Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:02:52 (165180): wrapper (7.7.26015): starting
22:02:52 (165180): wrapper: running run_atlas (--nthreads 4)
[2024-06-26 22:02:52] Arguments: --nthreads 4
[2024-06-26 22:02:52] Threads: 4
[2024-06-26 22:02:52] Checking for CVMFS
[2024-06-26 22:02:52] No cvmfs_config command found, will try listing directly
[2024-06-26 22:02:52] CVMFS is ok
[2024-06-26 22:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 22:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 22:02:52] Further information can be found at the LHC@home message board.
[2024-06-26 22:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 22:02:52] Checking for apptainer binary...
[2024-06-26 22:02:52] which: no apptainer in ((null))
[2024-06-26 22:02:52] apptainer is not installed, using version from CVMFS
[2024-06-26 22:02:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 22:02:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-26 22:02:52] apptainer works
[2024-06-26 22:02:52] Set ATHENA_PROC_NUMBER=4
[2024-06-26 22:02:52] Set ATHENA_CORE_NUMBER=4
[2024-06-26 22:02:53] Starting ATLAS job with PandaID=6245276896
[2024-06-26 22:02:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 23:56:39]  *** The last 200 lines of the pilot log: ***
[2024-06-26 23:56:39] 2024-06-26 21:56:23,529 | INFO     | chi2: 3.318100806513251
[2024-06-26 23:56:39] 2024-06-26 21:56:23,529 | INFO     | model: linear, x: [1719432205.0, 1719432266.0, 1719432327.0, 1719432388.0, 1719432449.0, 1719432510.0, 1719432571.0, 1719432632.0, 1719432693.0, 1719432754.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,530 | INFO     | sum of square deviations: 369281342.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,530 | INFO     | sum of deviations: 38806673291.99999
[2024-06-26 23:56:39] 2024-06-26 21:56:23,530 | INFO     | mean x: 1719435407.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,530 | INFO     | mean y: 2265222.452830189
[2024-06-26 23:56:39] 2024-06-26 21:56:23,531 | INFO     | -- intersect: -180688066040.49033
[2024-06-26 23:56:39] 2024-06-26 21:56:23,531 | INFO     | intersect: -180688066040.49033
[2024-06-26 23:56:39] 2024-06-26 21:56:23,531 | INFO     | chi2: 3.29679726026412
[2024-06-26 23:56:39] 2024-06-26 21:56:23,531 | INFO     | current chi2=3.29679726026412 (change=0.642040356559199 %)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,531 | INFO     | right removable region: 105
[2024-06-26 23:56:39] 2024-06-26 21:56:23,532 | INFO     | model: linear, x: [1719432510.0, 1719432571.0, 1719432632.0, 1719432693.0, 1719432754.0, 1719432815.0, 1719432876.0, 1719432937.0, 1719432998.0, 1719433059.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,532 | INFO     | sum of square deviations: 369281342.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,532 | INFO     | sum of deviations: 17112048881.499994
[2024-06-26 23:56:39] 2024-06-26 21:56:23,533 | INFO     | mean x: 1719435712.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,533 | INFO     | mean y: 2334411.216981132
[2024-06-26 23:56:39] 2024-06-26 21:56:23,533 | INFO     | -- intersect: -79674228075.54546
[2024-06-26 23:56:39] 2024-06-26 21:56:23,533 | INFO     | intersect: -79674228075.54546
[2024-06-26 23:56:39] 2024-06-26 21:56:23,533 | INFO     | chi2: 1.1747245363944716
[2024-06-26 23:56:39] 2024-06-26 21:56:23,534 | INFO     | current chi2=1.1747245363944716 (change=64.59647838038703 %)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,534 | INFO     | model: linear, x: [1719432815.0, 1719432876.0, 1719432937.0, 1719432998.0, 1719433059.0, 1719433120.0, 1719433181.0, 1719433242.0, 1719433303.0, 1719433364.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,534 | INFO     | sum of square deviations: 319447850.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | sum of deviations: 230412859.9999997
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | mean x: 1719435865.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | mean y: 2386097.1386138615
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | -- intersect: -1237816756.758269
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | intersect: -1237816756.758269
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | chi2: 0.14602946501662586
[2024-06-26 23:56:39] 2024-06-26 21:56:23,535 | INFO     | current chi2=0.14602946501662586 (change=87.56904614720763 %)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,536 | INFO     | model: linear, x: [1719433120.0, 1719433181.0, 1719433242.0, 1719433303.0, 1719433364.0, 1719433425.0, 1719433486.0, 1719433547.0, 1719433608.0, 1719433669.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,536 | INFO     | sum of square deviations: 274312120.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,536 | INFO     | sum of deviations: -4038487645.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | mean x: 1719436017.5
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | mean y: 2400164.59375
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | -- intersect: 25316342231.39514
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | intersect: 25316342231.39514
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | chi2: 0.007617692778008657
[2024-06-26 23:56:39] 2024-06-26 21:56:23,537 | INFO     | current chi2=0.007617692778008657 (change=94.78345498482696 %)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,538 | INFO     | model: linear, x: [1719433425.0, 1719433486.0, 1719433547.0, 1719433608.0, 1719433669.0, 1719433730.0, 1719433791.0, 1719433852.0, 1719433913.0, 1719433974.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,538 | INFO     | sum of square deviations: 233641590.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,538 | INFO     | sum of deviations: -3973477658.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,538 | INFO     | mean x: 1719436170.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,538 | INFO     | mean y: 2399904.681318681
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | -- intersect: 29244373501.300354
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | intersect: 29244373501.300354
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | chi2: 0.00610479193915469
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | current chi2=0.00610479193915469 (change=19.860355135632748 %)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | left removable region: 40
[2024-06-26 23:56:39] 2024-06-26 21:56:23,539 | INFO     | model: linear, x: [1719434645.0, 1719434706.0, 1719434767.0, 1719434828.0, 1719434889.0, 1719434950.0, 1719435011.0, 1719435072.0, 1719435133.0, 1719435194.0, 1719
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | sum of square deviations: 85136480.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | sum of deviations: -2142350195.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | mean x: 1719436597.0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | mean y: 2394276.369230769
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | -- intersect: 43269808302.331856
[2024-06-26 23:56:39] 2024-06-26 21:56:23,540 | INFO     | intersect: 43269808302.331856
[2024-06-26 23:56:39] 2024-06-26 21:56:23,541 | INFO     | chi2: 0.004226990150044124
[2024-06-26 23:56:39] 2024-06-26 21:56:23,541 | INFO     | -- intersect: 43269808302.331856
[2024-06-26 23:56:39] 2024-06-26 21:56:23,541 | INFO     | current memory leak: -25.16 B/s (using 65 data points, chi2=0.00)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | ..............................
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . Timing measurements:
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . get job = 0 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . initial setup = 1 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . payload setup = 6 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . stage-in = 0 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . payload execution = 6765 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,542 | INFO     | . stage-out = 0 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,543 | INFO     | . log creation = 0 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,543 | INFO     | ..............................
[2024-06-26 23:56:39] 2024-06-26 21:56:23,626 | WARNING  | process 175865 is no longer using CPU - aborting
[2024-06-26 23:56:39] 2024-06-26 21:56:23,626 | INFO     | aborting job monitoring since job object (job id=6245276896) has expired
[2024-06-26 23:56:39] 2024-06-26 21:56:23,958 | INFO     | 
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | job summary report
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | --------------------------------------------------
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | PanDA job id: 6245276896
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | task id: 40092568
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | errors: (none)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,959 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | pilot state: finished 
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | transexitcode: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | exeerrorcode: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | exeerrordiag: 
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | exitcode: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | exitmsg: OK
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | cpuconsumptiontime: 24007 s
[2024-06-26 23:56:39] 2024-06-26 21:56:23,960 | INFO     | nevents: 400
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | neventsw: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | pid: 175865
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | pgrp: 175865
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | corecount: 4
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | event service: False
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | sizes: {0: 2385546, 1: 2387093, 5: 2387299, 12: 2387355, 6774: 2414543, 6777: 2423709, 6787: 2423823}
[2024-06-26 23:56:39] 2024-06-26 21:56:23,961 | INFO     | --------------------------------------------------
[2024-06-26 23:56:39] 2024-06-26 21:56:23,962 | INFO     | 
[2024-06-26 23:56:39] 2024-06-26 21:56:23,962 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-26 23:56:39] 2024-06-26 21:56:23,987 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,987 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,987 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | job 6245276896 has completed (purged errors)
[2024-06-26 23:56:39] 2024-06-26 21:56:23,990 | INFO     | overall cleanup function is called
[2024-06-26 23:56:39] 2024-06-26 21:56:24,998 | INFO     | --- collectZombieJob: --- 10, [175865]
[2024-06-26 23:56:39] 2024-06-26 21:56:24,998 | INFO     | zombie collector waiting for pid 175865
[2024-06-26 23:56:39] 2024-06-26 21:56:24,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 23:56:39] 2024-06-26 21:56:26,003 | INFO     | collected zombie processes
[2024-06-26 23:56:39] 2024-06-26 21:56:26,004 | INFO     | will now attempt to kill all subprocesses of pid=175865
[2024-06-26 23:56:39] 2024-06-26 21:56:26,113 | INFO     | process IDs to be killed: [175865] (in reverse order)
[2024-06-26 23:56:39] 2024-06-26 21:56:26,183 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 23:56:39] 2024-06-26 21:56:26,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 23:56:39] 2024-06-26 21:56:26,187 | INFO     | did not find any defunct processes belonging to 175865
[2024-06-26 23:56:39] 2024-06-26 21:56:26,191 | INFO     | did not find any defunct processes belonging to 175865
[2024-06-26 23:56:39] 2024-06-26 21:56:26,191 | INFO     | ready for new job
[2024-06-26 23:56:39] 2024-06-26 21:56:26,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 23:56:39] 2024-06-26 21:56:26,193 | INFO     | *************************************
[2024-06-26 23:56:39] 2024-06-26 21:56:26,193 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 23:56:39] 2024-06-26 21:56:26,193 | INFO     | *************************************
[2024-06-26 23:56:39] 2024-06-26 21:56:26,193 | INFO     | 
[2024-06-26 23:56:39] 2024-06-26 21:56:26,196 | INFO     | architecture information:
[2024-06-26 23:56:39] 2024-06-26 21:56:26,196 | INFO     | executing command: cat /etc/os-release
[2024-06-26 23:56:39] 2024-06-26 21:56:26,212 | INFO     | cat /etc/os-release:
[2024-06-26 23:56:39] NAME="CentOS Linux"
[2024-06-26 23:56:39] VERSION="7 (Core)"
[2024-06-26 23:56:39] ID="centos"
[2024-06-26 23:56:39] ID_LIKE="rhel fedora"
[2024-06-26 23:56:39] VERSION_ID="7"
[2024-06-26 23:56:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 23:56:39] ANSI_COLOR="0;31"
[2024-06-26 23:56:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 23:56:39] HOME_URL="https://www.centos.org/"
[2024-06-26 23:56:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 23:56:39] 
[2024-06-26 23:56:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 23:56:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 23:56:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 23:56:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 23:56:39] 
[2024-06-26 23:56:39] 2024-06-26 21:56:26,212 | INFO     | *************************************
[2024-06-26 23:56:39] 2024-06-26 21:56:26,715 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-26 23:56:39] 2024-06-26 21:56:26,739 | INFO     | sufficient remaining disk space (1674648223744 B)
[2024-06-26 23:56:39] 2024-06-26 21:56:26,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 23:56:39] 2024-06-26 21:56:26,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 23:56:39] 2024-06-26 21:56:26,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 23:56:39] 2024-06-26 21:56:26,747 | INFO     | all job control threads have been joined
[2024-06-26 23:56:39] 2024-06-26 21:56:27,016 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 23:56:39] 2024-06-26 21:56:27,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 23:56:39] 2024-06-26 21:56:27,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 23:56:39] 2024-06-26 21:56:27,034 | INFO     | all data control threads have been joined
[2024-06-26 23:56:39] 2024-06-26 21:56:27,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 23:56:39] 2024-06-26 21:56:27,135 | INFO     | aborting loop
[2024-06-26 23:56:39] 2024-06-26 21:56:27,443 | INFO     | all payload control threads have been joined
[2024-06-26 23:56:39] 2024-06-26 21:56:27,745 | INFO     | [job] retrieve thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:27,753 | INFO     | [job] control thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:27,760 | INFO     | [data] copytool_in thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,034 | INFO     | [job] validate thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,039 | INFO     | [data] control thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,140 | INFO     | [job] job monitor thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,181 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,182 | INFO     | [payload] validate_post thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,426 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,449 | INFO     | [payload] control thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,600 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 23:56:39] 2024-06-26 21:56:28,746 | INFO     | [data] copytool_out thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:28,747 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:29,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 23:56:39] 2024-06-26 21:56:29,181 | INFO     | [payload] failed_post thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:29,637 | INFO     | [job] queue monitor thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:33,048 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 23:56:39] 2024-06-26 21:56:33,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47976046826560)>', '<ExcThread(monitor, started 47976227100416)>']
[2024-06-26 23:56:39] 2024-06-26 21:56:34,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 23:56:39] 2024-06-26 21:56:34,053 | INFO     | [monitor] control thread has ended
[2024-06-26 23:56:39] 2024-06-26 21:56:38,885 | INFO     | all workflow threads have been joined
[2024-06-26 23:56:39] 2024-06-26 21:56:38,886 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 23:56:39] 2024-06-26 21:56:38,886 | INFO     | traces error code: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:38,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 23:56:39] 2024-06-26 21:56:39,019 [wrapper] ==== pilot stdout END ====
[2024-06-26 23:56:39] 2024-06-26 21:56:39,023 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 23:56:39] 2024-06-26 21:56:39,027 [wrapper] pilotpid: 168851
[2024-06-26 23:56:39] 2024-06-26 21:56:39,030 [wrapper] Pilot exit status: 0
[2024-06-26 23:56:39] 2024-06-26 21:56:39,043 [wrapper] pandaids: 6245276896
[2024-06-26 23:56:39] 2024-06-26 21:56:39,103 [wrapper] cleanup supervisor_pilot  240168 168852
[2024-06-26 23:56:39] 2024-06-26 21:56:39,107 [wrapper] Test setup, not cleaning
[2024-06-26 23:56:39] 2024-06-26 21:56:39,111 [wrapper] ==== wrapper stdout END ====
[2024-06-26 23:56:39] 2024-06-26 21:56:39,114 [wrapper] ==== wrapper stderr END ====
[2024-06-26 23:56:39] 2024-06-26 21:56:39,121 [wrapper] apfmon messages muted
[2024-06-26 23:56:39]  *** Error codes and diagnostics ***
[2024-06-26 23:56:39]     "exeErrorCode": 0,
[2024-06-26 23:56:39]     "exeErrorDiag": "",
[2024-06-26 23:56:39]     "pilotErrorCode": 0,
[2024-06-26 23:56:39]     "pilotErrorDiag": "",
[2024-06-26 23:56:39]  *** Listing of results directory ***
[2024-06-26 23:56:39] total 663740
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc      5654 Jun 26 19:58 queuedata.json
[2024-06-26 23:56:39] -rwx------ 1 boinc boinc     32220 Jun 26 19:58 runpilot2-wrapper.sh
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc       100 Jun 26 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 23:56:39] -rwxr-xr-x 1 boinc boinc      7986 Jun 26 22:02 run_atlas
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc       105 Jun 26 22:02 job.xml
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc      6456 Jun 26 22:02 init_data.xml
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc 494471438 Jun 26 22:02 EVNT.40092566._000001.pool.root.1
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc     17537 Jun 26 22:02 start_atlas.sh
[2024-06-26 23:56:39] drwxrwx--x 2 boinc boinc      4096 Jun 26 22:02 shared
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc    482504 Jun 26 22:02 input.tar.gz
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc         0 Jun 26 22:02 boinc_lockfile
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc      2635 Jun 26 22:02 pandaJob.out
[2024-06-26 23:56:39] -rw------- 1 boinc boinc       424 Jun 26 22:02 setup.sh.local
[2024-06-26 23:56:39] -rw------- 1 boinc boinc   1034743 Jun 26 22:02 agis_schedconf.cvmfs.json
[2024-06-26 23:56:39] -rw------- 1 boinc boinc         0 Jun 26 22:03 agis_ddmendpoints.agis.ALL.json
[2024-06-26 23:56:39] -rw------- 1 boinc boinc   1321363 Jun 26 22:03 cric_ddmendpoints.json
[2024-06-26 23:56:39] drwx------ 4 boinc boinc      4096 Jun 26 22:03 pilot3
[2024-06-26 23:56:39] -rw------- 1 boinc boinc 179812365 Jun 26 23:55 HITS.40092568._000003.pool.root.1
[2024-06-26 23:56:39] -rw------- 1 boinc boinc      1051 Jun 26 23:56 memory_monitor_summary.json
[2024-06-26 23:56:39] -rw------- 1 boinc boinc    248198 Jun 26 23:56 log.40092568._000003.job.log.tgz.1
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc        27 Jun 26 23:56 wrapper_checkpoint.txt
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc      8192 Jun 26 23:56 boinc_mmap_file
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc       530 Jun 26 23:56 boinc_task_state.xml
[2024-06-26 23:56:39] -rw------- 1 boinc boinc        95 Jun 26 23:56 pilot_heartbeat.json
[2024-06-26 23:56:39] -rw------- 1 boinc boinc      7745 Jun 26 23:56 heartbeat.json
[2024-06-26 23:56:39] -rw------- 1 boinc boinc      4222 Jun 26 23:56 pilotlog.txt
[2024-06-26 23:56:39] -rw------- 1 boinc boinc    670313 Jun 26 23:56 log.40092568._000003.job.log.1
[2024-06-26 23:56:39] -rw------- 1 boinc boinc       357 Jun 26 23:56 output.list
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc       620 Jun 26 23:56 runtime_log
[2024-06-26 23:56:39] -rw------- 1 boinc boinc    942080 Jun 26 23:56 result.tar.gz
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc     11409 Jun 26 23:56 runtime_log.err
[2024-06-26 23:56:39] -rw------- 1 boinc boinc       654 Jun 26 23:56 DohKDmR5lg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm4coKDm9RKGen.diag
[2024-06-26 23:56:39] -rw-r--r-- 1 boinc boinc     21302 Jun 26 23:56 stderr.txt
[2024-06-26 23:56:39] HITS file was successfully produced:
[2024-06-26 23:56:39] -rw------- 1 boinc boinc 179812365 Jun 26 23:55 shared/HITS.pool.root.1
[2024-06-26 23:56:39]  *** Contents of shared directory: ***
[2024-06-26 23:56:39] total 659904
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc 494471438 Jun 26 22:02 ATLAS.root_0
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc     17537 Jun 26 22:02 start_atlas.sh
[2024-06-26 23:56:39] -rw-r--r-- 2 boinc boinc    482504 Jun 26 22:02 input.tar.gz
[2024-06-26 23:56:39] -rw------- 1 boinc boinc 179812365 Jun 26 23:55 HITS.pool.root.1
[2024-06-26 23:56:39] -rw------- 1 boinc boinc    942080 Jun 26 23:56 result.tar.gz
23:56:41 (165180): run_atlas exited; CPU time 23912.540163
23:56:41 (165180): called boinc_finish(0)

</stderr_txt>
]]>

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