 00:47:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 00:47:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 00:47:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 00:47:58] 
[2024-06-27 00:47:58] 2024-06-26 22:47:47,557 | INFO     | *************************************
[2024-06-27 00:47:58] 2024-06-26 22:47:48,060 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/1
[2024-06-27 00:47:58] 2024-06-26 22:47:48,080 | INFO     | sufficient remaining disk space (3293483892736 B)
[2024-06-27 00:47:58] 2024-06-26 22:47:48,080 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 00:47:58] 2024-06-26 22:47:48,080 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 00:47:58] 2024-06-26 22:47:48,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 00:47:58] 2024-06-26 22:47:48,081 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 00:47:58] 2024-06-26 22:47:48,081 | INFO     | aborting loop
[2024-06-27 00:47:58] 2024-06-26 22:47:48,081 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 00:47:58] 2024-06-26 22:47:48,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 00:47:58] 2024-06-26 22:47:48,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 00:47:58] 2024-06-26 22:47:48,648 | INFO     | all payload control threads have been joined
[2024-06-27 00:47:58] 2024-06-26 22:47:48,869 | INFO     | all job control threads have been joined
[2024-06-27 00:47:58] 2024-06-26 22:47:48,884 | INFO     | all data control threads have been joined
[2024-06-27 00:47:58] 2024-06-26 22:47:48,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 00:47:58] 2024-06-26 22:47:48,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 00:47:58] 2024-06-26 22:47:49,081 | INFO     | [job] retrieve thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,087 | INFO     | [job] job monitor thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,312 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,654 | INFO     | [payload] control thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,729 | INFO     | [data] copytool_in thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,875 | INFO     | [job] control thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,878 | INFO     | [job] validate thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:49,890 | INFO     | [data] control thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,006 | INFO     | [payload] validate_post thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,087 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,098 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 00:47:58] 2024-06-26 22:47:50,245 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,627 | INFO     | [payload] failed_post thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:50,919 | INFO     | [data] copytool_out thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:51,249 | INFO     | [job] queue monitor thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:52,962 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 00:47:58] 2024-06-26 22:47:52,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46942663287872)>', '<ExcThread(monitor, started 46942996416256)>']
[2024-06-27 00:47:58] 2024-06-26 22:47:53,106 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 00:47:58] 2024-06-26 22:47:53,107 | INFO     | [monitor] control thread has ended
[2024-06-27 00:47:58] 2024-06-26 22:47:57,989 | INFO     | all workflow threads have been joined
[2024-06-27 00:47:58] 2024-06-26 22:47:57,989 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 00:47:58] 2024-06-26 22:47:57,990 | INFO     | traces error code: 0
[2024-06-27 00:47:58] 2024-06-26 22:47:57,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 00:47:58] 2024-06-26 22:47:58,107 [wrapper] ==== pilot stdout END ====
[2024-06-27 00:47:58] 2024-06-26 22:47:58,109 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 00:47:58] 2024-06-26 22:47:58,111 [wrapper] pilotpid: 3567734
[2024-06-27 00:47:58] 2024-06-26 22:47:58,114 [wrapper] Pilot exit status: 0
[2024-06-27 00:47:58] 2024-06-26 22:47:58,123 [wrapper] pandaids: 6245281499
[2024-06-27 00:47:58] 2024-06-26 22:47:58,201 [wrapper] cleanup supervisor_pilot 3567739 3567735
[2024-06-27 00:47:58] 2024-06-26 22:47:58,204 [wrapper] Test setup, not cleaning
[2024-06-27 00:47:58] 2024-06-26 22:47:58,206 [wrapper] ==== wrapper stdout END ====
[2024-06-27 00:47:58] 2024-06-26 22:47:58,208 [wrapper] ==== wrapper stderr END ====
[2024-06-27 00:47:58] 2024-06-26 22:47:58,213 [wrapper] apfmon messages muted
[2024-06-27 00:47:58]  *** Error codes and diagnostics ***
[2024-06-27 00:47:58]     "exeErrorCode": 65,
[2024-06-27 00:47:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2024-06-27 00:47:58]     "pilotErrorCode": 1305,
[2024-06-27 00:47:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2024-06-27 00:44:56,552 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2024-06-27 00:47:58]  *** Listing of results directory ***
[2024-06-27 00:47:58] total 489036
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc      5654 Jun 26 20:01 queuedata.json
[2024-06-27 00:47:58] -rwx------ 1 boinc boinc     32220 Jun 26 20:01 runpilot2-wrapper.sh
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc       100 Jun 27 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 00:47:58] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 00:15 run_atlas
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc       105 Jun 27 00:15 job.xml
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc 498064786 Jun 27 00:43 EVNT.40092557._000005.pool.root.1
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc     17537 Jun 27 00:43 start_atlas.sh
[2024-06-27 00:47:58] drwxrwx--x 2 boinc boinc      4096 Jun 27 00:43 shared
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc    482507 Jun 27 00:43 input.tar.gz
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc      6642 Jun 27 00:43 init_data.xml
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc         0 Jun 27 00:43 boinc_lockfile
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc      2632 Jun 27 00:43 pandaJob.out
[2024-06-27 00:47:58] -rw------- 1 boinc boinc       424 Jun 27 00:43 setup.sh.local
[2024-06-27 00:47:58] -rw------- 1 boinc boinc         0 Jun 27 00:44 agis_schedconf.cvmfs.json
[2024-06-27 00:47:58] -rw------- 1 boinc boinc         0 Jun 27 00:44 agis_schedconf.agis.BOINC_MCORE.json
[2024-06-27 00:47:58] -rw------- 1 boinc boinc         0 Jun 27 00:44 agis_ddmendpoints.agis.ALL.json
[2024-06-27 00:47:58] -rw------- 1 boinc boinc   1321363 Jun 27 00:44 cric_ddmendpoints.json
[2024-06-27 00:47:58] drwx------ 4 boinc boinc      4096 Jun 27 00:44 pilot3
[2024-06-27 00:47:58] -rw------- 1 boinc boinc       936 Jun 27 00:45 memory_monitor_summary.json
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc       523 Jun 27 00:45 boinc_task_state.xml
[2024-06-27 00:47:58] -rw------- 1 boinc boinc     20123 Jun 27 00:45 log.40092559._000110.job.log.tgz.1
[2024-06-27 00:47:58] -rw------- 1 boinc boinc        95 Jun 27 00:47 pilot_heartbeat.json
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc        22 Jun 27 00:47 wrapper_checkpoint.txt
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc      8192 Jun 27 00:47 boinc_mmap_file
[2024-06-27 00:47:58] -rw------- 1 boinc boinc      8350 Jun 27 00:47 heartbeat.json
[2024-06-27 00:47:58] -rw------- 1 boinc boinc      4345 Jun 27 00:47 pilotlog.txt
[2024-06-27 00:47:58] -rw------- 1 boinc boinc     78606 Jun 27 00:47 log.40092559._000110.job.log.1
[2024-06-27 00:47:58] -rw------- 1 boinc boinc       188 Jun 27 00:47 output.list
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc       620 Jun 27 00:47 runtime_log
[2024-06-27 00:47:58] -rw------- 1 boinc boinc    122880 Jun 27 00:47 result.tar.gz
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc     11256 Jun 27 00:47 runtime_log.err
[2024-06-27 00:47:58] -rw------- 1 boinc boinc       643 Jun 27 00:47 Y8WNDmX8lg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmlfoKDmcwJITm.diag
[2024-06-27 00:47:58] -rw-r--r-- 1 boinc boinc     21413 Jun 27 00:47 stderr.txt
[2024-06-27 00:47:58] No HITS result produced
[2024-06-27 00:47:58]  *** Contents of shared directory: ***
[2024-06-27 00:47:58] total 487008
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc 498064786 Jun 27 00:43 ATLAS.root_0
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc     17537 Jun 27 00:43 start_atlas.sh
[2024-06-27 00:47:58] -rw-r--r-- 2 boinc boinc    482507 Jun 27 00:43 input.tar.gz
[2024-06-27 00:47:58] -rw------- 1 boinc boinc    122880 Jun 27 00:47 result.tar.gz
00:48:00 (3562896): run_atlas exited; CPU time 20.576041
00:48:00 (3562896): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN