Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:56 (80486): wrapper (7.7.26015): starting
10:57:56 (80486): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 10:57:56] Arguments: --nthreads 8
[2024-06-26 10:57:56] Threads: 8
[2024-06-26 10:57:56] Checking for CVMFS
[2024-06-26 10:57:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 10:57:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 10:57:56] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 10:57:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 10:57:56] 2.11.2.0 19246 296 100472 134321 0 148 16458404 18432001 18571 130560 0 2405027 98.851 5886870 20986 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 10:57:56] CVMFS is ok
[2024-06-26 10:57:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 10:57:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 10:57:56] Further information can be found at the LHC@home message board.
[2024-06-26 10:57:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 10:57:56] Checking for apptainer binary...
[2024-06-26 10:57:56] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 10:57:56] Running /usr/bin/apptainer --version
[2024-06-26 10:57:56] apptainer version 1.3.1-1.el7
[2024-06-26 10:57:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 10:57:58] c-212-2.aglt2.org
[2024-06-26 10:57:58] apptainer works
[2024-06-26 10:57:58] Set ATHENA_PROC_NUMBER=8
[2024-06-26 10:57:58] Set ATHENA_CORE_NUMBER=8
[2024-06-26 10:57:58] Starting ATLAS job with PandaID=6245123699
[2024-06-26 10:57:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 14:31:35]  *** The last 200 lines of the pilot log: ***
[2024-06-26 14:31:35] 2024-06-26 18:31:08,578 | INFO     | stage-out finished correctly
[2024-06-26 14:31:35] 2024-06-26 18:31:09,572 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-06-26 14:31:35] 2024-06-26 18:31:09,740 | INFO     | job 6245123699 has state=finished
[2024-06-26 14:31:35] 2024-06-26 18:31:09,740 | INFO     | preparing for final server update for job 6245123699 in state='finished'
[2024-06-26 14:31:35] 2024-06-26 18:31:09,741 | INFO     | this job has now completed (state=finished)
[2024-06-26 14:31:35] 2024-06-26 18:31:09,741 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-06-26 14:31:35] 2024-06-26 18:31:09,741 | INFO     | job 6245123699 has finished - writing final server update
[2024-06-26 14:31:35] 2024-06-26 18:31:09,741 | INFO     | total number of processed events: 400 (read)
[2024-06-26 14:31:35] 2024-06-26 18:31:09,745 | INFO     | executing command: lscpu
[2024-06-26 14:31:35] 2024-06-26 18:31:09,856 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-06-26 14:31:35] 2024-06-26 18:31:09,856 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-06-26 14:31:35] 2024-06-26 18:31:09,956 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-26 14:31:35] 2024-06-26 18:31:21,723 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 14:31:35] 2024-06-26 18:31:21,724 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6245123699/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,724 | INFO     | extracted standard info from prmon json
[2024-06-26 14:31:35] 2024-06-26 18:31:21,725 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 14:31:35] 2024-06-26 18:31:21,725 | WARNING  | GPU info not found in prmon json
[2024-06-26 14:31:35] 2024-06-26 18:31:21,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 14:31:35] 2024-06-26 18:31:21,725 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 14:31:35] 2024-06-26 18:31:21,751 | INFO     | fitting pss+swap vs Time
[2024-06-26 14:31:35] 2024-06-26 18:31:21,752 | INFO     | model: linear, x: [1719413919.0, 1719413980.0, 1719414041.0, 1719414102.0, 1719414163.0, 1719414224.0, 1719414285.0, 1719414346.0, 1719414407.0, 1719414468.0, 1719
[2024-06-26 14:31:35] 2024-06-26 18:31:21,752 | INFO     | sum of square deviations: 2830802492.421064
[2024-06-26 14:31:35] 2024-06-26 18:31:21,772 | INFO     | sum of deviations: 337547644897.26324
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | mean x: 1719420263.0526316
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | mean y: 2211580.1578947366
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | -- intersect: -205023134390.08295
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | intersect: -205023134390.08295
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | chi2: 13.75346394504991
[2024-06-26 14:31:35] 2024-06-26 18:31:21,773 | INFO     | model: linear, x: [1719413919.0, 1719413980.0, 1719414041.0, 1719414102.0, 1719414163.0, 1719414224.0, 1719414285.0, 1719414346.0, 1719414407.0, 1719414468.0, 1719
[2024-06-26 14:31:35] 2024-06-26 18:31:21,774 | INFO     | sum of square deviations: 2632457942.4068613
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | sum of deviations: 327448101602.2942
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | mean x: 1719420110.5539215
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | mean y: 2203813.882352941
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | -- intersect: -213874280967.8336
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | intersect: -213874280967.8336
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | chi2: 13.573666840795548
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | current chi2=13.573666840795548 (change=1.307285967903919 %)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | right removable region: 203
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | model: linear, x: [1719414224.0, 1719414285.0, 1719414346.0, 1719414407.0, 1719414468.0, 1719414529.0, 1719414590.0, 1719414651.0, 1719414712.0, 1719414773.0, 1719
[2024-06-26 14:31:35] 2024-06-26 18:31:21,775 | INFO     | sum of square deviations: 2632451232.4068613
[2024-06-26 14:31:35] 2024-06-26 18:31:21,776 | INFO     | sum of deviations: 281864846652.25494
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | mean x: 1719420415.5539215
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | mean y: 2254297.431372549
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | -- intersect: -184101506408.42236
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | intersect: -184101506408.42236
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | chi2: 10.715535247806464
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | current chi2=10.715535247806464 (change=22.08846229125314 %)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | left removable region: 10
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | model: linear, x: [1719414529.0, 1719414590.0, 1719414651.0, 1719414712.0, 1719414773.0, 1719414834.0, 1719414895.0, 1719414956.0, 1719415017.0, 1719415078.0, 1719
[2024-06-26 14:31:35] 2024-06-26 18:31:21,777 | INFO     | sum of square deviations: 2229158760.3730617
[2024-06-26 14:31:35] 2024-06-26 18:31:21,778 | INFO     | sum of deviations: 228881371465.22806
[2024-06-26 14:31:35] 2024-06-26 18:31:21,778 | INFO     | mean x: 1719420385.056995
[2024-06-26 14:31:35] 2024-06-26 18:31:21,778 | INFO     | mean y: 2282675.9792746115
[2024-06-26 14:31:35] 2024-06-26 18:31:21,779 | INFO     | -- intersect: -176541130405.6686
[2024-06-26 14:31:35] 2024-06-26 18:31:21,779 | INFO     | intersect: -176541130405.6686
[2024-06-26 14:31:35] 2024-06-26 18:31:21,779 | INFO     | chi2: 9.086552923775344
[2024-06-26 14:31:35] 2024-06-26 18:31:21,779 | INFO     | -- intersect: -176541130405.6686
[2024-06-26 14:31:35] 2024-06-26 18:31:21,779 | INFO     | current memory leak: 102.68 B/s (using 193 data points, chi2=9.09)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | ..............................
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . Timing measurements:
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . get job = 0 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . initial setup = 1 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . payload setup = 7 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . stage-in = 0 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . payload execution = 12751 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . stage-out = 2 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | . log creation = 0 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,780 | INFO     | ..............................
[2024-06-26 14:31:35] 2024-06-26 18:31:21,861 | INFO     | 
[2024-06-26 14:31:35] 2024-06-26 18:31:21,861 | INFO     | job summary report
[2024-06-26 14:31:35] 2024-06-26 18:31:21,861 | INFO     | --------------------------------------------------
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | PanDA job id: 6245123699
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | task id: 40092541
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | errors: (none)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | pilot state: finished 
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | transexitcode: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | exeerrorcode: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | exeerrordiag: 
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | exitcode: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | exitmsg: OK
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | cpuconsumptiontime: 34112 s
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | nevents: 400
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | neventsw: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | pid: 7707
[2024-06-26 14:31:35] 2024-06-26 18:31:21,862 | INFO     | pgrp: 7707
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | corecount: 8
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | event service: False
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | sizes: {0: 2386151, 1: 2387086, 5: 2387292, 12: 2387348, 12762: 2416919, 12764: 2425879, 12765: 2426063, 12777: 2426233}
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | --------------------------------------------------
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | 
[2024-06-26 14:31:35] 2024-06-26 18:31:21,863 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-06-26 14:31:35] 2024-06-26 18:31:21,919 | WARNING  | process 7707 is no longer using CPU - aborting
[2024-06-26 14:31:35] 2024-06-26 18:31:21,920 | INFO     | aborting job monitoring since job object (job id=6245123699) has expired
[2024-06-26 14:31:35] 2024-06-26 18:31:21,943 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | job 6245123699 has completed (purged errors)
[2024-06-26 14:31:35] 2024-06-26 18:31:21,945 | INFO     | overall cleanup function is called
[2024-06-26 14:31:35] 2024-06-26 18:31:22,953 | INFO     | --- collectZombieJob: --- 10, [7707]
[2024-06-26 14:31:35] 2024-06-26 18:31:22,953 | INFO     | zombie collector waiting for pid 7707
[2024-06-26 14:31:35] 2024-06-26 18:31:22,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 14:31:35] 2024-06-26 18:31:23,958 | INFO     | collected zombie processes
[2024-06-26 14:31:35] 2024-06-26 18:31:23,958 | INFO     | will now attempt to kill all subprocesses of pid=7707
[2024-06-26 14:31:35] 2024-06-26 18:31:24,134 | INFO     | process IDs to be killed: [7707] (in reverse order)
[2024-06-26 14:31:35] 2024-06-26 18:31:24,297 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 14:31:35] 2024-06-26 18:31:24,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 14:31:35] 2024-06-26 18:31:24,307 | INFO     | did not find any defunct processes belonging to 7707
[2024-06-26 14:31:35] 2024-06-26 18:31:24,315 | INFO     | did not find any defunct processes belonging to 7707
[2024-06-26 14:31:35] 2024-06-26 18:31:24,315 | INFO     | ready for new job
[2024-06-26 14:31:35] 2024-06-26 18:31:24,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 14:31:35] 2024-06-26 18:31:24,317 | INFO     | *************************************
[2024-06-26 14:31:35] 2024-06-26 18:31:24,317 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 14:31:35] 2024-06-26 18:31:24,317 | INFO     | *************************************
[2024-06-26 14:31:35] 2024-06-26 18:31:24,318 | INFO     | 
[2024-06-26 14:31:35] 2024-06-26 18:31:24,325 | INFO     | architecture information:
[2024-06-26 14:31:35] 2024-06-26 18:31:24,325 | INFO     | executing command: cat /etc/os-release
[2024-06-26 14:31:35] 2024-06-26 18:31:24,391 | INFO     | cat /etc/os-release:
[2024-06-26 14:31:35] NAME="CentOS Linux"
[2024-06-26 14:31:35] VERSION="7 (Core)"
[2024-06-26 14:31:35] ID="centos"
[2024-06-26 14:31:35] ID_LIKE="rhel fedora"
[2024-06-26 14:31:35] VERSION_ID="7"
[2024-06-26 14:31:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 14:31:35] ANSI_COLOR="0;31"
[2024-06-26 14:31:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 14:31:35] HOME_URL="https://www.centos.org/"
[2024-06-26 14:31:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 14:31:35] 
[2024-06-26 14:31:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 14:31:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 14:31:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 14:31:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 14:31:35] 
[2024-06-26 14:31:35] 2024-06-26 18:31:24,391 | INFO     | *************************************
[2024-06-26 14:31:35] 2024-06-26 18:31:24,894 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-06-26 14:31:35] 2024-06-26 18:31:24,957 | INFO     | sufficient remaining disk space (100244914176 B)
[2024-06-26 14:31:35] 2024-06-26 18:31:24,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 14:31:35] 2024-06-26 18:31:24,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 14:31:35] 2024-06-26 18:31:24,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 14:31:35] 2024-06-26 18:31:24,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 14:31:35] 2024-06-26 18:31:25,172 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 14:31:35] 2024-06-26 18:31:25,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 14:31:35] 2024-06-26 18:31:25,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 14:31:35] 2024-06-26 18:31:25,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 14:31:35] 2024-06-26 18:31:25,429 | INFO     | aborting loop
[2024-06-26 14:31:35] 2024-06-26 18:31:25,898 | INFO     | all data control threads have been joined
[2024-06-26 14:31:35] 2024-06-26 18:31:25,963 | INFO     | [job] retrieve thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,413 | INFO     | all job control threads have been joined
[2024-06-26 14:31:35] 2024-06-26 18:31:26,434 | INFO     | [job] job monitor thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,440 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,456 | INFO     | all payload control threads have been joined
[2024-06-26 14:31:35] 2024-06-26 18:31:26,680 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,705 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,820 | INFO     | [payload] failed_post thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 14:31:35] 2024-06-26 18:31:26,891 | INFO     | [data] copytool_in thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,893 | INFO     | [payload] validate_post thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,903 | INFO     | [data] control thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:26,964 | INFO     | [data] copytool_out thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:27,202 | INFO     | [job] validate thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:27,203 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:27,419 | INFO     | [job] control thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:27,463 | INFO     | [payload] control thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:27,878 | INFO     | [job] queue monitor thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:28,966 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 14:31:35] 2024-06-26 18:31:29,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139748158908224)>', '<ExcThread(monitor, started 139747859080960)>']
[2024-06-26 14:31:35] 2024-06-26 18:31:30,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 14:31:35] 2024-06-26 18:31:30,201 | INFO     | [monitor] control thread has ended
[2024-06-26 14:31:35] 2024-06-26 18:31:34,650 | INFO     | all workflow threads have been joined
[2024-06-26 14:31:35] 2024-06-26 18:31:34,650 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 14:31:35] 2024-06-26 18:31:34,654 | INFO     | traces error code: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:34,655 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 14:31:35] 2024-06-26 18:31:34,833 [wrapper] ==== pilot stdout END ====
[2024-06-26 14:31:35] 2024-06-26 18:31:34,856 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 14:31:35] 2024-06-26 18:31:34,892 [wrapper] pilotpid: 87828
[2024-06-26 14:31:35] 2024-06-26 18:31:34,931 [wrapper] Pilot exit status: 0
[2024-06-26 14:31:35] 2024-06-26 18:31:34,971 [wrapper] pandaids: 6245123699
[2024-06-26 14:31:35] 2024-06-26 18:31:35,054 [wrapper] cleanup supervisor_pilot 13773 87829
[2024-06-26 14:31:35] 2024-06-26 18:31:35,057 [wrapper] Test setup, not cleaning
[2024-06-26 14:31:35] 2024-06-26 18:31:35,081 [wrapper] ==== wrapper stdout END ====
[2024-06-26 14:31:35] 2024-06-26 18:31:35,084 [wrapper] ==== wrapper stderr END ====
[2024-06-26 14:31:35] 2024-06-26 18:31:35,091 [wrapper] apfmon messages muted
[2024-06-26 14:31:35]  *** Error codes and diagnostics ***
[2024-06-26 14:31:35]     "exeErrorCode": 0,
[2024-06-26 14:31:35]     "exeErrorDiag": "",
[2024-06-26 14:31:35]     "pilotErrorCode": 0,
[2024-06-26 14:31:35]     "pilotErrorDiag": "",
[2024-06-26 14:31:35]  *** Listing of results directory ***
[2024-06-26 14:31:35] total 678900
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 10:53 pilot3.tar.gz
[2024-06-26 14:31:35] -rwx------ 1 boincer umatlas     32220 Jun 26 10:56 runpilot2-wrapper.sh
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 10:56 queuedata.json
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas       100 Jun 26 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 14:31:35] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 10:57 run_atlas
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas       105 Jun 26 10:57 job.xml
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas 499992866 Jun 26 10:57 EVNT.40092539._000003.pool.root.1
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 10:57 start_atlas.sh
[2024-06-26 14:31:35] drwxrwx--x 2 boincer umatlas      4096 Jun 26 10:57 shared
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas    482496 Jun 26 10:57 input.tar.gz
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas         0 Jun 26 10:57 boinc_lockfile
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas      2632 Jun 26 10:57 pandaJob.out
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas       467 Jun 26 10:57 setup.sh.local
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas   1033150 Jun 26 10:58 agis_schedconf.cvmfs.json
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas   1321363 Jun 26 10:58 cric_ddmendpoints.json
[2024-06-26 14:31:35] drwx------ 4 boincer umatlas      4096 Jun 26 10:58 pilot3
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas      6388 Jun 26 14:28 init_data.xml
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas 188660034 Jun 26 14:30 HITS.40092541._000063.pool.root.1
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas       532 Jun 26 14:30 boinc_task_state.xml
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas        95 Jun 26 14:30 pilot_heartbeat.json
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas      1089 Jun 26 14:31 memory_monitor_summary.json
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas         0 Jun 26 14:31 agis_ddmendpoints.agis.ALL.json
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas    380571 Jun 26 14:31 log.40092541._000063.job.log.tgz.1
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas      7746 Jun 26 14:31 heartbeat.json
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas      4212 Jun 26 14:31 pilotlog.txt
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas   1119870 Jun 26 14:31 log.40092541._000063.job.log.1
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 14:31 boinc_mmap_file
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas        28 Jun 26 14:31 wrapper_checkpoint.txt
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas       357 Jun 26 14:31 output.list
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas       620 Jun 26 14:31 runtime_log
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas   1515520 Jun 26 14:31 result.tar.gz
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas       651 Jun 26 14:31 ZAQLDmXFjg5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmVaoKDmg2EzQm.diag
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas     11400 Jun 26 14:31 runtime_log.err
[2024-06-26 14:31:35] -rw-r--r-- 1 boincer umatlas     21736 Jun 26 14:31 stderr.txt
[2024-06-26 14:31:35] HITS file was successfully produced:
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas 188660034 Jun 26 14:30 shared/HITS.pool.root.1
[2024-06-26 14:31:35]  *** Contents of shared directory: ***
[2024-06-26 14:31:35] total 674496
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas 499992866 Jun 26 10:57 ATLAS.root_0
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 10:57 start_atlas.sh
[2024-06-26 14:31:35] -rw-r--r-- 2 boincer umatlas    482496 Jun 26 10:57 input.tar.gz
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas 188660034 Jun 26 14:30 HITS.pool.root.1
[2024-06-26 14:31:35] -rw------- 1 boincer umatlas   1515520 Jun 26 14:31 result.tar.gz
14:31:37 (80486): run_atlas exited; CPU time 32981.480459
14:31:37 (80486): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN