Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:05 (49387): wrapper (7.7.26015): starting
13:02:05 (49387): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 13:02:05] Arguments: --nthreads 8
[2024-06-26 13:02:05] Threads: 8
[2024-06-26 13:02:05] Checking for CVMFS
[2024-06-26 13:02:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 13:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 13:02:07] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 13:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 13:02:08] 2.11.2.0 47030 1138 168544 134325 2 699 17516563 18432000 24303 130560 0 9194210 99.200 14804288 54765 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 13:02:08] CVMFS is ok
[2024-06-26 13:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 13:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 13:02:08] Further information can be found at the LHC@home message board.
[2024-06-26 13:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 13:02:08] Checking for apptainer binary...
[2024-06-26 13:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 13:02:08] Running /usr/bin/apptainer --version
[2024-06-26 13:02:08] apptainer version 1.3.2-1.el7
[2024-06-26 13:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 13:02:30] c-210-40.aglt2.org
[2024-06-26 13:02:30] apptainer works
[2024-06-26 13:02:30] Set ATHENA_PROC_NUMBER=8
[2024-06-26 13:02:30] Set ATHENA_CORE_NUMBER=8
[2024-06-26 13:02:30] Starting ATLAS job with PandaID=6245239509
[2024-06-26 13:02:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 22:55:37]  *** The last 200 lines of the pilot log: ***
[2024-06-26 22:55:37] 2024-06-27 02:55:08,807 | INFO     | job 6245239509 has state=finished
[2024-06-26 22:55:37] 2024-06-27 02:55:08,807 | INFO     | preparing for final server update for job 6245239509 in state='finished'
[2024-06-26 22:55:37] 2024-06-27 02:55:08,922 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-06-26 22:55:37] 2024-06-27 02:55:08,923 | INFO     | this job has now completed (state=finished)
[2024-06-26 22:55:37] 2024-06-27 02:55:08,923 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-26 22:55:37] 2024-06-27 02:55:08,923 | INFO     | job 6245239509 has finished - writing final server update
[2024-06-26 22:55:37] 2024-06-27 02:55:08,923 | INFO     | total number of processed events: 400 (read)
[2024-06-26 22:55:37] 2024-06-27 02:55:08,926 | INFO     | executing command: lscpu
[2024-06-26 22:55:37] 2024-06-27 02:55:08,955 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-06-26 22:55:37] 2024-06-27 02:55:08,955 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-26 22:55:37] 2024-06-27 02:55:08,988 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-26 22:55:37] 2024-06-27 02:55:15,061 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 22:55:37] 2024-06-27 02:55:15,062 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6245239509/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,063 | INFO     | extracted standard info from prmon json
[2024-06-26 22:55:37] 2024-06-27 02:55:15,063 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 22:55:37] 2024-06-27 02:55:15,063 | WARNING  | GPU info not found in prmon json
[2024-06-26 22:55:37] 2024-06-27 02:55:15,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 22:55:37] 2024-06-27 02:55:15,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 22:55:37] 2024-06-27 02:55:15,072 | INFO     | fitting pss+swap vs Time
[2024-06-26 22:55:37] 2024-06-27 02:55:15,072 | INFO     | model: linear, x: [1719421768.0, 1719421829.0, 1719421890.0, 1719421951.0, 1719422012.0, 1719422073.0, 1719422134.0, 1719422195.0, 1719422256.0, 1719422317.0, 1719
[2024-06-26 22:55:37] 2024-06-27 02:55:15,073 | INFO     | sum of square deviations: 59257347837.32643
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | sum of deviations: 1230770729924.7808
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | mean x: 1719439305.6076388
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | mean y: 2428025.640625
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | -- intersect: -35710199124.55807
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | intersect: -35710199124.55807
[2024-06-26 22:55:37] 2024-06-27 02:55:15,079 | INFO     | chi2: 18.197882817569194
[2024-06-26 22:55:37] 2024-06-27 02:55:15,080 | INFO     | model: linear, x: [1719421768.0, 1719421829.0, 1719421890.0, 1719421951.0, 1719422012.0, 1719422073.0, 1719422134.0, 1719422195.0, 1719422256.0, 1719422317.0, 1719
[2024-06-26 22:55:37] 2024-06-27 02:55:15,080 | INFO     | sum of square deviations: 57727552017.2681
[2024-06-26 22:55:37] 2024-06-27 02:55:15,090 | INFO     | sum of deviations: 1218046465773.319
[2024-06-26 22:55:37] 2024-06-27 02:55:15,090 | INFO     | mean x: 1719439153.1085815
[2024-06-26 22:55:37] 2024-06-27 02:55:15,090 | INFO     | mean y: 2426757.220665499
[2024-06-26 22:55:37] 2024-06-27 02:55:15,090 | INFO     | -- intersect: -36277593967.19338
[2024-06-26 22:55:37] 2024-06-27 02:55:15,090 | INFO     | intersect: -36277593967.19338
[2024-06-26 22:55:37] 2024-06-27 02:55:15,091 | INFO     | chi2: 18.19227119747383
[2024-06-26 22:55:37] 2024-06-27 02:55:15,091 | INFO     | current chi2=18.19227119747383 (change=0.030836664636325478 %)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,091 | INFO     | right removable region: 570
[2024-06-26 22:55:37] 2024-06-27 02:55:15,092 | INFO     | model: linear, x: [1719422073.0, 1719422134.0, 1719422195.0, 1719422256.0, 1719422317.0, 1719422378.0, 1719422439.0, 1719422500.0, 1719422561.0, 1719422622.0, 1719
[2024-06-26 22:55:37] 2024-06-27 02:55:15,092 | INFO     | sum of square deviations: 57727514197.2681
[2024-06-26 22:55:37] 2024-06-27 02:55:15,099 | INFO     | sum of deviations: 1042396383591.7399
[2024-06-26 22:55:37] 2024-06-27 02:55:15,099 | INFO     | mean x: 1719439458.1085815
[2024-06-26 22:55:37] 2024-06-27 02:55:15,099 | INFO     | mean y: 2446796.665499124
[2024-06-26 22:55:37] 2024-06-27 02:55:15,099 | INFO     | -- intersect: -31045789003.208023
[2024-06-26 22:55:37] 2024-06-27 02:55:15,099 | INFO     | intersect: -31045789003.208023
[2024-06-26 22:55:37] 2024-06-27 02:55:15,100 | INFO     | chi2: 13.790618930911796
[2024-06-26 22:55:37] 2024-06-27 02:55:15,100 | INFO     | current chi2=13.790618930911796 (change=24.218552953876557 %)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,100 | INFO     | left removable region: 10
[2024-06-26 22:55:37] 2024-06-27 02:55:15,100 | INFO     | model: linear, x: [1719422378.0, 1719422439.0, 1719422500.0, 1719422561.0, 1719422622.0, 1719422683.0, 1719422744.0, 1719422805.0, 1719422866.0, 1719422927.0, 1719
[2024-06-26 22:55:37] 2024-06-27 02:55:15,101 | INFO     | sum of square deviations: 54455084529.13568
[2024-06-26 22:55:37] 2024-06-27 02:55:15,106 | INFO     | sum of deviations: 897433299731.5023
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | mean x: 1719439427.6107142
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | mean y: 2459110.0160714285
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | -- intersect: -28334329135.781567
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | intersect: -28334329135.781567
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | chi2: 11.740582102569453
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | -- intersect: -28334329135.781567
[2024-06-26 22:55:37] 2024-06-27 02:55:15,107 | INFO     | current memory leak: 16.48 B/s (using 560 data points, chi2=11.74)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,108 | INFO     | ..............................
[2024-06-26 22:55:37] 2024-06-27 02:55:15,108 | INFO     | . Timing measurements:
[2024-06-26 22:55:37] 2024-06-27 02:55:15,108 | INFO     | . get job = 0 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . initial setup = 8 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . payload setup = 81 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . stage-in = 0 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . payload execution = 35231 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . stage-out = 1 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | . log creation = 0 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,109 | INFO     | ..............................
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | 
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | job summary report
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | --------------------------------------------------
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | PanDA job id: 6245239509
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | task id: 38921007
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | errors: (none)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | pilot state: finished 
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | transexitcode: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | exeerrorcode: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:15,189 | INFO     | exeerrordiag: 
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | exitcode: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | exitmsg: OK
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | cpuconsumptiontime: 123391 s
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | nevents: 400
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | neventsw: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | pid: 18411
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | pgrp: 18411
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | corecount: 8
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | event service: False
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | sizes: {0: 2386962, 1: 2387161, 12: 2387161, 23: 2387189, 34: 2387217, 44: 2387245, 49: 2387607, 55: 2387635, 35314: 2427336, 35316: 2436296, 35318: 2436352, 35326
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | --------------------------------------------------
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | 
[2024-06-26 22:55:37] 2024-06-27 02:55:15,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-26 22:55:37] 2024-06-27 02:55:15,211 | WARNING  | process 18411 is no longer using CPU - aborting
[2024-06-26 22:55:37] 2024-06-27 02:55:15,215 | INFO     | aborting job monitoring since job object (job id=6245239509) has expired
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,231 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | job 6245239509 has completed (purged errors)
[2024-06-26 22:55:37] 2024-06-27 02:55:15,232 | INFO     | overall cleanup function is called
[2024-06-26 22:55:37] 2024-06-27 02:55:16,239 | INFO     | --- collectZombieJob: --- 10, [18411]
[2024-06-26 22:55:37] 2024-06-27 02:55:16,240 | INFO     | zombie collector waiting for pid 18411
[2024-06-26 22:55:37] 2024-06-27 02:55:16,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 22:55:37] 2024-06-27 02:55:17,245 | INFO     | collected zombie processes
[2024-06-26 22:55:37] 2024-06-27 02:55:17,245 | INFO     | will now attempt to kill all subprocesses of pid=18411
[2024-06-26 22:55:37] 2024-06-27 02:55:17,378 | INFO     | process IDs to be killed: [18411] (in reverse order)
[2024-06-26 22:55:37] 2024-06-27 02:55:17,462 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 22:55:37] 2024-06-27 02:55:17,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 22:55:37] 2024-06-27 02:55:17,469 | INFO     | did not find any defunct processes belonging to 18411
[2024-06-26 22:55:37] 2024-06-27 02:55:17,475 | INFO     | did not find any defunct processes belonging to 18411
[2024-06-26 22:55:37] 2024-06-27 02:55:17,475 | INFO     | ready for new job
[2024-06-26 22:55:37] 2024-06-27 02:55:17,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 22:55:37] 2024-06-27 02:55:17,477 | INFO     | *************************************
[2024-06-26 22:55:37] 2024-06-27 02:55:17,477 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 22:55:37] 2024-06-27 02:55:17,477 | INFO     | *************************************
[2024-06-26 22:55:37] 2024-06-27 02:55:17,477 | INFO     | 
[2024-06-26 22:55:37] 2024-06-27 02:55:17,480 | INFO     | architecture information:
[2024-06-26 22:55:37] 2024-06-27 02:55:17,481 | INFO     | executing command: cat /etc/os-release
[2024-06-26 22:55:37] 2024-06-27 02:55:17,496 | INFO     | cat /etc/os-release:
[2024-06-26 22:55:37] NAME="CentOS Linux"
[2024-06-26 22:55:37] VERSION="7 (Core)"
[2024-06-26 22:55:37] ID="centos"
[2024-06-26 22:55:37] ID_LIKE="rhel fedora"
[2024-06-26 22:55:37] VERSION_ID="7"
[2024-06-26 22:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 22:55:37] ANSI_COLOR="0;31"
[2024-06-26 22:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 22:55:37] HOME_URL="https://www.centos.org/"
[2024-06-26 22:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 22:55:37] 
[2024-06-26 22:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 22:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 22:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 22:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 22:55:37] 
[2024-06-26 22:55:37] 2024-06-27 02:55:17,496 | INFO     | *************************************
[2024-06-26 22:55:37] 2024-06-27 02:55:17,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-26 22:55:37] 2024-06-27 02:55:18,019 | INFO     | sufficient remaining disk space (75352768512 B)
[2024-06-26 22:55:37] 2024-06-27 02:55:18,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 22:55:37] 2024-06-27 02:55:18,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 22:55:37] 2024-06-27 02:55:18,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 22:55:37] 2024-06-27 02:55:18,086 | INFO     | all data control threads have been joined
[2024-06-26 22:55:37] 2024-06-27 02:55:18,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 22:55:37] 2024-06-27 02:55:18,628 | INFO     | all payload control threads have been joined
[2024-06-26 22:55:37] 2024-06-27 02:55:18,691 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 22:55:37] 2024-06-27 02:55:18,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 22:55:37] 2024-06-27 02:55:18,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 22:55:37] 2024-06-27 02:55:18,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:55:37] 2024-06-27 02:55:18,723 | INFO     | aborting loop
[2024-06-26 22:55:37] 2024-06-27 02:55:19,025 | INFO     | [job] retrieve thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,092 | INFO     | [data] control thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,276 | INFO     | all job control threads have been joined
[2024-06-26 22:55:37] 2024-06-27 02:55:19,312 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,426 | INFO     | [payload] failed_post thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,634 | INFO     | [payload] control thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,696 | INFO     | [payload] validate_post thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,728 | INFO     | [job] job monitor thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:19,739 | INFO     | [job] validate thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:20,090 | INFO     | [data] copytool_in thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:20,144 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:20,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 22:55:37] 2024-06-27 02:55:20,201 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:20,282 | INFO     | [job] control thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:20,403 | INFO     | [data] copytool_out thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:21,204 | INFO     | [job] queue monitor thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:22,027 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:29,039 | INFO     | job.realtimelogging is not enabled
[2024-06-26 22:55:37] 2024-06-27 02:55:30,045 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 22:55:37] 2024-06-27 02:55:31,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932177291072)>', '<ExcThread(monitor, started 139931871586048)>']
[2024-06-26 22:55:37] 2024-06-27 02:55:32,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 22:55:37] 2024-06-27 02:55:32,771 | INFO     | [monitor] control thread has ended
[2024-06-26 22:55:37] 2024-06-27 02:55:36,962 | INFO     | all workflow threads have been joined
[2024-06-26 22:55:37] 2024-06-27 02:55:36,963 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 22:55:37] 2024-06-27 02:55:36,966 | INFO     | traces error code: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:36,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 22:55:37] 2024-06-27 02:55:37,073 [wrapper] ==== pilot stdout END ====
[2024-06-26 22:55:37] 2024-06-27 02:55:37,075 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 22:55:37] 2024-06-27 02:55:37,076 [wrapper] pilotpid: 17163
[2024-06-26 22:55:37] 2024-06-27 02:55:37,078 [wrapper] Pilot exit status: 0
[2024-06-26 22:55:37] 2024-06-27 02:55:37,089 [wrapper] pandaids: 6245239509
[2024-06-26 22:55:37] 2024-06-27 02:55:37,141 [wrapper] cleanup supervisor_pilot 11159 17164
[2024-06-26 22:55:37] 2024-06-27 02:55:37,144 [wrapper] Test setup, not cleaning
[2024-06-26 22:55:37] 2024-06-27 02:55:37,145 [wrapper] ==== wrapper stdout END ====
[2024-06-26 22:55:37] 2024-06-27 02:55:37,147 [wrapper] ==== wrapper stderr END ====
[2024-06-26 22:55:37] 2024-06-27 02:55:37,151 [wrapper] apfmon messages muted
[2024-06-26 22:55:37]  *** Error codes and diagnostics ***
[2024-06-26 22:55:37]     "exeErrorCode": 0,
[2024-06-26 22:55:37]     "exeErrorDiag": "",
[2024-06-26 22:55:37]     "pilotErrorCode": 0,
[2024-06-26 22:55:37]     "pilotErrorDiag": "",
[2024-06-26 22:55:37]  *** Listing of results directory ***
[2024-06-26 22:55:37] total 930224
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 12:39 pilot3.tar.gz
[2024-06-26 22:55:37] -rwx------ 1 boincer umatlas     32220 Jun 26 13:01 runpilot2-wrapper.sh
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 13:01 queuedata.json
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas       100 Jun 26 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 22:55:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 13:02 run_atlas
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas       105 Jun 26 13:02 job.xml
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas 585992337 Jun 26 13:02 EVNT.38776201._000371.pool.root.1
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 13:02 start_atlas.sh
[2024-06-26 22:55:37] drwxrwx--x 2 boincer umatlas      4096 Jun 26 13:02 shared
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas    482518 Jun 26 13:02 input.tar.gz
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas         0 Jun 26 13:02 boinc_lockfile
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas      2629 Jun 26 13:02 pandaJob.out
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas       467 Jun 26 13:02 setup.sh.local
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas   1033200 Jun 26 13:04 agis_schedconf.cvmfs.json
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas   1321363 Jun 26 13:04 cric_ddmendpoints.json
[2024-06-26 22:55:37] drwx------ 4 boincer umatlas      4096 Jun 26 13:04 pilot3
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas 355060829 Jun 26 22:54 HITS.38921007._055277.pool.root.1
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas      6341 Jun 26 22:54 init_data.xml
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas       533 Jun 26 22:54 boinc_task_state.xml
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas      1087 Jun 26 22:55 memory_monitor_summary.json
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas         0 Jun 26 22:55 agis_ddmendpoints.agis.ALL.json
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas    617986 Jun 26 22:55 log.38921007._055277.job.log.tgz.1
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas        95 Jun 26 22:55 pilot_heartbeat.json
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas      7763 Jun 26 22:55 heartbeat.json
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 22:55 boinc_mmap_file
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas        29 Jun 26 22:55 wrapper_checkpoint.txt
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas      4283 Jun 26 22:55 pilotlog.txt
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas   3359346 Jun 26 22:55 log.38921007._055277.job.log.1
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas       357 Jun 26 22:55 output.list
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas       620 Jun 26 22:55 runtime_log
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas   3993600 Jun 26 22:55 result.tar.gz
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas       653 Jun 26 22:55 o4BODmBClg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmIcoKDmAuBFLm.diag
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas     11405 Jun 26 22:55 runtime_log.err
[2024-06-26 22:55:37] -rw-r--r-- 1 boincer umatlas     21781 Jun 26 22:55 stderr.txt
[2024-06-26 22:55:37] HITS file was successfully produced:
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas 355060829 Jun 26 22:54 shared/HITS.pool.root.1
[2024-06-26 22:55:37]  *** Contents of shared directory: ***
[2024-06-26 22:55:37] total 923400
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas 585992337 Jun 26 13:02 ATLAS.root_0
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 13:02 start_atlas.sh
[2024-06-26 22:55:37] -rw-r--r-- 2 boincer umatlas    482518 Jun 26 13:02 input.tar.gz
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas 355060829 Jun 26 22:54 HITS.pool.root.1
[2024-06-26 22:55:37] -rw------- 1 boincer umatlas   3993600 Jun 26 22:55 result.tar.gz
22:55:38 (49387): run_atlas exited; CPU time 120633.361413
22:55:38 (49387): called boinc_finish(0)

</stderr_txt>
]]>

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