Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:29 (665086): wrapper (7.7.26015): starting
09:41:29 (665086): wrapper: running run_atlas (--nthreads 4)
[2024-06-27 09:41:29] Arguments: --nthreads 4
[2024-06-27 09:41:29] Threads: 4
[2024-06-27 09:41:29] Checking for CVMFS
[2024-06-27 09:41:29] No cvmfs_config command found, will try listing directly
[2024-06-27 09:41:29] CVMFS is ok
[2024-06-27 09:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-27 09:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-27 09:41:29] Further information can be found at the LHC@home message board.
[2024-06-27 09:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-27 09:41:29] Checking for apptainer binary...
[2024-06-27 09:41:30] which: no apptainer in ((null))
[2024-06-27 09:41:30] apptainer is not installed, using version from CVMFS
[2024-06-27 09:41:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-27 09:41:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-06-27 09:41:30] apptainer works
[2024-06-27 09:41:30] Set ATHENA_PROC_NUMBER=4
[2024-06-27 09:41:30] Set ATHENA_CORE_NUMBER=4
[2024-06-27 09:41:30] Starting ATLAS job with PandaID=6245276967
[2024-06-27 09:41:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-27 11:35:09]  *** The last 200 lines of the pilot log: ***
[2024-06-27 11:35:09] 2024-06-27 09:34:56,399 | INFO     | chi2: 3.092629050735076
[2024-06-27 11:35:09] 2024-06-27 09:34:56,399 | INFO     | current chi2=3.092629050735076 (change=0.39181749450599895 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,399 | INFO     | right removable region: 105
[2024-06-27 11:35:09] 2024-06-27 09:34:56,400 | INFO     | model: linear, x: [1719474429.0, 1719474490.0, 1719474551.0, 1719474612.0, 1719474673.0, 1719474734.0, 1719474795.0, 1719474856.0, 1719474917.0, 1719474978.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,400 | INFO     | sum of square deviations: 369281342.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,400 | INFO     | sum of deviations: 18532775481.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | mean x: 1719477631.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | mean y: 2313837.4245283017
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | -- intersect: -86291493139.97751
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | intersect: -86291493139.97751
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | chi2: 1.0170031594845277
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | current chi2=1.0170031594845277 (change=67.24410375226839 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,401 | INFO     | model: linear, x: [1719474734.0, 1719474795.0, 1719474856.0, 1719474917.0, 1719474978.0, 1719475039.0, 1719475100.0, 1719475161.0, 1719475222.0, 1719475283.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,402 | INFO     | sum of square deviations: 319447850.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,402 | INFO     | sum of deviations: 2029760909.0000005
[2024-06-27 11:35:09] 2024-06-27 09:34:56,402 | INFO     | mean x: 1719477784.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,402 | INFO     | mean y: 2364363.881188119
[2024-06-27 11:35:09] 2024-06-27 09:34:56,402 | INFO     | -- intersect: -10923139720.297644
[2024-06-27 11:35:09] 2024-06-27 09:34:56,403 | INFO     | intersect: -10923139720.297644
[2024-06-27 11:35:09] 2024-06-27 09:34:56,403 | INFO     | chi2: 0.04669920878429093
[2024-06-27 11:35:09] 2024-06-27 09:34:56,403 | INFO     | current chi2=0.04669920878429093 (change=95.4081549945272 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,403 | INFO     | model: linear, x: [1719475039.0, 1719475100.0, 1719475161.0, 1719475222.0, 1719475283.0, 1719475344.0, 1719475405.0, 1719475466.0, 1719475527.0, 1719475588.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,403 | INFO     | sum of square deviations: 274312120.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,404 | INFO     | sum of deviations: 1985659708.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,404 | INFO     | mean x: 1719477936.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,404 | INFO     | mean y: 2364320.59375
[2024-06-27 11:35:09] 2024-06-27 09:34:56,404 | INFO     | -- intersect: -12444399089.50556
[2024-06-27 11:35:09] 2024-06-27 09:34:56,404 | INFO     | intersect: -12444399089.50556
[2024-06-27 11:35:09] 2024-06-27 09:34:56,405 | INFO     | chi2: 0.0008144525994128638
[2024-06-27 11:35:09] 2024-06-27 09:34:56,405 | INFO     | current chi2=0.0008144525994128638 (change=98.25596060272687 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,405 | INFO     | model: linear, x: [1719475344.0, 1719475405.0, 1719475466.0, 1719475527.0, 1719475588.0, 1719475649.0, 1719475710.0, 1719475771.0, 1719475832.0, 1719475893.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,405 | INFO     | sum of square deviations: 233641590.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | sum of deviations: 1477131348.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | mean x: 1719478089.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | mean y: 2366220.4395604394
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | -- intersect: -10868536462.002525
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | intersect: -10868536462.002525
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | chi2: 0.0005539913697196219
[2024-06-27 11:35:09] 2024-06-27 09:34:56,406 | INFO     | current chi2=0.0005539913697196219 (change=31.979912628556594 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,407 | INFO     | model: linear, x: [1719475649.0, 1719475710.0, 1719475771.0, 1719475832.0, 1719475893.0, 1719475954.0, 1719476015.0, 1719476076.0, 1719476137.0, 1719476198.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,407 | INFO     | sum of square deviations: 197203697.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,407 | INFO     | sum of deviations: 1145903147.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,407 | INFO     | mean x: 1719478241.5
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | mean y: 2367606.1279069767
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | -- intersect: -9989105951.271366
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | intersect: -9989105951.271366
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | chi2: 0.0004943255691405275
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | current chi2=0.0004943255691405275 (change=10.77016788353429 %)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | left removable region: 50
[2024-06-27 11:35:09] 2024-06-27 09:34:56,408 | INFO     | model: linear, x: [1719477174.0, 1719477235.0, 1719477296.0, 1719477357.0, 1719477418.0, 1719477479.0, 1719477540.0, 1719477601.0, 1719477662.0, 1719477723.0, 1719
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | sum of square deviations: 51573060.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | sum of deviations: 90417555.00000003
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | mean x: 1719478821.0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | mean y: 2373310.1454545455
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | -- intersect: -3012205829.9928794
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | intersect: -3012205829.9928794
[2024-06-27 11:35:09] 2024-06-27 09:34:56,409 | INFO     | chi2: 4.961206110935009e-06
[2024-06-27 11:35:09] 2024-06-27 09:34:56,410 | INFO     | -- intersect: -3012205829.9928794
[2024-06-27 11:35:09] 2024-06-27 09:34:56,410 | INFO     | current memory leak: 1.75 B/s (using 55 data points, chi2=0.00)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,410 | INFO     | ..............................
[2024-06-27 11:35:09] 2024-06-27 09:34:56,410 | INFO     | . Timing measurements:
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . get job = 0 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . initial setup = 1 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . payload setup = 5 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . stage-in = 0 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . payload execution = 6762 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . stage-out = 0 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | . log creation = 0 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,411 | INFO     | ..............................
[2024-06-27 11:35:09] 2024-06-27 09:34:56,489 | INFO     | 
[2024-06-27 11:35:09] 2024-06-27 09:34:56,489 | INFO     | job summary report
[2024-06-27 11:35:09] 2024-06-27 09:34:56,489 | INFO     | --------------------------------------------------
[2024-06-27 11:35:09] 2024-06-27 09:34:56,489 | INFO     | PanDA job id: 6245276967
[2024-06-27 11:35:09] 2024-06-27 09:34:56,489 | INFO     | task id: 40092568
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | errors: (none)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | pilot state: finished 
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | transexitcode: 0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | exeerrorcode: 0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | exeerrordiag: 
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | exitcode: 0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,490 | INFO     | exitmsg: OK
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | cpuconsumptiontime: 24228 s
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | nevents: 400
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | neventsw: 0
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | pid: 675614
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | pgrp: 675614
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | corecount: 4
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | event service: False
[2024-06-27 11:35:09] 2024-06-27 09:34:56,491 | INFO     | sizes: {0: 2387075, 4: 2387281, 11: 2387309, 6771: 2414474, 6772: 2423456, 6773: 2423512, 6781: 2423810}
[2024-06-27 11:35:09] 2024-06-27 09:34:56,492 | INFO     | --------------------------------------------------
[2024-06-27 11:35:09] 2024-06-27 09:34:56,492 | INFO     | 
[2024-06-27 11:35:09] 2024-06-27 09:34:56,492 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-06-27 11:35:09] 2024-06-27 09:34:56,515 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,515 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,515 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,515 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,517 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-27 11:35:09] 2024-06-27 09:34:56,518 | INFO     | job 6245276967 has completed (purged errors)
[2024-06-27 11:35:09] 2024-06-27 09:34:56,518 | INFO     | overall cleanup function is called
[2024-06-27 11:35:09] 2024-06-27 09:34:57,526 | INFO     | --- collectZombieJob: --- 10, [675614]
[2024-06-27 11:35:09] 2024-06-27 09:34:57,526 | INFO     | zombie collector waiting for pid 675614
[2024-06-27 11:35:09] 2024-06-27 09:34:57,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-27 11:35:09] 2024-06-27 09:34:58,532 | INFO     | collected zombie processes
[2024-06-27 11:35:09] 2024-06-27 09:34:58,532 | INFO     | will now attempt to kill all subprocesses of pid=675614
[2024-06-27 11:35:09] 2024-06-27 09:34:58,637 | INFO     | process IDs to be killed: [675614] (in reverse order)
[2024-06-27 11:35:09] 2024-06-27 09:34:58,704 | WARNING  | found no corresponding commands to process id(s)
[2024-06-27 11:35:09] 2024-06-27 09:34:58,704 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-27 11:35:09] 2024-06-27 09:34:58,709 | INFO     | did not find any defunct processes belonging to 675614
[2024-06-27 11:35:09] 2024-06-27 09:34:58,713 | INFO     | did not find any defunct processes belonging to 675614
[2024-06-27 11:35:09] 2024-06-27 09:34:58,713 | INFO     | ready for new job
[2024-06-27 11:35:09] 2024-06-27 09:34:58,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-27 11:35:09] 2024-06-27 09:34:58,715 | INFO     | *************************************
[2024-06-27 11:35:09] 2024-06-27 09:34:58,716 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-27 11:35:09] 2024-06-27 09:34:58,716 | INFO     | *************************************
[2024-06-27 11:35:09] 2024-06-27 09:34:58,716 | INFO     | 
[2024-06-27 11:35:09] 2024-06-27 09:34:58,718 | INFO     | architecture information:
[2024-06-27 11:35:09] 2024-06-27 09:34:58,719 | INFO     | executing command: cat /etc/os-release
[2024-06-27 11:35:09] 2024-06-27 09:34:58,734 | INFO     | cat /etc/os-release:
[2024-06-27 11:35:09] NAME="CentOS Linux"
[2024-06-27 11:35:09] VERSION="7 (Core)"
[2024-06-27 11:35:09] ID="centos"
[2024-06-27 11:35:09] ID_LIKE="rhel fedora"
[2024-06-27 11:35:09] VERSION_ID="7"
[2024-06-27 11:35:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-27 11:35:09] ANSI_COLOR="0;31"
[2024-06-27 11:35:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-27 11:35:09] HOME_URL="https://www.centos.org/"
[2024-06-27 11:35:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-27 11:35:09] 
[2024-06-27 11:35:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-27 11:35:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-27 11:35:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-27 11:35:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-27 11:35:09] 
[2024-06-27 11:35:09] 2024-06-27 09:34:58,735 | INFO     | *************************************
[2024-06-27 11:35:09] 2024-06-27 09:34:59,238 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-06-27 11:35:09] 2024-06-27 09:34:59,258 | INFO     | sufficient remaining disk space (1677599965184 B)
[2024-06-27 11:35:09] 2024-06-27 09:34:59,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-27 11:35:09] 2024-06-27 09:34:59,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-27 11:35:09] 2024-06-27 09:34:59,260 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-27 11:35:09] 2024-06-27 09:34:59,260 | INFO     | found 0 job(s) in 20 queues
[2024-06-27 11:35:09] 2024-06-27 09:34:59,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:35:09] 2024-06-27 09:34:59,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-27 11:35:09] 2024-06-27 09:34:59,261 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-27 11:35:09] 2024-06-27 09:34:59,262 | INFO     | aborting loop
[2024-06-27 11:35:09] 2024-06-27 09:34:59,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-27 11:35:09] 2024-06-27 09:34:59,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-27 11:35:09] 2024-06-27 09:34:59,803 | INFO     | all data control threads have been joined
[2024-06-27 11:35:09] 2024-06-27 09:35:00,265 | INFO     | [job] retrieve thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:00,268 | INFO     | [job] job monitor thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:00,567 | INFO     | all payload control threads have been joined
[2024-06-27 11:35:09] 2024-06-27 09:35:00,808 | INFO     | [data] control thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:00,809 | INFO     | [payload] validate_post thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:00,903 | INFO     | all job control threads have been joined
[2024-06-27 11:35:09] 2024-06-27 09:35:00,967 | INFO     | [payload] execute_payloads thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,268 | INFO     | [data] copytool_out thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,308 | INFO     | [job] validate thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,406 | INFO     | [data] copytool_in thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,477 | INFO     | [job] create_data_payload thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-27 11:35:09] 2024-06-27 09:35:01,507 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,572 | INFO     | [payload] control thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,575 | INFO     | [payload] validate_pre thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,815 | INFO     | [payload] failed_post thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:01,909 | INFO     | [job] control thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:02,504 | INFO     | [job] queue monitor thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:03,292 | INFO     | [data] queue_monitor thread has finished
[2024-06-27 11:35:09] 2024-06-27 09:35:03,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47897528116288)>', '<ExcThread(monitor, started 47897708390144)>']
[2024-06-27 11:35:09] 2024-06-27 09:35:04,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-27 11:35:09] 2024-06-27 09:35:04,287 | INFO     | [monitor] control thread has ended
[2024-06-27 11:35:09] 2024-06-27 09:35:08,908 | INFO     | all workflow threads have been joined
[2024-06-27 11:35:09] 2024-06-27 09:35:08,909 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-27 11:35:09] 2024-06-27 09:35:08,909 | INFO     | traces error code: 0
[2024-06-27 11:35:09] 2024-06-27 09:35:08,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-27 11:35:09] 2024-06-27 09:35:09,019 [wrapper] ==== pilot stdout END ====
[2024-06-27 11:35:09] 2024-06-27 09:35:09,023 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-27 11:35:09] 2024-06-27 09:35:09,027 [wrapper] pilotpid: 668766
[2024-06-27 11:35:09] 2024-06-27 09:35:09,030 [wrapper] Pilot exit status: 0
[2024-06-27 11:35:09] 2024-06-27 09:35:09,043 [wrapper] pandaids: 6245276967
[2024-06-27 11:35:09] 2024-06-27 09:35:09,097 [wrapper] cleanup supervisor_pilot  739965 668767
[2024-06-27 11:35:09] 2024-06-27 09:35:09,101 [wrapper] Test setup, not cleaning
[2024-06-27 11:35:09] 2024-06-27 09:35:09,105 [wrapper] ==== wrapper stdout END ====
[2024-06-27 11:35:09] 2024-06-27 09:35:09,108 [wrapper] ==== wrapper stderr END ====
[2024-06-27 11:35:09] 2024-06-27 09:35:09,115 [wrapper] apfmon messages muted
[2024-06-27 11:35:09]  *** Error codes and diagnostics ***
[2024-06-27 11:35:09]     "exeErrorCode": 0,
[2024-06-27 11:35:09]     "exeErrorDiag": "",
[2024-06-27 11:35:09]     "pilotErrorCode": 0,
[2024-06-27 11:35:09]     "pilotErrorDiag": "",
[2024-06-27 11:35:09]  *** Listing of results directory ***
[2024-06-27 11:35:09] total 663500
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc    469766 Jun 26 19:54 pilot3.tar.gz
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc      5654 Jun 26 19:58 queuedata.json
[2024-06-27 11:35:09] -rwx------ 1 boinc boinc     32220 Jun 26 19:58 runpilot2-wrapper.sh
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc       100 Jun 27 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-27 11:35:09] -rwxr-xr-x 1 boinc boinc      7986 Jun 27 09:41 run_atlas
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc       105 Jun 27 09:41 job.xml
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:41 start_atlas.sh
[2024-06-27 11:35:09] drwxrwx--x 2 boinc boinc      4096 Jun 27 09:41 shared
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc    482507 Jun 27 09:41 input.tar.gz
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc      6456 Jun 27 09:41 init_data.xml
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc 496449460 Jun 27 09:41 EVNT.40092566._000003.pool.root.1
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc         0 Jun 27 09:41 boinc_lockfile
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc      2640 Jun 27 09:41 pandaJob.out
[2024-06-27 11:35:09] -rw------- 1 boinc boinc       424 Jun 27 09:41 setup.sh.local
[2024-06-27 11:35:09] -rw------- 1 boinc boinc   1035495 Jun 27 09:41 agis_schedconf.cvmfs.json
[2024-06-27 11:35:09] -rw------- 1 boinc boinc         0 Jun 27 09:41 agis_ddmendpoints.agis.ALL.json
[2024-06-27 11:35:09] -rw------- 1 boinc boinc   1321363 Jun 27 09:41 cric_ddmendpoints.json
[2024-06-27 11:35:09] drwx------ 4 boinc boinc      4096 Jun 27 09:41 pilot3
[2024-06-27 11:35:09] -rw------- 1 boinc boinc 177551874 Jun 27 11:34 HITS.40092568._000068.pool.root.1
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc       530 Jun 27 11:34 boinc_task_state.xml
[2024-06-27 11:35:09] -rw------- 1 boinc boinc      1037 Jun 27 11:34 memory_monitor_summary.json
[2024-06-27 11:35:09] -rw------- 1 boinc boinc    266108 Jun 27 11:34 log.40092568._000068.job.log.tgz.1
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc        27 Jun 27 11:34 wrapper_checkpoint.txt
[2024-06-27 11:35:09] -rw------- 1 boinc boinc        95 Jun 27 11:34 pilot_heartbeat.json
[2024-06-27 11:35:09] -rw------- 1 boinc boinc      7744 Jun 27 11:34 heartbeat.json
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc      8192 Jun 27 11:34 boinc_mmap_file
[2024-06-27 11:35:09] -rw------- 1 boinc boinc      4345 Jun 27 11:35 pilotlog.txt
[2024-06-27 11:35:09] -rw------- 1 boinc boinc    672949 Jun 27 11:35 log.40092568._000068.job.log.1
[2024-06-27 11:35:09] -rw------- 1 boinc boinc       357 Jun 27 11:35 output.list
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc       620 Jun 27 11:35 runtime_log
[2024-06-27 11:35:09] -rw------- 1 boinc boinc    962560 Jun 27 11:35 result.tar.gz
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc     11409 Jun 27 11:35 runtime_log.err
[2024-06-27 11:35:09] -rw------- 1 boinc boinc       654 Jun 27 11:35 qruMDmR5lg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDm5doKDmpc6J6m.diag
[2024-06-27 11:35:09] -rw-r--r-- 1 boinc boinc     21348 Jun 27 11:35 stderr.txt
[2024-06-27 11:35:09] HITS file was successfully produced:
[2024-06-27 11:35:09] -rw------- 1 boinc boinc 177551874 Jun 27 11:34 shared/HITS.pool.root.1
[2024-06-27 11:35:09]  *** Contents of shared directory: ***
[2024-06-27 11:35:09] total 659644
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc     17537 Jun 27 09:41 start_atlas.sh
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc    482507 Jun 27 09:41 input.tar.gz
[2024-06-27 11:35:09] -rw-r--r-- 2 boinc boinc 496449460 Jun 27 09:41 ATLAS.root_0
[2024-06-27 11:35:09] -rw------- 1 boinc boinc 177551874 Jun 27 11:34 HITS.pool.root.1
[2024-06-27 11:35:09] -rw------- 1 boinc boinc    962560 Jun 27 11:35 result.tar.gz
11:35:11 (665086): run_atlas exited; CPU time 24126.681027
11:35:11 (665086): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN