Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:03 (3133596): wrapper (7.7.26015): starting
06:45:03 (3133596): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 06:45:03] Arguments: --nthreads 4
[2024-06-27 06:45:03] Threads: 4
[2024-06-27 06:45:03] Checking for CVMFS
[2024-06-27 06:45:03] No cvmfs_config command found, will try listing directly
[2024-06-27 06:45:03] CVMFS is ok
[2024-06-27 06:45:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 06:45:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 06:45:03] Further information can be found at the LHC@home message board.
[2024-06-27 06:45:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 06:45:03] Checking for apptainer binary...
[2024-06-27 06:45:03] which: no apptainer in ((null))
[2024-06-27 06:45:03] apptainer is not installed, using version from CVMFS
[2024-06-27 06:45:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 06:45:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-27 06:45:04] apptainer works
[2024-06-27 06:45:04] Set ATHENA_PROC_NUMBER=4
[2024-06-27 06:45:04] Set ATHENA_CORE_NUMBER=4
[2024-06-27 06:45:04] Starting ATLAS job with PandaID=6245281515
[2024-06-27 06:45:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 08:41:03]  *** The last 200 lines of the pilot log: ***
[2024-06-27 08:41:03] 2024-06-27 06:40:40,932 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-27 08:41:03] 2024-06-27 06:40:40,933 | INFO     | fitting pss+swap vs Time
[2024-06-27 08:41:03] 2024-06-27 06:40:40,933 | INFO     | model: linear, x: [1719463534.0, 1719463595.0, 1719463656.0, 1719463717.0, 1719463778.0, 1719463839.0, 1719463900.0, 1719463961.0, 1719464022.0, 1719464083.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,933 | INFO     | sum of square deviations: 459366752.5
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | sum of deviations: 22866196358.000027
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | mean x: 1719466980.5
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | mean y: 2278164.01754386
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | -- intersect: -85588743374.2911
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | intersect: -85588743374.2911
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | chi2: 4.3439042371300935
[2024-06-27 08:41:03] 2024-06-27 06:40:40,934 | INFO     | model: linear, x: [1719463534.0, 1719463595.0, 1719463656.0, 1719463717.0, 1719463778.0, 1719463839.0, 1719463900.0, 1719463961.0, 1719464022.0, 1719464083.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | sum of square deviations: 401533110.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | sum of deviations: 28800808766.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | mean x: 1719466828.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | mean y: 2293157.2752293576
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | -- intersect: -123330089800.4057
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | intersect: -123330089800.4057
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | chi2: 3.617570265573254
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | current chi2=3.617570265573254 (change=16.72076390055758 %)
[2024-06-27 08:41:03] 2024-06-27 06:40:40,935 | INFO     | right removable region: 108
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | model: linear, x: [1719463839.0, 1719463900.0, 1719463961.0, 1719464022.0, 1719464083.0, 1719464144.0, 1719464205.0, 1719464266.0, 1719464327.0, 1719464388.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | sum of square deviations: 401533110.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | sum of deviations: -580258108.000001
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | mean x: 1719467133.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | mean y: 2339596.0366972475
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | -- intersect: 2487152729.7849107
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | intersect: 2487152729.7849107
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | chi2: 2.102925279380408
[2024-06-27 08:41:03] 2024-06-27 06:40:40,936 | INFO     | current chi2=2.102925279380408 (change=51.58905066540424 %)
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | model: linear, x: [1719464144.0, 1719464205.0, 1719464266.0, 1719464327.0, 1719464388.0, 1719464449.0, 1719464510.0, 1719464571.0, 1719464632.0, 1719464693.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | sum of square deviations: 348769330.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | sum of deviations: -18086531537.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | mean x: 1719467285.5
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | mean y: 2390216.3653846155
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | -- intersect: 89170779208.6989
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | intersect: 89170779208.6989
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | chi2: 0.9270703365740206
[2024-06-27 08:41:03] 2024-06-27 06:40:40,937 | INFO     | current chi2=0.9270703365740206 (change=55.91520318557555 %)
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | model: linear, x: [1719464449.0, 1719464510.0, 1719464571.0, 1719464632.0, 1719464693.0, 1719464754.0, 1719464815.0, 1719464876.0, 1719464937.0, 1719464998.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | sum of square deviations: 300842850.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | sum of deviations: -17627704421.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | mean x: 1719467438.0
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | mean y: 2388511.272727273
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | -- intersect: 100753540677.921
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | intersect: 100753540677.921
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | chi2: 0.8909820383994194
[2024-06-27 08:41:03] 2024-06-27 06:40:40,938 | INFO     | current chi2=0.8909820383994194 (change=3.8927249369195867 %)
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | left removable region: 30
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | model: linear, x: [1719465364.0, 1719465425.0, 1719465486.0, 1719465547.0, 1719465608.0, 1719465669.0, 1719465730.0, 1719465791.0, 1719465852.0, 1719465913.0, 1719
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | sum of square deviations: 147126479.5
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | sum of deviations: -1045356176.4999998
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | mean x: 1719467712.5
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | mean y: 2368698.269230769
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | -- intersect: 12219450216.58423
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | intersect: 12219450216.58423
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | chi2: 0.02762435406140984
[2024-06-27 08:41:03] 2024-06-27 06:40:40,939 | INFO     | -- intersect: 12219450216.58423
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | current memory leak: -7.11 B/s (using 78 data points, chi2=0.03)
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | ..............................
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . Timing measurements:
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . get job = 0 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . initial setup = 1 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . payload setup = 4 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . stage-in = 0 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . payload execution = 6899 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . stage-out = 0 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | . log creation = 0 s
[2024-06-27 08:41:03] 2024-06-27 06:40:40,940 | INFO     | ..............................
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | 
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | job summary report
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | --------------------------------------------------
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | PanDA job id: 6245281515
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | task id: 40092559
[2024-06-27 08:41:03] 2024-06-27 06:40:41,024 | INFO     | errors: (none)
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | pilot state: finished 
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | transexitcode: 0
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | exeerrorcode: 0
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | exeerrordiag: 
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | exitcode: 0
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | exitmsg: OK
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | cpuconsumptiontime: 24755 s
[2024-06-27 08:41:03] 2024-06-27 06:40:41,025 | INFO     | nevents: 400
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | neventsw: 0
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | pid: 3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | pgrp: 3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | corecount: 4
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | event service: False
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | sizes: {0: 2387070, 3: 2387276, 11: 2387304, 6907: 2414529, 6908: 2423511, 6909: 2423567, 6914: 2423865}
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | --------------------------------------------------
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | 
[2024-06-27 08:41:03] 2024-06-27 06:40:41,026 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-27 08:41:03] 2024-06-27 06:40:41,049 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,049 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,052 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 08:41:03] 2024-06-27 06:40:41,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,052 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 08:41:03] 2024-06-27 06:40:41,052 | INFO     | job 6245281515 has completed (purged errors)
[2024-06-27 08:41:03] 2024-06-27 06:40:41,052 | INFO     | overall cleanup function is called
[2024-06-27 08:41:03] 2024-06-27 06:40:42,060 | INFO     | --- collectZombieJob: --- 10, [3144072]
[2024-06-27 08:41:03] 2024-06-27 06:40:42,060 | INFO     | zombie collector waiting for pid 3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:42,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 08:41:03] 2024-06-27 06:40:43,066 | INFO     | collected zombie processes
[2024-06-27 08:41:03] 2024-06-27 06:40:43,066 | INFO     | will now attempt to kill all subprocesses of pid=3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:43,162 | INFO     | process IDs to be killed: [3144072] (in reverse order)
[2024-06-27 08:41:03] 2024-06-27 06:40:43,228 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 08:41:03] 2024-06-27 06:40:43,229 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 08:41:03] 2024-06-27 06:40:43,232 | INFO     | did not find any defunct processes belonging to 3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:43,234 | INFO     | did not find any defunct processes belonging to 3144072
[2024-06-27 08:41:03] 2024-06-27 06:40:43,234 | INFO     | ready for new job
[2024-06-27 08:41:03] 2024-06-27 06:40:43,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 08:41:03] 2024-06-27 06:40:43,236 | INFO     | *************************************
[2024-06-27 08:41:03] 2024-06-27 06:40:43,236 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 08:41:03] 2024-06-27 06:40:43,236 | INFO     | *************************************
[2024-06-27 08:41:03] 2024-06-27 06:40:43,236 | INFO     | 
[2024-06-27 08:41:03] 2024-06-27 06:40:43,238 | INFO     | architecture information:
[2024-06-27 08:41:03] 2024-06-27 06:40:43,238 | INFO     | executing command: cat /etc/os-release
[2024-06-27 08:41:03] 2024-06-27 06:40:43,253 | INFO     | cat /etc/os-release:
[2024-06-27 08:41:03] NAME="CentOS Linux"
[2024-06-27 08:41:03] VERSION="7 (Core)"
[2024-06-27 08:41:03] ID="centos"
[2024-06-27 08:41:03] ID_LIKE="rhel fedora"
[2024-06-27 08:41:03] VERSION_ID="7"
[2024-06-27 08:41:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 08:41:03] ANSI_COLOR="0;31"
[2024-06-27 08:41:03] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 08:41:03] HOME_URL="https://www.centos.org/"
[2024-06-27 08:41:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 08:41:03] 
[2024-06-27 08:41:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 08:41:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 08:41:03] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 08:41:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 08:41:03] 
[2024-06-27 08:41:03] 2024-06-27 06:40:43,254 | INFO     | *************************************
[2024-06-27 08:41:03] 2024-06-27 06:40:43,757 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-27 08:41:03] 2024-06-27 06:40:43,777 | INFO     | sufficient remaining disk space (1702598017024 B)
[2024-06-27 08:41:03] 2024-06-27 06:40:43,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 08:41:03] 2024-06-27 06:40:43,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 08:41:03] 2024-06-27 06:40:43,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 08:41:03] 2024-06-27 06:40:43,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 08:41:03] 2024-06-27 06:40:43,779 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 08:41:03] 2024-06-27 06:40:43,780 | INFO     | aborting loop
[2024-06-27 08:41:03] 2024-06-27 06:40:43,780 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 08:41:03] 2024-06-27 06:40:43,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 08:41:03] 2024-06-27 06:40:43,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 08:41:03] 2024-06-27 06:40:44,199 | INFO     | all job control threads have been joined
[2024-06-27 08:41:03] 2024-06-27 06:40:44,588 | INFO     | all data control threads have been joined
[2024-06-27 08:41:03] 2024-06-27 06:40:44,632 | INFO     | all payload control threads have been joined
[2024-06-27 08:41:03] 2024-06-27 06:40:44,784 | INFO     | [job] retrieve thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:44,785 | INFO     | [job] job monitor thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:44,920 | INFO     | [payload] failed_post thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,175 | INFO     | [job] validate thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,204 | INFO     | [job] control thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,389 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,406 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,425 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,593 | INFO     | [data] control thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,637 | INFO     | [payload] control thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,776 | INFO     | [data] copytool_in thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:45,785 | INFO     | [data] copytool_out thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:46,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 08:41:03] 2024-06-27 06:40:46,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 08:41:03] 2024-06-27 06:40:46,218 | INFO     | [payload] validate_post thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:47,005 | INFO     | [job] queue monitor thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:50,016 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:54,729 | INFO     | job.realtimelogging is not enabled
[2024-06-27 08:41:03] 2024-06-27 06:40:55,734 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 08:41:03] 2024-06-27 06:40:57,412 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47321495073856)>', '<ExcThread(monitor, started 47321675347712)>']
[2024-06-27 08:41:03] 2024-06-27 06:40:57,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 08:41:03] 2024-06-27 06:40:57,850 | INFO     | [monitor] control thread has ended
[2024-06-27 08:41:03] 2024-06-27 06:41:02,431 | INFO     | all workflow threads have been joined
[2024-06-27 08:41:03] 2024-06-27 06:41:02,432 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 08:41:03] 2024-06-27 06:41:02,432 | INFO     | traces error code: 0
[2024-06-27 08:41:03] 2024-06-27 06:41:02,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 08:41:03] 2024-06-27 06:41:02,526 [wrapper] ==== pilot stdout END ====
[2024-06-27 08:41:03] 2024-06-27 06:41:02,530 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 08:41:03] 2024-06-27 06:41:02,533 [wrapper] pilotpid: 3137270
[2024-06-27 08:41:03] 2024-06-27 06:41:02,536 [wrapper] Pilot exit status: 0
[2024-06-27 08:41:03] 2024-06-27 06:41:02,547 [wrapper] pandaids: 6245281515
[2024-06-27 08:41:03] 2024-06-27 06:41:02,588 [wrapper] cleanup supervisor_pilot 3218184 3137271
[2024-06-27 08:41:03] 2024-06-27 06:41:02,592 [wrapper] Test setup, not cleaning
[2024-06-27 08:41:03] 2024-06-27 06:41:02,595 [wrapper] ==== wrapper stdout END ====
[2024-06-27 08:41:03] 2024-06-27 06:41:02,598 [wrapper] ==== wrapper stderr END ====
[2024-06-27 08:41:03] 2024-06-27 06:41:02,604 [wrapper] apfmon messages muted
[2024-06-27 08:41:03]  *** Error codes and diagnostics ***
[2024-06-27 08:41:03]     "exeErrorCode": 0,
[2024-06-27 08:41:03]     "exeErrorDiag": "",
[2024-06-27 08:41:03]     "pilotErrorCode": 0,
[2024-06-27 08:41:03]     "pilotErrorDiag": "",
[2024-06-27 08:41:03]  *** Listing of results directory ***
[2024-06-27 08:41:03] total 666932
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 08:41:03] -rwx------ 1 boinc boinc     32220 Jun 26 20:01 runpilot2-wrapper.sh
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc      5654 Jun 26 20:01 queuedata.json
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc       100 Jun 27 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 08:41:03] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 06:44 run_atlas
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc       105 Jun 27 06:44 job.xml
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc      6454 Jun 27 06:45 init_data.xml
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc 498064786 Jun 27 06:45 EVNT.40092557._000005.pool.root.1
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc     17537 Jun 27 06:45 start_atlas.sh
[2024-06-27 08:41:03] drwxrwx--x 2 boinc boinc      4096 Jun 27 06:45 shared
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc    482496 Jun 27 06:45 input.tar.gz
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc         0 Jun 27 06:45 boinc_lockfile
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc      2631 Jun 27 06:45 pandaJob.out
[2024-06-27 08:41:03] -rw------- 1 boinc boinc       424 Jun 27 06:45 setup.sh.local
[2024-06-27 08:41:03] -rw------- 1 boinc boinc   1035479 Jun 27 06:45 agis_schedconf.cvmfs.json
[2024-06-27 08:41:03] -rw------- 1 boinc boinc         0 Jun 27 06:45 agis_ddmendpoints.agis.ALL.json
[2024-06-27 08:41:03] -rw------- 1 boinc boinc   1321363 Jun 27 06:45 cric_ddmendpoints.json
[2024-06-27 08:41:03] drwx------ 4 boinc boinc      4096 Jun 27 06:45 pilot3
[2024-06-27 08:41:03] -rw------- 1 boinc boinc 179421597 Jun 27 08:40 HITS.40092559._000119.pool.root.1
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc       530 Jun 27 08:40 boinc_task_state.xml
[2024-06-27 08:41:03] -rw------- 1 boinc boinc        95 Jun 27 08:40 pilot_heartbeat.json
[2024-06-27 08:41:03] -rw------- 1 boinc boinc      1038 Jun 27 08:40 memory_monitor_summary.json
[2024-06-27 08:41:03] -rw------- 1 boinc boinc    269961 Jun 27 08:40 log.40092559._000119.job.log.tgz.1
[2024-06-27 08:41:03] -rw------- 1 boinc boinc      7752 Jun 27 08:40 heartbeat.json
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc      8192 Jun 27 08:40 boinc_mmap_file
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc        27 Jun 27 08:40 wrapper_checkpoint.txt
[2024-06-27 08:41:03] -rw------- 1 boinc boinc      4417 Jun 27 08:41 pilotlog.txt
[2024-06-27 08:41:03] -rw------- 1 boinc boinc    682707 Jun 27 08:41 log.40092559._000119.job.log.1
[2024-06-27 08:41:03] -rw------- 1 boinc boinc       357 Jun 27 08:41 output.list
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc       620 Jun 27 08:41 runtime_log
[2024-06-27 08:41:03] -rw------- 1 boinc boinc    972800 Jun 27 08:41 result.tar.gz
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc     11409 Jun 27 08:41 runtime_log.err
[2024-06-27 08:41:03] -rw------- 1 boinc boinc       654 Jun 27 08:41 YUGLDmO8lg5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmHAZKDmHnzCnn.diag
[2024-06-27 08:41:03] -rw-r--r-- 1 boinc boinc     21285 Jun 27 08:41 stderr.txt
[2024-06-27 08:41:03] HITS file was successfully produced:
[2024-06-27 08:41:03] -rw------- 1 boinc boinc 179421597 Jun 27 08:40 shared/HITS.pool.root.1
[2024-06-27 08:41:03]  *** Contents of shared directory: ***
[2024-06-27 08:41:03] total 663064
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc 498064786 Jun 27 06:45 ATLAS.root_0
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc     17537 Jun 27 06:45 start_atlas.sh
[2024-06-27 08:41:03] -rw-r--r-- 2 boinc boinc    482496 Jun 27 06:45 input.tar.gz
[2024-06-27 08:41:03] -rw------- 1 boinc boinc 179421597 Jun 27 08:40 HITS.pool.root.1
[2024-06-27 08:41:03] -rw------- 1 boinc boinc    972800 Jun 27 08:41 result.tar.gz
08:41:04 (3133596): run_atlas exited; CPU time 24683.259965
08:41:04 (3133596): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN