Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:54:23 (2813678): wrapper (7.7.26015): starting
00:54:23 (2813678): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 00:54:23] Arguments: --nthreads 4
[2024-06-27 00:54:23] Threads: 4
[2024-06-27 00:54:23] Checking for CVMFS
[2024-06-27 00:54:23] No cvmfs_config command found, will try listing directly
[2024-06-27 00:54:23] CVMFS is ok
[2024-06-27 00:54:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 00:54:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 00:54:23] Further information can be found at the LHC@home message board.
[2024-06-27 00:54:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 00:54:23] Checking for apptainer binary...
[2024-06-27 00:54:23] which: no apptainer in ((null))
[2024-06-27 00:54:23] apptainer is not installed, using version from CVMFS
[2024-06-27 00:54:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 00:54:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-27 00:54:24] apptainer works
[2024-06-27 00:54:24] Set ATHENA_PROC_NUMBER=4
[2024-06-27 00:54:24] Set ATHENA_CORE_NUMBER=4
[2024-06-27 00:54:24] Starting ATLAS job with PandaID=6245281432
[2024-06-27 00:54:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 02:47:20]  *** The last 200 lines of the pilot log: ***
[2024-06-27 02:47:20] 2024-06-27 00:47:00,072 | INFO     | chi2: 0.113877386728566
[2024-06-27 02:47:20] 2024-06-27 00:47:00,072 | INFO     | current chi2=0.113877386728566 (change=90.53311489488297 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,072 | INFO     | model: linear, x: [1719443411.0, 1719443472.0, 1719443533.0, 1719443594.0, 1719443655.0, 1719443716.0, 1719443777.0, 1719443838.0, 1719443899.0, 1719443960.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,072 | INFO     | sum of square deviations: 265828240.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | sum of deviations: -3973358769.0000005
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | mean x: 1719446278.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | mean y: 2374988.136842105
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | -- intersect: 25703094168.74652
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | intersect: 25703094168.74652
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | chi2: 0.07028624975275286
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | current chi2=0.07028624975275286 (change=38.27901063423188 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | model: linear, x: [1719443716.0, 1719443777.0, 1719443838.0, 1719443899.0, 1719443960.0, 1719444021.0, 1719444082.0, 1719444143.0, 1719444204.0, 1719444265.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,073 | INFO     | sum of square deviations: 226022842.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | sum of deviations: -451475944.9999999
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | mean x: 1719446430.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | mean y: 2361475.9777777777
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | -- intersect: 3436920096.2502584
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | intersect: 3436920096.2502584
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | chi2: 0.02751747358813885
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | current chi2=0.02751747358813885 (change=60.84942120978493 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | model: linear, x: [1719444021.0, 1719444082.0, 1719444143.0, 1719444204.0, 1719444265.0, 1719444326.0, 1719444387.0, 1719444448.0, 1719444509.0, 1719444570.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,074 | INFO     | sum of square deviations: 190403570.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | sum of deviations: 831868589.9999999
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | mean x: 1719446583.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | mean y: 2356208.682352941
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | -- intersect: -7509864305.778211
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | intersect: -7509864305.778211
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | chi2: 0.00015390026295325794
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | current chi2=0.00015390026295325794 (change=99.44071804971371 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | model: linear, x: [1719444326.0, 1719444387.0, 1719444448.0, 1719444509.0, 1719444570.0, 1719444631.0, 1719444692.0, 1719444753.0, 1719444814.0, 1719444875.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,075 | INFO     | sum of square deviations: 158737860.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | sum of deviations: 595855838.4999999
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | mean x: 1719446735.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | mean y: 2357337.8875
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | -- intersect: -6451946483.125585
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | intersect: -6451946483.125585
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | chi2: 7.397239289156106e-05
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | current chi2=7.397239289156106e-05 (change=51.934849575905076 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | model: linear, x: [1719444631.0, 1719444692.0, 1719444753.0, 1719444814.0, 1719444875.0, 1719444936.0, 1719444997.0, 1719445058.0, 1719445119.0, 1719445180.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | sum of square deviations: 130793150.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,076 | INFO     | sum of deviations: 474314954.99999994
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | mean x: 1719446888.0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | mean y: 2358001.2133333334
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | -- intersect: -6233131956.071203
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | intersect: -6233131956.071203
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | chi2: 7.170205782590736e-05
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | current chi2=7.170205782590736e-05 (change=3.0691653695478847 %)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | left removable region: 70
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | model: linear, x: [1719446766.0, 1719446827.0, 1719446888.0, 1719446949.0, 1719447010.0, 1719447071.0, 1719447132.0, 1719447193.0, 1719447254.0, 1719447315.0, 1719
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | sum of square deviations: 12176972.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | sum of deviations: 19774644.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,077 | INFO     | mean x: 1719447772.5
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | mean y: 2362521.4411764704
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | -- intersect: -2789913509.1981616
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | intersect: -2789913509.1981616
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | chi2: 2.7088317193463104e-05
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | -- intersect: -2789913509.1981616
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | current memory leak: 1.62 B/s (using 34 data points, chi2=0.00)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | ..............................
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | . Timing measurements:
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | . get job = 0 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,078 | INFO     | . initial setup = 1 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | . payload setup = 5 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | . stage-in = 0 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | . payload execution = 6698 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | . stage-out = 0 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | . log creation = 0 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,079 | INFO     | ..............................
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | 
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | job summary report
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | --------------------------------------------------
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | PanDA job id: 6245281432
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | task id: 40092559
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | errors: (none)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 02:47:20] 2024-06-27 00:47:00,134 | INFO     | pilot state: finished 
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | transexitcode: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | exeerrorcode: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | exeerrordiag: 
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | exitcode: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | exitmsg: OK
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | cpuconsumptiontime: 23936 s
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | nevents: 400
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | neventsw: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:00,135 | INFO     | pid: 2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | pgrp: 2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | corecount: 4
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | event service: False
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | sizes: {0: 2386159, 1: 2387094, 5: 2387300, 12: 2387356, 6707: 2414495, 6710: 2423661, 6732: 2423775}
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | --------------------------------------------------
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | 
[2024-06-27 02:47:20] 2024-06-27 00:47:00,136 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-27 02:47:20] 2024-06-27 00:47:00,154 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | job 6245281432 has completed (purged errors)
[2024-06-27 02:47:20] 2024-06-27 00:47:00,157 | INFO     | overall cleanup function is called
[2024-06-27 02:47:20] 2024-06-27 00:47:01,165 | INFO     | --- collectZombieJob: --- 10, [2824158]
[2024-06-27 02:47:20] 2024-06-27 00:47:01,165 | INFO     | zombie collector waiting for pid 2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:01,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 02:47:20] 2024-06-27 00:47:02,171 | INFO     | collected zombie processes
[2024-06-27 02:47:20] 2024-06-27 00:47:02,172 | INFO     | will now attempt to kill all subprocesses of pid=2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:02,263 | INFO     | process IDs to be killed: [2824158] (in reverse order)
[2024-06-27 02:47:20] 2024-06-27 00:47:02,329 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 02:47:20] 2024-06-27 00:47:02,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 02:47:20] 2024-06-27 00:47:02,334 | INFO     | did not find any defunct processes belonging to 2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:02,337 | INFO     | did not find any defunct processes belonging to 2824158
[2024-06-27 02:47:20] 2024-06-27 00:47:02,338 | INFO     | ready for new job
[2024-06-27 02:47:20] 2024-06-27 00:47:02,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 02:47:20] 2024-06-27 00:47:02,340 | INFO     | *************************************
[2024-06-27 02:47:20] 2024-06-27 00:47:02,340 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 02:47:20] 2024-06-27 00:47:02,340 | INFO     | *************************************
[2024-06-27 02:47:20] 2024-06-27 00:47:02,340 | INFO     | 
[2024-06-27 02:47:20] 2024-06-27 00:47:02,342 | INFO     | architecture information:
[2024-06-27 02:47:20] 2024-06-27 00:47:02,343 | INFO     | executing command: cat /etc/os-release
[2024-06-27 02:47:20] 2024-06-27 00:47:02,358 | INFO     | cat /etc/os-release:
[2024-06-27 02:47:20] NAME="CentOS Linux"
[2024-06-27 02:47:20] VERSION="7 (Core)"
[2024-06-27 02:47:20] ID="centos"
[2024-06-27 02:47:20] ID_LIKE="rhel fedora"
[2024-06-27 02:47:20] VERSION_ID="7"
[2024-06-27 02:47:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 02:47:20] ANSI_COLOR="0;31"
[2024-06-27 02:47:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 02:47:20] HOME_URL="https://www.centos.org/"
[2024-06-27 02:47:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 02:47:20] 
[2024-06-27 02:47:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 02:47:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 02:47:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 02:47:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 02:47:20] 
[2024-06-27 02:47:20] 2024-06-27 00:47:02,358 | INFO     | *************************************
[2024-06-27 02:47:20] 2024-06-27 00:47:02,861 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-27 02:47:20] 2024-06-27 00:47:02,880 | INFO     | sufficient remaining disk space (1700743086080 B)
[2024-06-27 02:47:20] 2024-06-27 00:47:02,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 02:47:20] 2024-06-27 00:47:02,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 02:47:20] 2024-06-27 00:47:02,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 02:47:20] 2024-06-27 00:47:02,882 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 02:47:20] 2024-06-27 00:47:02,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 02:47:20] 2024-06-27 00:47:02,882 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 02:47:20] 2024-06-27 00:47:02,883 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 02:47:20] 2024-06-27 00:47:02,883 | INFO     | aborting loop
[2024-06-27 02:47:20] 2024-06-27 00:47:02,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 02:47:20] 2024-06-27 00:47:02,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 02:47:20] 2024-06-27 00:47:03,049 | INFO     | all data control threads have been joined
[2024-06-27 02:47:20] 2024-06-27 00:47:03,154 | INFO     | all payload control threads have been joined
[2024-06-27 02:47:20] 2024-06-27 00:47:03,570 | INFO     | all job control threads have been joined
[2024-06-27 02:47:20] 2024-06-27 00:47:03,887 | INFO     | [job] retrieve thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:03,889 | INFO     | [job] job monitor thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:03,924 | INFO     | [job] validate thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,055 | INFO     | [data] control thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,098 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,160 | INFO     | [payload] control thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,300 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,320 | INFO     | [payload] failed_post thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,354 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,575 | INFO     | [job] control thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,889 | INFO     | [data] copytool_out thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:04,973 | INFO     | [payload] validate_post thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:05,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 02:47:20] 2024-06-27 00:47:05,384 | INFO     | [data] copytool_in thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:06,150 | INFO     | [job] queue monitor thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:06,888 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:13,686 | INFO     | job.realtimelogging is not enabled
[2024-06-27 02:47:20] 2024-06-27 00:47:14,692 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 02:47:20] 2024-06-27 00:47:15,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47283490575424)>', '<ExcThread(monitor, started 47283672950528)>']
[2024-06-27 02:47:20] 2024-06-27 00:47:15,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 02:47:20] 2024-06-27 00:47:15,949 | INFO     | [monitor] control thread has ended
[2024-06-27 02:47:20] 2024-06-27 00:47:20,230 | INFO     | all workflow threads have been joined
[2024-06-27 02:47:20] 2024-06-27 00:47:20,231 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 02:47:20] 2024-06-27 00:47:20,231 | INFO     | traces error code: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:20,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 02:47:20] 2024-06-27 00:47:20,319 [wrapper] ==== pilot stdout END ====
[2024-06-27 02:47:20] 2024-06-27 00:47:20,323 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 02:47:20] 2024-06-27 00:47:20,325 [wrapper] pilotpid: 2817344
[2024-06-27 02:47:20] 2024-06-27 00:47:20,328 [wrapper] Pilot exit status: 0
[2024-06-27 02:47:20] 2024-06-27 00:47:20,339 [wrapper] pandaids: 6245281432
[2024-06-27 02:47:20] 2024-06-27 00:47:20,381 [wrapper] cleanup supervisor_pilot 2918576 2817345
[2024-06-27 02:47:20] 2024-06-27 00:47:20,385 [wrapper] Test setup, not cleaning
[2024-06-27 02:47:20] 2024-06-27 00:47:20,388 [wrapper] ==== wrapper stdout END ====
[2024-06-27 02:47:20] 2024-06-27 00:47:20,391 [wrapper] ==== wrapper stderr END ====
[2024-06-27 02:47:20] 2024-06-27 00:47:20,397 [wrapper] apfmon messages muted
[2024-06-27 02:47:20]  *** Error codes and diagnostics ***
[2024-06-27 02:47:20]     "exeErrorCode": 0,
[2024-06-27 02:47:20]     "exeErrorDiag": "",
[2024-06-27 02:47:20]     "pilotErrorCode": 0,
[2024-06-27 02:47:20]     "pilotErrorDiag": "",
[2024-06-27 02:47:20]  *** Listing of results directory ***
[2024-06-27 02:47:20] total 660020
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 02:47:20] -rwx------ 1 boinc boinc     32220 Jun 26 20:01 runpilot2-wrapper.sh
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc      5654 Jun 26 20:01 queuedata.json
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc       100 Jun 27 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 02:47:20] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 00:54 run_atlas
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc       105 Jun 27 00:54 job.xml
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc 496793617 Jun 27 00:54 EVNT.40092557._000003.pool.root.1
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc     17537 Jun 27 00:54 start_atlas.sh
[2024-06-27 02:47:20] drwxrwx--x 2 boinc boinc      4096 Jun 27 00:54 shared
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc    482499 Jun 27 00:54 input.tar.gz
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc      6454 Jun 27 00:54 init_data.xml
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc         0 Jun 27 00:54 boinc_lockfile
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc      2629 Jun 27 00:54 pandaJob.out
[2024-06-27 02:47:20] -rw------- 1 boinc boinc       424 Jun 27 00:54 setup.sh.local
[2024-06-27 02:47:20] -rw------- 1 boinc boinc   1034711 Jun 27 00:54 agis_schedconf.cvmfs.json
[2024-06-27 02:47:20] -rw------- 1 boinc boinc         0 Jun 27 00:54 agis_ddmendpoints.agis.ALL.json
[2024-06-27 02:47:20] -rw------- 1 boinc boinc   1321363 Jun 27 00:54 cric_ddmendpoints.json
[2024-06-27 02:47:20] drwx------ 4 boinc boinc      4096 Jun 27 00:54 pilot3
[2024-06-27 02:47:20] -rw------- 1 boinc boinc 173633173 Jun 27 02:46 HITS.40092559._000073.pool.root.1
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc       530 Jun 27 02:46 boinc_task_state.xml
[2024-06-27 02:47:20] -rw------- 1 boinc boinc      1037 Jun 27 02:46 memory_monitor_summary.json
[2024-06-27 02:47:20] -rw------- 1 boinc boinc    273808 Jun 27 02:46 log.40092559._000073.job.log.tgz.1
[2024-06-27 02:47:20] -rw------- 1 boinc boinc        95 Jun 27 02:46 pilot_heartbeat.json
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc        27 Jun 27 02:46 wrapper_checkpoint.txt
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc      8192 Jun 27 02:46 boinc_mmap_file
[2024-06-27 02:47:20] -rw------- 1 boinc boinc      7739 Jun 27 02:47 heartbeat.json
[2024-06-27 02:47:20] -rw------- 1 boinc boinc      4417 Jun 27 02:47 pilotlog.txt
[2024-06-27 02:47:20] -rw------- 1 boinc boinc    673414 Jun 27 02:47 log.40092559._000073.job.log.1
[2024-06-27 02:47:20] -rw------- 1 boinc boinc       357 Jun 27 02:47 output.list
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc       620 Jun 27 02:47 runtime_log
[2024-06-27 02:47:20] -rw------- 1 boinc boinc    962560 Jun 27 02:47 result.tar.gz
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc     11409 Jun 27 02:47 runtime_log.err
[2024-06-27 02:47:20] -rw------- 1 boinc boinc       654 Jun 27 02:47 VKyKDmO8lg5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm89YKDmHjtGrn.diag
[2024-06-27 02:47:20] -rw-r--r-- 1 boinc boinc     21376 Jun 27 02:47 stderr.txt
[2024-06-27 02:47:20] HITS file was successfully produced:
[2024-06-27 02:47:20] -rw------- 1 boinc boinc 173633173 Jun 27 02:46 shared/HITS.pool.root.1
[2024-06-27 02:47:20]  *** Contents of shared directory: ***
[2024-06-27 02:47:20] total 656156
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc 496793617 Jun 27 00:54 ATLAS.root_0
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc     17537 Jun 27 00:54 start_atlas.sh
[2024-06-27 02:47:20] -rw-r--r-- 2 boinc boinc    482499 Jun 27 00:54 input.tar.gz
[2024-06-27 02:47:20] -rw------- 1 boinc boinc 173633173 Jun 27 02:46 HITS.pool.root.1
[2024-06-27 02:47:20] -rw------- 1 boinc boinc    962560 Jun 27 02:47 result.tar.gz
02:47:22 (2813678): run_atlas exited; CPU time 23870.957318
02:47:22 (2813678): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN