Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:46:00 (3021123): wrapper (7.7.26015): starting
04:46:00 (3021123): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 04:46:00] Arguments: --nthreads 4
[2024-06-27 04:46:00] Threads: 4
[2024-06-27 04:46:00] Checking for CVMFS
[2024-06-27 04:46:00] No cvmfs_config command found, will try listing directly
[2024-06-27 04:46:00] CVMFS is ok
[2024-06-27 04:46:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 04:46:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 04:46:00] Further information can be found at the LHC@home message board.
[2024-06-27 04:46:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 04:46:00] Checking for apptainer binary...
[2024-06-27 04:46:00] which: no apptainer in ((null))
[2024-06-27 04:46:00] apptainer is not installed, using version from CVMFS
[2024-06-27 04:46:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 04:46:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-06-27 04:46:01] apptainer works
[2024-06-27 04:46:01] Set ATHENA_PROC_NUMBER=4
[2024-06-27 04:46:01] Set ATHENA_CORE_NUMBER=4
[2024-06-27 04:46:01] Starting ATLAS job with PandaID=6245281406
[2024-06-27 04:46:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 06:44:53]  *** The last 200 lines of the pilot log: ***
[2024-06-27 06:44:53] 2024-06-27 04:44:38,561 | INFO     | intersect: 45631377397.18282
[2024-06-27 06:44:53] 2024-06-27 04:44:38,561 | INFO     | chi2: 0.09342164317005508
[2024-06-27 06:44:53] 2024-06-27 04:44:38,561 | INFO     | current chi2=0.09342164317005508 (change=34.1923606470077 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,561 | INFO     | model: linear, x: [1719457612.0, 1719457673.0, 1719457734.0, 1719457795.0, 1719457856.0, 1719457917.0, 1719457978.0, 1719458039.0, 1719458100.0, 1719458161.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,561 | INFO     | sum of square deviations: 274312120.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | sum of deviations: -4899374728.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | mean x: 1719460509.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | mean y: 2375263.2395833335
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | -- intersect: 30712944547.95815
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | intersect: 30712944547.95815
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | chi2: 0.07001770407590231
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | current chi2=0.07001770407590231 (change=25.051945459309316 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | model: linear, x: [1719457917.0, 1719457978.0, 1719458039.0, 1719458100.0, 1719458161.0, 1719458222.0, 1719458283.0, 1719458344.0, 1719458405.0, 1719458466.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,562 | INFO     | sum of square deviations: 233641590.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | sum of deviations: -1160342000.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | mean x: 1719460662.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | mean y: 2361228.967032967
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | -- intersect: 8541775908.803804
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | intersect: 8541775908.803804
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | chi2: 0.025998504826028824
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | current chi2=0.025998504826028824 (change=62.86866990404987 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | model: linear, x: [1719458222.0, 1719458283.0, 1719458344.0, 1719458405.0, 1719458466.0, 1719458527.0, 1719458588.0, 1719458649.0, 1719458710.0, 1719458771.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,563 | INFO     | sum of square deviations: 197203697.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | sum of deviations: 201888802.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | mean x: 1719460814.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | mean y: 2355747.430232558
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | -- intersect: -1757955490.0661113
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | intersect: -1757955490.0661113
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | chi2: 0.00018788031360951853
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | current chi2=0.00018788031360951853 (change=99.27734185151517 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | model: linear, x: [1719458527.0, 1719458588.0, 1719458649.0, 1719458710.0, 1719458771.0, 1719458832.0, 1719458893.0, 1719458954.0, 1719459015.0, 1719459076.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,564 | INFO     | sum of square deviations: 164765880.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | sum of deviations: 42759901.999999955
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | mean x: 1719460967.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | mean y: 2356489.234567901
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | -- intersect: -443876568.4940417
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | intersect: -443876568.4940417
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | chi2: 7.197340401968238e-05
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | current chi2=7.197340401968238e-05 (change=61.69188637332783 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,565 | INFO     | model: linear, x: [1719458832.0, 1719458893.0, 1719458954.0, 1719459015.0, 1719459076.0, 1719459137.0, 1719459198.0, 1719459259.0, 1719459320.0, 1719459381.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | sum of square deviations: 136095575.0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | sum of deviations: -21260848.499999996
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | mean x: 1719461119.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | mean y: 2356827.486842105
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | -- intersect: 270971015.44504637
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | intersect: 270971015.44504637
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | chi2: 4.6510161285067563e-05
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | current chi2=4.6510161285067563e-05 (change=35.37868339206445 %)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,566 | INFO     | left removable region not found
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | model: linear, x: [1719456392.0, 1719456453.0, 1719456514.0, 1719456575.0, 1719456636.0, 1719456697.0, 1719456758.0, 1719456819.0, 1719456880.0, 1719456941.0, 1719
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | sum of square deviations: 412686807.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | sum of deviations: 31123890218.500008
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | mean x: 1719459716.5
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | mean y: 2274628.7363636363
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | -- intersect: -129675424001.0633
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | intersect: -129675424001.0633
[2024-06-27 06:44:53] 2024-06-27 04:44:38,567 | INFO     | chi2: 3.4981184179348572
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | -- intersect: -129675424001.0633
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | current memory leak: 75.42 B/s (using 110 data points, chi2=3.50)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | ..............................
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . Timing measurements:
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . get job = 0 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . initial setup = 1 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . payload setup = 5 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . stage-in = 0 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . payload execution = 7076 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . stage-out = 0 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,568 | INFO     | . log creation = 0 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,569 | INFO     | ..............................
[2024-06-27 06:44:53] 2024-06-27 04:44:38,632 | INFO     | 
[2024-06-27 06:44:53] 2024-06-27 04:44:38,632 | INFO     | job summary report
[2024-06-27 06:44:53] 2024-06-27 04:44:38,632 | INFO     | --------------------------------------------------
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | PanDA job id: 6245281406
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | task id: 40092559
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | errors: (none)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | pilot state: finished 
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | transexitcode: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | exeerrorcode: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | exeerrordiag: 
[2024-06-27 06:44:53] 2024-06-27 04:44:38,633 | INFO     | exitcode: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | exitmsg: OK
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | cpuconsumptiontime: 25583 s
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | nevents: 400
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | neventsw: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | pid: 3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | pgrp: 3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | corecount: 4
[2024-06-27 06:44:53] 2024-06-27 04:44:38,634 | INFO     | event service: False
[2024-06-27 06:44:53] 2024-06-27 04:44:38,635 | INFO     | sizes: {0: 2387066, 4: 2387272, 11: 2387300, 7085: 2414579, 7086: 2423561, 7089: 2423617, 7095: 2423915}
[2024-06-27 06:44:53] 2024-06-27 04:44:38,635 | INFO     | --------------------------------------------------
[2024-06-27 06:44:53] 2024-06-27 04:44:38,635 | INFO     | 
[2024-06-27 06:44:53] 2024-06-27 04:44:38,635 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-06-27 06:44:53] 2024-06-27 04:44:38,658 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,658 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,658 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,658 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,658 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,659 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 06:44:53] 2024-06-27 04:44:38,660 | INFO     | job 6245281406 has completed (purged errors)
[2024-06-27 06:44:53] 2024-06-27 04:44:38,661 | INFO     | overall cleanup function is called
[2024-06-27 06:44:53] 2024-06-27 04:44:39,668 | INFO     | --- collectZombieJob: --- 10, [3031698]
[2024-06-27 06:44:53] 2024-06-27 04:44:39,669 | INFO     | zombie collector waiting for pid 3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:39,669 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 06:44:53] 2024-06-27 04:44:40,675 | INFO     | collected zombie processes
[2024-06-27 06:44:53] 2024-06-27 04:44:40,675 | INFO     | will now attempt to kill all subprocesses of pid=3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:40,769 | INFO     | process IDs to be killed: [3031698] (in reverse order)
[2024-06-27 06:44:53] 2024-06-27 04:44:40,830 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 06:44:53] 2024-06-27 04:44:40,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 06:44:53] 2024-06-27 04:44:40,835 | INFO     | did not find any defunct processes belonging to 3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:40,839 | INFO     | did not find any defunct processes belonging to 3031698
[2024-06-27 06:44:53] 2024-06-27 04:44:40,839 | INFO     | ready for new job
[2024-06-27 06:44:53] 2024-06-27 04:44:40,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 06:44:53] 2024-06-27 04:44:40,841 | INFO     | *************************************
[2024-06-27 06:44:53] 2024-06-27 04:44:40,841 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 06:44:53] 2024-06-27 04:44:40,841 | INFO     | *************************************
[2024-06-27 06:44:53] 2024-06-27 04:44:40,841 | INFO     | 
[2024-06-27 06:44:53] 2024-06-27 04:44:40,844 | INFO     | architecture information:
[2024-06-27 06:44:53] 2024-06-27 04:44:40,844 | INFO     | executing command: cat /etc/os-release
[2024-06-27 06:44:53] 2024-06-27 04:44:40,856 | INFO     | cat /etc/os-release:
[2024-06-27 06:44:53] NAME="CentOS Linux"
[2024-06-27 06:44:53] VERSION="7 (Core)"
[2024-06-27 06:44:53] ID="centos"
[2024-06-27 06:44:53] ID_LIKE="rhel fedora"
[2024-06-27 06:44:53] VERSION_ID="7"
[2024-06-27 06:44:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 06:44:53] ANSI_COLOR="0;31"
[2024-06-27 06:44:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 06:44:53] HOME_URL="https://www.centos.org/"
[2024-06-27 06:44:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 06:44:53] 
[2024-06-27 06:44:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 06:44:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 06:44:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 06:44:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 06:44:53] 
[2024-06-27 06:44:53] 2024-06-27 04:44:40,857 | INFO     | *************************************
[2024-06-27 06:44:53] 2024-06-27 04:44:41,360 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-06-27 06:44:53] 2024-06-27 04:44:41,378 | INFO     | sufficient remaining disk space (1702283444224 B)
[2024-06-27 06:44:53] 2024-06-27 04:44:41,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 06:44:53] 2024-06-27 04:44:41,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 06:44:53] 2024-06-27 04:44:41,379 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 06:44:53] 2024-06-27 04:44:41,380 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 06:44:53] 2024-06-27 04:44:41,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 06:44:53] 2024-06-27 04:44:41,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 06:44:53] 2024-06-27 04:44:41,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 06:44:53] 2024-06-27 04:44:41,673 | INFO     | aborting loop
[2024-06-27 06:44:53] 2024-06-27 04:44:41,910 | INFO     | all data control threads have been joined
[2024-06-27 06:44:53] 2024-06-27 04:44:42,210 | INFO     | all job control threads have been joined
[2024-06-27 06:44:53] 2024-06-27 04:44:42,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 06:44:53] 2024-06-27 04:44:42,385 | INFO     | [job] retrieve thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,479 | INFO     | [payload] validate_post thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,511 | INFO     | all payload control threads have been joined
[2024-06-27 06:44:53] 2024-06-27 04:44:42,550 | INFO     | [job] validate thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,678 | INFO     | [job] job monitor thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,785 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,915 | INFO     | [data] control thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:42,958 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,062 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,094 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,131 | INFO     | [payload] failed_post thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,216 | INFO     | [job] control thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 06:44:53] 2024-06-27 04:44:43,338 | INFO     | [data] copytool_in thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,516 | INFO     | [payload] control thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:43,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 06:44:53] 2024-06-27 04:44:44,364 | INFO     | [data] copytool_out thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:44,648 | INFO     | [job] queue monitor thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:47,335 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 06:44:53] 2024-06-27 04:44:47,849 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47587685651520)>', '<ExcThread(monitor, started 47587865925376)>']
[2024-06-27 06:44:53] 2024-06-27 04:44:48,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 06:44:53] 2024-06-27 04:44:48,416 | INFO     | [monitor] control thread has ended
[2024-06-27 06:44:53] 2024-06-27 04:44:52,875 | INFO     | all workflow threads have been joined
[2024-06-27 06:44:53] 2024-06-27 04:44:52,875 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 06:44:53] 2024-06-27 04:44:52,875 | INFO     | traces error code: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:52,876 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 06:44:53] 2024-06-27 04:44:52,969 [wrapper] ==== pilot stdout END ====
[2024-06-27 06:44:53] 2024-06-27 04:44:52,972 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 06:44:53] 2024-06-27 04:44:52,975 [wrapper] pilotpid: 3024782
[2024-06-27 06:44:53] 2024-06-27 04:44:52,978 [wrapper] Pilot exit status: 0
[2024-06-27 06:44:53] 2024-06-27 04:44:52,988 [wrapper] pandaids: 6245281406
[2024-06-27 06:44:53] 2024-06-27 04:44:53,029 [wrapper] cleanup supervisor_pilot 3123758 3024783
[2024-06-27 06:44:53] 2024-06-27 04:44:53,032 [wrapper] Test setup, not cleaning
[2024-06-27 06:44:53] 2024-06-27 04:44:53,035 [wrapper] ==== wrapper stdout END ====
[2024-06-27 06:44:53] 2024-06-27 04:44:53,038 [wrapper] ==== wrapper stderr END ====
[2024-06-27 06:44:53] 2024-06-27 04:44:53,044 [wrapper] apfmon messages muted
[2024-06-27 06:44:53]  *** Error codes and diagnostics ***
[2024-06-27 06:44:53]     "exeErrorCode": 0,
[2024-06-27 06:44:53]     "exeErrorDiag": "",
[2024-06-27 06:44:53]     "pilotErrorCode": 0,
[2024-06-27 06:44:53]     "pilotErrorDiag": "",
[2024-06-27 06:44:53]  *** Listing of results directory ***
[2024-06-27 06:44:53] total 668104
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 06:44:53] -rwx------ 1 boinc boinc     32220 Jun 26 20:01 runpilot2-wrapper.sh
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc      5654 Jun 26 20:01 queuedata.json
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc       100 Jun 27 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 06:44:53] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 04:45 run_atlas
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc       105 Jun 27 04:45 job.xml
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc      6454 Jun 27 04:46 init_data.xml
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc 496793617 Jun 27 04:46 EVNT.40092557._000003.pool.root.1
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc     17537 Jun 27 04:46 start_atlas.sh
[2024-06-27 06:44:53] drwxrwx--x 2 boinc boinc      4096 Jun 27 04:46 shared
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc    482503 Jun 27 04:46 input.tar.gz
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc         0 Jun 27 04:46 boinc_lockfile
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc      2629 Jun 27 04:46 pandaJob.out
[2024-06-27 06:44:53] -rw------- 1 boinc boinc       424 Jun 27 04:46 setup.sh.local
[2024-06-27 06:44:53] -rw------- 1 boinc boinc   1034735 Jun 27 04:46 agis_schedconf.cvmfs.json
[2024-06-27 06:44:53] -rw------- 1 boinc boinc         0 Jun 27 04:46 agis_ddmendpoints.agis.ALL.json
[2024-06-27 06:44:53] -rw------- 1 boinc boinc   1321363 Jun 27 04:46 cric_ddmendpoints.json
[2024-06-27 06:44:53] drwx------ 4 boinc boinc      4096 Jun 27 04:46 pilot3
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc       530 Jun 27 06:43 boinc_task_state.xml
[2024-06-27 06:44:53] -rw------- 1 boinc boinc 181853978 Jun 27 06:44 HITS.40092559._000058.pool.root.1
[2024-06-27 06:44:53] -rw------- 1 boinc boinc        95 Jun 27 06:44 pilot_heartbeat.json
[2024-06-27 06:44:53] -rw------- 1 boinc boinc      1038 Jun 27 06:44 memory_monitor_summary.json
[2024-06-27 06:44:53] -rw------- 1 boinc boinc    258328 Jun 27 06:44 log.40092559._000058.job.log.tgz.1
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc      8192 Jun 27 06:44 boinc_mmap_file
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc        27 Jun 27 06:44 wrapper_checkpoint.txt
[2024-06-27 06:44:53] -rw------- 1 boinc boinc      7751 Jun 27 06:44 heartbeat.json
[2024-06-27 06:44:53] -rw------- 1 boinc boinc      4345 Jun 27 06:44 pilotlog.txt
[2024-06-27 06:44:53] -rw------- 1 boinc boinc    711936 Jun 27 06:44 log.40092559._000058.job.log.1
[2024-06-27 06:44:53] -rw------- 1 boinc boinc       357 Jun 27 06:44 output.list
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc       620 Jun 27 06:44 runtime_log
[2024-06-27 06:44:53] -rw------- 1 boinc boinc    993280 Jun 27 06:44 result.tar.gz
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc     11409 Jun 27 06:44 runtime_log.err
[2024-06-27 06:44:53] -rw------- 1 boinc boinc       654 Jun 27 06:44 HjjKDmO8lg5n9Rq4apOajLDm4fhM0noT9bVo2ijZDm19YKDm0MfJdn.diag
[2024-06-27 06:44:53] -rw-r--r-- 1 boinc boinc     21378 Jun 27 06:44 stderr.txt
[2024-06-27 06:44:53] HITS file was successfully produced:
[2024-06-27 06:44:53] -rw------- 1 boinc boinc 181853978 Jun 27 06:44 shared/HITS.pool.root.1
[2024-06-27 06:44:53]  *** Contents of shared directory: ***
[2024-06-27 06:44:53] total 664216
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc 496793617 Jun 27 04:46 ATLAS.root_0
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc     17537 Jun 27 04:46 start_atlas.sh
[2024-06-27 06:44:53] -rw-r--r-- 2 boinc boinc    482503 Jun 27 04:46 input.tar.gz
[2024-06-27 06:44:53] -rw------- 1 boinc boinc 181853978 Jun 27 06:44 HITS.pool.root.1
[2024-06-27 06:44:53] -rw------- 1 boinc boinc    993280 Jun 27 06:44 result.tar.gz
06:44:54 (3021123): run_atlas exited; CPU time 25511.180152
06:44:54 (3021123): called boinc_finish(0)

</stderr_txt>
]]>

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