Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:58:48 (24978): wrapper (7.7.26015): starting
10:58:48 (24978): wrapper: running run_atlas (--nthreads 8)
[2024-06-26 10:58:48] Arguments: --nthreads 8
[2024-06-26 10:58:48] Threads: 8
[2024-06-26 10:58:48] Checking for CVMFS
[2024-06-26 10:58:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-06-26 10:58:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-06-26 10:58:48] Running cvmfs_config stat atlas.cern.ch
[2024-06-26 10:58:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-06-26 10:58:48] 2.11.2.0 19246 297 115968 134321 3 310 17157429 18432000 19142 130560 0 2513786 98.761 6211114 21835 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-06-26 10:58:48] CVMFS is ok
[2024-06-26 10:58:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-26 10:58:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-26 10:58:48] Further information can be found at the LHC@home message board.
[2024-06-26 10:58:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-26 10:58:48] Checking for apptainer binary...
[2024-06-26 10:58:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-06-26 10:58:48] Running /usr/bin/apptainer --version
[2024-06-26 10:58:48] apptainer version 1.3.1-1.el7
[2024-06-26 10:58:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-26 10:58:49] c-212-2.aglt2.org
[2024-06-26 10:58:49] apptainer works
[2024-06-26 10:58:49] Set ATHENA_PROC_NUMBER=8
[2024-06-26 10:58:49] Set ATHENA_CORE_NUMBER=8
[2024-06-26 10:58:49] Starting ATLAS job with PandaID=6245123564
[2024-06-26 10:58:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-26 14:31:41]  *** The last 200 lines of the pilot log: ***
[2024-06-26 14:31:41] 2024-06-26 18:31:08,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-06-26 14:31:41] 2024-06-26 18:31:09,278 | INFO     | monitor loop #925: job 0:6245123564 is in state 'finished'
[2024-06-26 14:31:41] 2024-06-26 18:31:09,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 14:31:41] 2024-06-26 18:31:11,783 | INFO     | monitor loop #926: job 0:6245123564 is in state 'finished'
[2024-06-26 14:31:41] 2024-06-26 18:31:11,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 14:31:41] 2024-06-26 18:31:14,287 | INFO     | monitor loop #927: job 0:6245123564 is in state 'finished'
[2024-06-26 14:31:41] 2024-06-26 18:31:14,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 14:31:41] 2024-06-26 18:31:16,791 | INFO     | monitor loop #928: job 0:6245123564 is in state 'finished'
[2024-06-26 14:31:41] 2024-06-26 18:31:16,791 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,045 | INFO     | CPU arch script returned: x86-64-v3
[2024-06-26 14:31:41] 2024-06-26 18:31:19,046 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6245123564/memory_monitor_summary.json (trf name=prmon)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,047 | INFO     | extracted standard info from prmon json
[2024-06-26 14:31:41] 2024-06-26 18:31:19,047 | INFO     | extracted standard memory fields from prmon json
[2024-06-26 14:31:41] 2024-06-26 18:31:19,047 | WARNING  | GPU info not found in prmon json
[2024-06-26 14:31:41] 2024-06-26 18:31:19,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-26 14:31:41] 2024-06-26 18:31:19,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-26 14:31:41] 2024-06-26 18:31:19,055 | INFO     | fitting pss+swap vs Time
[2024-06-26 14:31:41] 2024-06-26 18:31:19,055 | INFO     | model: linear, x: [1719413968.0, 1719414029.0, 1719414090.0, 1719414151.0, 1719414212.0, 1719414273.0, 1719414334.0, 1719414395.0, 1719414456.0, 1719414517.0, 1719
[2024-06-26 14:31:41] 2024-06-26 18:31:19,055 | INFO     | sum of square deviations: 2830786746.8803973
[2024-06-26 14:31:41] 2024-06-26 18:31:19,056 | INFO     | sum of deviations: 317074154254.2917
[2024-06-26 14:31:41] 2024-06-26 18:31:19,056 | INFO     | mean x: 1719420312.0239234
[2024-06-26 14:31:41] 2024-06-26 18:31:19,056 | INFO     | mean y: 2201188.7416267944
[2024-06-26 14:31:41] 2024-06-26 18:31:19,056 | INFO     | -- intersect: -192588689609.88278
[2024-06-26 14:31:41] 2024-06-26 18:31:19,056 | INFO     | intersect: -192588689609.88278
[2024-06-26 14:31:41] 2024-06-26 18:31:19,057 | INFO     | chi2: 14.870171579899429
[2024-06-26 14:31:41] 2024-06-26 18:31:19,057 | INFO     | model: linear, x: [1719413968.0, 1719414029.0, 1719414090.0, 1719414151.0, 1719414212.0, 1719414273.0, 1719414334.0, 1719414395.0, 1719414456.0, 1719414517.0, 1719
[2024-06-26 14:31:41] 2024-06-26 18:31:19,057 | INFO     | sum of square deviations: 2632440366.877463
[2024-06-26 14:31:41] 2024-06-26 18:31:19,058 | INFO     | sum of deviations: 321702300064.7549
[2024-06-26 14:31:41] 2024-06-26 18:31:19,058 | INFO     | mean x: 1719420159.52451
[2024-06-26 14:31:41] 2024-06-26 18:31:19,058 | INFO     | mean y: 2204534.0490196077
[2024-06-26 14:31:41] 2024-06-26 18:31:19,058 | INFO     | -- intersect: -210122752922.39114
[2024-06-26 14:31:41] 2024-06-26 18:31:19,058 | INFO     | intersect: -210122752922.39114
[2024-06-26 14:31:41] 2024-06-26 18:31:19,059 | INFO     | chi2: 13.816544622725772
[2024-06-26 14:31:41] 2024-06-26 18:31:19,059 | INFO     | current chi2=13.816544622725772 (change=7.0855063878205975 %)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,059 | INFO     | right removable region: 203
[2024-06-26 14:31:41] 2024-06-26 18:31:19,059 | INFO     | model: linear, x: [1719414273.0, 1719414334.0, 1719414395.0, 1719414456.0, 1719414517.0, 1719414578.0, 1719414639.0, 1719414700.0, 1719414761.0, 1719414822.0, 1719
[2024-06-26 14:31:41] 2024-06-26 18:31:19,059 | INFO     | sum of square deviations: 2632437316.877463
[2024-06-26 14:31:41] 2024-06-26 18:31:19,060 | INFO     | sum of deviations: 261457721894.09308
[2024-06-26 14:31:41] 2024-06-26 18:31:19,060 | INFO     | mean x: 1719420464.52451
[2024-06-26 14:31:41] 2024-06-26 18:31:19,060 | INFO     | mean y: 2243855.681372549
[2024-06-26 14:31:41] 2024-06-26 18:31:19,060 | INFO     | -- intersect: -170773240426.66214
[2024-06-26 14:31:41] 2024-06-26 18:31:19,060 | INFO     | intersect: -170773240426.66214
[2024-06-26 14:31:41] 2024-06-26 18:31:19,061 | INFO     | chi2: 11.715913011131429
[2024-06-26 14:31:41] 2024-06-26 18:31:19,061 | INFO     | current chi2=11.715913011131429 (change=21.211985025322306 %)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,061 | INFO     | left removable region: 10
[2024-06-26 14:31:41] 2024-06-26 18:31:19,061 | INFO     | model: linear, x: [1719414578.0, 1719414639.0, 1719414700.0, 1719414761.0, 1719414822.0, 1719414883.0, 1719414944.0, 1719415005.0, 1719415066.0, 1719415127.0, 1719
[2024-06-26 14:31:41] 2024-06-26 18:31:19,061 | INFO     | sum of square deviations: 2229144478.8704643
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | sum of deviations: 222935753604.25397
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | mean x: 1719420434.0259068
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | mean y: 2283644.549222798
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | -- intersect: -171956193634.74863
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | intersect: -171956193634.74863
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | chi2: 9.1771918718178
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | -- intersect: -171956193634.74863
[2024-06-26 14:31:41] 2024-06-26 18:31:19,062 | INFO     | current memory leak: 100.01 B/s (using 193 data points, chi2=9.18)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | ..............................
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . Timing measurements:
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . get job = 0 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . initial setup = 1 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . payload setup = 6 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . stage-in = 0 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . payload execution = 12697 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . stage-out = 2 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,063 | INFO     | . log creation = 0 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,064 | INFO     | ..............................
[2024-06-26 14:31:41] 2024-06-26 18:31:19,476 | INFO     | 
[2024-06-26 14:31:41] 2024-06-26 18:31:19,476 | INFO     | job summary report
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | --------------------------------------------------
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | PanDA job id: 6245123564
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | task id: 40092531
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | errors: (none)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | pilot state: finished 
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | transexitcode: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | exeerrorcode: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | exeerrordiag: 
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | exitcode: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | exitmsg: OK
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | cpuconsumptiontime: 33898 s
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | nevents: 400
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | neventsw: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | pid: 55496
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | pgrp: 55496
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | corecount: 8
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | event service: False
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | sizes: {0: 2386899, 1: 2387098, 5: 2387304, 11: 2387360, 12708: 2417074, 12710: 2426034, 12712: 2426218, 12725: 2426388}
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | --------------------------------------------------
[2024-06-26 14:31:41] 2024-06-26 18:31:19,477 | INFO     | 
[2024-06-26 14:31:41] 2024-06-26 18:31:19,478 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-06-26 14:31:41] 2024-06-26 18:31:19,498 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | job 6245123564 has completed (purged errors)
[2024-06-26 14:31:41] 2024-06-26 18:31:19,500 | INFO     | overall cleanup function is called
[2024-06-26 14:31:41] 2024-06-26 18:31:20,517 | INFO     | --- collectZombieJob: --- 10, [55496]
[2024-06-26 14:31:41] 2024-06-26 18:31:20,517 | INFO     | zombie collector waiting for pid 55496
[2024-06-26 14:31:41] 2024-06-26 18:31:20,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-26 14:31:41] 2024-06-26 18:31:21,525 | INFO     | collected zombie processes
[2024-06-26 14:31:41] 2024-06-26 18:31:21,525 | INFO     | will now attempt to kill all subprocesses of pid=55496
[2024-06-26 14:31:41] 2024-06-26 18:31:21,525 | INFO     | killing group process 51776
[2024-06-26 14:31:41] 2024-06-26 18:31:21,526 | WARNING  | exception thrown when killing child group process under SIGTERM: [Errno 1] Operation not permitted
[2024-06-26 14:31:41] 2024-06-26 18:31:21,526 | WARNING  | exception thrown when killing child group process with SIGKILL: [Errno 1] Operation not permitted
[2024-06-26 14:31:41] 2024-06-26 18:31:21,698 | INFO     | process IDs to be killed: [55496] (in reverse order)
[2024-06-26 14:31:41] 2024-06-26 18:31:21,815 | WARNING  | found no corresponding commands to process id(s)
[2024-06-26 14:31:41] 2024-06-26 18:31:21,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-26 14:31:41] 2024-06-26 18:31:21,826 | INFO     | did not find any defunct processes belonging to 55496
[2024-06-26 14:31:41] 2024-06-26 18:31:21,836 | INFO     | did not find any defunct processes belonging to 55496
[2024-06-26 14:31:41] 2024-06-26 18:31:21,837 | INFO     | ready for new job
[2024-06-26 14:31:41] 2024-06-26 18:31:21,837 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-26 14:31:41] 2024-06-26 18:31:21,838 | INFO     | *************************************
[2024-06-26 14:31:41] 2024-06-26 18:31:21,838 | INFO     | ***  PanDA Pilot version 3.7.7.3  ***
[2024-06-26 14:31:41] 2024-06-26 18:31:21,838 | INFO     | *************************************
[2024-06-26 14:31:41] 2024-06-26 18:31:21,839 | INFO     | 
[2024-06-26 14:31:41] 2024-06-26 18:31:21,843 | INFO     | architecture information:
[2024-06-26 14:31:41] 2024-06-26 18:31:21,847 | INFO     | executing command: cat /etc/os-release
[2024-06-26 14:31:41] 2024-06-26 18:31:21,881 | INFO     | cat /etc/os-release:
[2024-06-26 14:31:41] NAME="CentOS Linux"
[2024-06-26 14:31:41] VERSION="7 (Core)"
[2024-06-26 14:31:41] ID="centos"
[2024-06-26 14:31:41] ID_LIKE="rhel fedora"
[2024-06-26 14:31:41] VERSION_ID="7"
[2024-06-26 14:31:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-26 14:31:41] ANSI_COLOR="0;31"
[2024-06-26 14:31:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-26 14:31:41] HOME_URL="https://www.centos.org/"
[2024-06-26 14:31:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-26 14:31:41] 
[2024-06-26 14:31:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-26 14:31:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-26 14:31:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-26 14:31:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-26 14:31:41] 
[2024-06-26 14:31:41] 2024-06-26 18:31:21,882 | INFO     | *************************************
[2024-06-26 14:31:41] 2024-06-26 18:31:22,385 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-06-26 14:31:41] 2024-06-26 18:31:22,410 | INFO     | sufficient remaining disk space (100243865600 B)
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | INFO     | found 0 job(s) in 20 queues
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-26 14:31:41] 2024-06-26 18:31:22,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-26 14:31:41] 2024-06-26 18:31:22,763 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-26 14:31:41] 2024-06-26 18:31:22,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-26 14:31:41] 2024-06-26 18:31:22,803 | INFO     | aborting loop
[2024-06-26 14:31:41] 2024-06-26 18:31:23,240 | INFO     | all payload control threads have been joined
[2024-06-26 14:31:41] 2024-06-26 18:31:23,388 | INFO     | all data control threads have been joined
[2024-06-26 14:31:41] 2024-06-26 18:31:23,416 | INFO     | [job] retrieve thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:23,488 | INFO     | all job control threads have been joined
[2024-06-26 14:31:41] 2024-06-26 18:31:23,596 | INFO     | [job] validate thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:23,809 | INFO     | [job] job monitor thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:23,986 | INFO     | [payload] validate_post thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,092 | INFO     | [payload] failed_post thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,100 | INFO     | [job] create_data_payload thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,136 | INFO     | [payload] execute_payloads thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-26 14:31:41] 2024-06-26 18:31:24,246 | INFO     | [payload] control thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,394 | INFO     | [data] control thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,489 | INFO     | [job] control thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,656 | INFO     | [payload] validate_pre thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,768 | INFO     | [data] copytool_out thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:24,819 | INFO     | [data] copytool_in thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:25,162 | INFO     | [job] queue monitor thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:25,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-26 14:31:41] 2024-06-26 18:31:29,917 | INFO     | [data] queue_monitor thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:33,110 | INFO     | job.realtimelogging is not enabled
[2024-06-26 14:31:41] 2024-06-26 18:31:34,116 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-26 14:31:41] 2024-06-26 18:31:36,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686925481792)>', '<ExcThread(monitor, started 140686334613248)>']
[2024-06-26 14:31:41] 2024-06-26 18:31:36,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-26 14:31:41] 2024-06-26 18:31:36,494 | INFO     | [monitor] control thread has ended
[2024-06-26 14:31:41] 2024-06-26 18:31:41,082 | INFO     | all workflow threads have been joined
[2024-06-26 14:31:41] 2024-06-26 18:31:41,082 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-26 14:31:41] 2024-06-26 18:31:41,083 | INFO     | traces error code: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:41,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-26 14:31:41] 2024-06-26 18:31:41,187 [wrapper] ==== pilot stdout END ====
[2024-06-26 14:31:41] 2024-06-26 18:31:41,198 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-26 14:31:41] 2024-06-26 18:31:41,206 [wrapper] pilotpid: 32159
[2024-06-26 14:31:41] 2024-06-26 18:31:41,211 [wrapper] Pilot exit status: 0
[2024-06-26 14:31:41] 2024-06-26 18:31:41,227 [wrapper] pandaids: 6245123564
[2024-06-26 14:31:41] 2024-06-26 18:31:41,300 [wrapper] cleanup supervisor_pilot 23359 32160
[2024-06-26 14:31:41] 2024-06-26 18:31:41,303 [wrapper] Test setup, not cleaning
[2024-06-26 14:31:41] 2024-06-26 18:31:41,310 [wrapper] ==== wrapper stdout END ====
[2024-06-26 14:31:41] 2024-06-26 18:31:41,318 [wrapper] ==== wrapper stderr END ====
[2024-06-26 14:31:41] 2024-06-26 18:31:41,335 [wrapper] apfmon messages muted
[2024-06-26 14:31:41]  *** Error codes and diagnostics ***
[2024-06-26 14:31:41]     "exeErrorCode": 0,
[2024-06-26 14:31:41]     "exeErrorDiag": "",
[2024-06-26 14:31:41]     "pilotErrorCode": 0,
[2024-06-26 14:31:41]     "pilotErrorDiag": "",
[2024-06-26 14:31:41]  *** Listing of results directory ***
[2024-06-26 14:31:41] total 672444
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas    469766 Jun 26 10:53 pilot3.tar.gz
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas      5654 Jun 26 10:56 queuedata.json
[2024-06-26 14:31:41] -rwx------ 1 boincer umatlas     32220 Jun 26 10:56 runpilot2-wrapper.sh
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas       100 Jun 26 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-26 14:31:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun 26 10:58 run_atlas
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas       105 Jun 26 10:58 job.xml
[2024-06-26 14:31:41] drwxrwx--x 2 boincer umatlas      4096 Jun 26 10:58 shared
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas    482492 Jun 26 10:58 input.tar.gz
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas 496689873 Jun 26 10:58 EVNT.40092529._000001.pool.root.1
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 10:58 start_atlas.sh
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas         0 Jun 26 10:58 boinc_lockfile
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas      2645 Jun 26 10:58 pandaJob.out
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas       467 Jun 26 10:58 setup.sh.local
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas   1033150 Jun 26 10:58 agis_schedconf.cvmfs.json
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas   1321363 Jun 26 10:58 cric_ddmendpoints.json
[2024-06-26 14:31:41] drwx------ 4 boincer umatlas      4096 Jun 26 10:58 pilot3
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas      6388 Jun 26 14:28 init_data.xml
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas 185368624 Jun 26 14:30 HITS.40092531._000004.pool.root.1
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas       531 Jun 26 14:30 boinc_task_state.xml
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas        95 Jun 26 14:30 pilot_heartbeat.json
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas      1095 Jun 26 14:30 memory_monitor_summary.json
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas         0 Jun 26 14:31 agis_ddmendpoints.agis.ALL.json
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas    367659 Jun 26 14:31 log.40092531._000004.job.log.tgz.1
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas      7732 Jun 26 14:31 heartbeat.json
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas        28 Jun 26 14:31 wrapper_checkpoint.txt
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas      4407 Jun 26 14:31 pilotlog.txt
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas      8192 Jun 26 14:31 boinc_mmap_file
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas   1120641 Jun 26 14:31 log.40092531._000004.job.log.1
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas       357 Jun 26 14:31 output.list
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas       620 Jun 26 14:31 runtime_log
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas   1505280 Jun 26 14:31 result.tar.gz
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas     11400 Jun 26 14:31 runtime_log.err
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas       650 Jun 26 14:31 IGNODmlFjg5n7Olcko1bjSoqABFKDmABFKDmOtvXDmjvrKDmIqvLnn.diag
[2024-06-26 14:31:41] -rw-r--r-- 1 boincer umatlas     21955 Jun 26 14:31 stderr.txt
[2024-06-26 14:31:41] HITS file was successfully produced:
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas 185368624 Jun 26 14:30 shared/HITS.pool.root.1
[2024-06-26 14:31:41]  *** Contents of shared directory: ***
[2024-06-26 14:31:41] total 668052
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas    482492 Jun 26 10:58 input.tar.gz
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas 496689873 Jun 26 10:58 ATLAS.root_0
[2024-06-26 14:31:41] -rw-r--r-- 2 boincer umatlas     17537 Jun 26 10:58 start_atlas.sh
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas 185368624 Jun 26 14:30 HITS.pool.root.1
[2024-06-26 14:31:41] -rw------- 1 boincer umatlas   1505280 Jun 26 14:31 result.tar.gz
14:31:42 (24978): run_atlas exited; CPU time 32903.910852
14:31:42 (24978): called boinc_finish(0)

</stderr_txt>
]]>

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